RNA–Protein interactions for RNA: YHR053C

CUP1-1, Transcript of Metallothionein, yeastyeast

Gene CUP1-1, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-1YHR053C ERV2Q12284 196 aa3.59□□□□□ -1.83
CUP1-1YHR053C RRD2Q12461 358 aa3.59□□□□□ -1.83
CUP1-1YHR053C YLR278CQ05854 1341 aa3.59□□□□□ -1.83
CUP1-1YHR053C HIS4P00815 799 aaKnown RBP3.58□□□□□ -1.84
CUP1-1YHR053C CLC1P17891 233 aa3.58□□□□□ -1.84
CUP1-1YHR053C RPI1P23250 407 aaKnown RBP3.58□□□□□ -1.84
CUP1-1YHR053C CLB3P24870 427 aa3.58□□□□□ -1.84
CUP1-1YHR053C HXT3P32466 567 aaKnown RBP3.58□□□□□ -1.84
CUP1-1YHR053C PRP21P32524 280 aaPredicted RBP3.58□□□□□ -1.84
CUP1-1YHR053C ECM25P32525 599 aa3.58□□□□□ -1.84
CUP1-1YHR053C HCS1P34243 683 aa3.58□□□□□ -1.84
CUP1-1YHR053C STB6P36085 766 aa3.58□□□□□ -1.84
CUP1-1YHR053C RIB5P38145 238 aa3.58□□□□□ -1.84
CUP1-1YHR053C MIX23P38162 196 aa3.58□□□□□ -1.84
CUP1-1YHR053C PTH1P38876 190 aaKnown RBP3.58□□□□□ -1.84
CUP1-1YHR053C OST1P41543 476 aaKnown RBP3.58□□□□□ -1.84
CUP1-1YHR053C VMA13P41807 478 aaKnown RBP3.58□□□□□ -1.84
CUP1-1YHR053C FMS1P50264 508 aa3.58□□□□□ -1.84
CUP1-1YHR053C YIF1P53845 314 aaKnown RBP3.58□□□□□ -1.84
CUP1-1YHR053C TSR1Q07381 788 aaKnown RBP3.58□□□□□ -1.84
CUP1-1YHR053C RTN2Q12443 393 aa3.58□□□□□ -1.84
CUP1-1YHR053C LDB16P25587 256 aa3.57□□□□□ -1.84
CUP1-1YHR053C TIP1P27654 210 aaPredicted RBP3.57□□□□□ -1.84
CUP1-1YHR053C YIM1P28625 365 aa3.57□□□□□ -1.84
CUP1-1YHR053C YEL045CP32616 141 aa3.57□□□□□ -1.84
CUP1-1YHR053C SWE1P32944 819 aa3.57□□□□□ -1.84
CUP1-1YHR053C ARA1P38115 344 aa3.57□□□□□ -1.84
CUP1-1YHR053C RFS1P38234 210 aaKnown RBP3.57□□□□□ -1.84
CUP1-1YHR053C YHR054CP38780 354 aa3.57□□□□□ -1.84
CUP1-1YHR053C CCT2P39076 527 aaKnown RBP3.57□□□□□ -1.84
CUP1-1YHR053C MST28P39552 234 aa3.57□□□□□ -1.84
CUP1-1YHR053C DLD2P46681 530 aaKnown RBP3.57□□□□□ -1.84
CUP1-1YHR053C TOF1P53840 1238 aa3.57□□□□□ -1.84
CUP1-1YHR053C MDG1P53885 366 aa3.57□□□□□ -1.84
CUP1-1YHR053C TIM18Q08749 192 aa3.57□□□□□ -1.84
CUP1-1YHR053C MRPL4P36517 319 aa3.56□□□□□ -1.84
CUP1-1YHR053C NCA3P46955 337 aa3.56□□□□□ -1.84
CUP1-1YHR053C MDM1Q01846 1127 aa3.56□□□□□ -1.84
CUP1-1YHR053C VPS72Q03388 795 aa3.56□□□□□ -1.84
CUP1-1YHR053C TAF11Q04226 346 aa3.56□□□□□ -1.84
CUP1-1YHR053C SIL1Q08199 421 aa3.56□□□□□ -1.84
CUP1-1YHR053C HSP42Q12329 375 aa3.56□□□□□ -1.84
CUP1-1YHR053C CDC31P06704 161 aaKnown RBP3.55□□□□□ -1.84
CUP1-1YHR053C RIP1P08067 215 aa3.55□□□□□ -1.84
CUP1-1YHR053C SRV2P17555 526 aaKnown RBP3.55□□□□□ -1.84
CUP1-1YHR053C KTR5P53966 522 aaPredicted RBP3.55□□□□□ -1.84
CUP1-1YHR053C RRP45Q05636 305 aaKnown RBP3.55□□□□□ -1.84
CUP1-1YHR053C YLR287CQ05881 355 aa3.55□□□□□ -1.84
CUP1-1YHR053C REX4Q08237 289 aa3.55□□□□□ -1.84
CUP1-1YHR053C YPR022CQ12139 1133 aa3.55□□□□□ -1.84
CUP1-1YHR053C SFI1Q12369 946 aa3.55□□□□□ -1.84
CUP1-1YHR053C RAD61Q99359 647 aa3.55□□□□□ -1.84
CUP1-1YHR053C ARG4P04076 463 aaPredicted RBP3.54□□□□□ -1.84
CUP1-1YHR053C SAS3P34218 831 aa3.54□□□□□ -1.84
CUP1-1YHR053C JNM1P36224 373 aa3.54□□□□□ -1.84
CUP1-1YHR053C NTC20P38302 140 aaPredicted RBP3.54□□□□□ -1.84
CUP1-1YHR053C MTC6P38849 526 aa3.54□□□□□ -1.84
CUP1-1YHR053C LYS1P38998 373 aaRIP-Chip data3.54□□□□□ -1.84not detected
CUP1-1YHR053C PRM5P40476 318 aa3.54□□□□□ -1.84
CUP1-1YHR053C REE1P40893 198 aa3.54□□□□□ -1.84
CUP1-1YHR053C SDT1P53078 280 aa3.54□□□□□ -1.84
CUP1-1YHR053C FRE4P53746 719 aa3.54□□□□□ -1.84
CUP1-1YHR053C RPA49Q01080 415 aaPredicted RBP3.54□□□□□ -1.84
CUP1-1YHR053C YMR181CQ03231 154 aa3.54□□□□□ -1.84
CUP1-1YHR053C ADD37Q03233 198 aa3.54□□□□□ -1.84
CUP1-1YHR053C SYF1Q04048 859 aaPredicted RBP3.54□□□□□ -1.84
CUP1-1YHR053C SGT1Q08446 395 aa3.54□□□□□ -1.84
CUP1-1YHR053C TMS1Q12116 473 aa3.54□□□□□ -1.84
CUP1-1YHR053C TEF1P02994 458 aaKnown RBP3.53□□□□□ -1.84
CUP1-1YHR053C REC107P21651 314 aa3.53□□□□□ -1.84
CUP1-1YHR053C ERG3P32353 365 aa3.53□□□□□ -1.84
CUP1-1YHR053C FAA2P39518 744 aa3.53□□□□□ -1.84
CUP1-1YHR053C PRE5P40302 234 aaKnown RBP3.53□□□□□ -1.84
CUP1-1YHR053C SAS2P40963 338 aa3.53□□□□□ -1.84
CUP1-1YHR053C SRB7P47822 140 aa3.53□□□□□ -1.84
CUP1-1YHR053C HER2Q03557 464 aa3.53□□□□□ -1.84
CUP1-1YHR053C PPM1Q04081 328 aa3.53□□□□□ -1.84
CUP1-1YHR053C RRG7Q08774 242 aaPredicted RBP3.53□□□□□ -1.84
CUP1-1YHR053C PET123P17558 318 aa3.52□□□□□ -1.85
CUP1-1YHR053C DAL2P25335 343 aa3.52□□□□□ -1.85
CUP1-1YHR053C RML2P32611 393 aa3.52□□□□□ -1.85
CUP1-1YHR053C RPS0BP46654 252 aaKnown RBP3.52□□□□□ -1.85
CUP1-1YHR053C YJR011CP47086 261 aaPredicted RBP3.52□□□□□ -1.85
CUP1-1YHR053C HMS2P47175 358 aa3.52□□□□□ -1.85
CUP1-1YHR053C YNR048WP53740 393 aa3.52□□□□□ -1.85
CUP1-1YHR053C HRI1Q05905 244 aaKnown RBP3.52□□□□□ -1.85
CUP1-1YHR053C YOL159C-AQ3E769 90 aa3.52□□□□□ -1.85
CUP1-1YHR053C SLY1P22213 666 aa3.51□□□□□ -1.85
CUP1-1YHR053C PIM1P36775 1133 aa3.51□□□□□ -1.85
CUP1-1YHR053C NOC2P39744 710 aaKnown RBP3.51□□□□□ -1.85
CUP1-1YHR053C YGL138CP53122 345 aa3.51□□□□□ -1.85
CUP1-1YHR053C MRPL35Q06678 367 aa3.51□□□□□ -1.85
CUP1-1YHR053C SNX3Q08826 162 aaKnown RBP3.51□□□□□ -1.85
CUP1-1YHR053C SCM3Q12334 223 aa3.51□□□□□ -1.85
CUP1-1YHR053C CLN3P13365 580 aa3.5□□□□□ -1.85
CUP1-1YHR053C SPO7P18410 259 aa3.5□□□□□ -1.85
CUP1-1YHR053C FUR1P18562 216 aaKnown RBP3.5□□□□□ -1.85
CUP1-1YHR053C LSB5P25369 354 aa3.5□□□□□ -1.85
CUP1-1YHR053C KRE2P27809 442 aa3.5□□□□□ -1.85
CUP1-1YHR053C SIN4P32259 974 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms