RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W IMA1P53051 589 aa5.72□□□□□ -1.49
SKN1YGR143W CUE3P53137 624 aaKnown RBP5.72□□□□□ -1.49
SKN1YGR143W ART5P53244 586 aaKnown RBP5.72□□□□□ -1.49
SKN1YGR143W RRN9P53437 365 aa5.72□□□□□ -1.49
SKN1YGR143W EBS1Q03466 884 aaKnown RBP5.72□□□□□ -1.49
SKN1YGR143W CDA2Q06703 312 aa5.72□□□□□ -1.49
SKN1YGR143W FLC1Q08967 793 aa5.72□□□□□ -1.49
SKN1YGR143W YDR056CQ12025 205 aa5.72□□□□□ -1.49
SKN1YGR143W SUT2Q12286 268 aa5.72□□□□□ -1.49
SKN1YGR143W ERP3Q12403 225 aa5.72□□□□□ -1.49
SKN1YGR143W RPP2AP05319 106 aaKnown RBP5.71□□□□□ -1.49
SKN1YGR143W DST1P07273 309 aa5.71□□□□□ -1.49
SKN1YGR143W SPO11P23179 398 aa5.71□□□□□ -1.49
SKN1YGR143W MCR1P36060 302 aaKnown RBP5.71□□□□□ -1.49
SKN1YGR143W POP4P38336 279 aa5.71□□□□□ -1.49
SKN1YGR143W YBR259WP38338 688 aa5.71□□□□□ -1.49
SKN1YGR143W SCC4P40090 624 aa5.71□□□□□ -1.49
SKN1YGR143W FAU1P40099 211 aa5.71□□□□□ -1.49
SKN1YGR143W OCA2P53949 197 aa5.71□□□□□ -1.49
SKN1YGR143W FRA1Q07825 749 aa5.71□□□□□ -1.49
SKN1YGR143W CWC2Q12046 339 aaPredicted RBP5.71□□□□□ -1.49
SKN1YGR143W YPR063CQ12160 140 aa5.71□□□□□ -1.49
SKN1YGR143W SVS1Q12254 260 aa5.71□□□□□ -1.49
SKN1YGR143W Q0144Q9ZZW2 109 aa5.71□□□□□ -1.49
SKN1YGR143W HTB1P02293 131 aaKnown RBP5.71□□□□□ -1.5
SKN1YGR143W HTB2P02294 131 aa5.71□□□□□ -1.5
SKN1YGR143W SIR1P21691 654 aa5.71□□□□□ -1.5
SKN1YGR143W AMS1P22855 1083 aa5.71□□□□□ -1.5
SKN1YGR143W SED4P25365 1065 aa5.71□□□□□ -1.5
SKN1YGR143W YUR1P26725 428 aa5.71□□□□□ -1.5
SKN1YGR143W RGT1P32862 1170 aa5.71□□□□□ -1.5
SKN1YGR143W MRPL3P36516 390 aa5.71□□□□□ -1.5
SKN1YGR143W APN2P38207 520 aa5.71□□□□□ -1.5
SKN1YGR143W YBR137WP38276 179 aa5.71□□□□□ -1.5
SKN1YGR143W MAD2P40958 196 aa5.71□□□□□ -1.5
SKN1YGR143W GAB1P41733 394 aa5.71□□□□□ -1.5
SKN1YGR143W SIP4P46954 829 aa5.71□□□□□ -1.5
SKN1YGR143W SCY1P53009 804 aa5.71□□□□□ -1.5
SKN1YGR143W GTF1P53260 183 aaPredicted RBP5.71□□□□□ -1.5
SKN1YGR143W YOR238WQ08634 303 aa5.71□□□□□ -1.5
SKN1YGR143W MCH5Q08777 521 aa5.71□□□□□ -1.5
SKN1YGR143W AFT2Q08957 416 aa5.71□□□□□ -1.5
SKN1YGR143W BMT6Q12291 365 aa5.71□□□□□ -1.5
SKN1YGR143W WIP1Q2V2P8 89 aa5.71□□□□□ -1.5
SKN1YGR143W CIT1P00890 479 aa5.7□□□□□ -1.5
SKN1YGR143W HOP1P20050 605 aa5.7□□□□□ -1.5
SKN1YGR143W HCM1P25364 564 aa5.7□□□□□ -1.5
SKN1YGR143W MCM10P32354 571 aa5.7□□□□□ -1.5
SKN1YGR143W EAP1P36041 632 aaKnown RBP5.7□□□□□ -1.5
SKN1YGR143W MAP2P38174 421 aaKnown RBP5.7□□□□□ -1.5
SKN1YGR143W SHG1P38337 142 aa5.7□□□□□ -1.5
SKN1YGR143W GOS1P38736 223 aa5.7□□□□□ -1.5
SKN1YGR143W CEM1P39525 442 aa5.7□□□□□ -1.5
SKN1YGR143W EXO1P39875 702 aa5.7□□□□□ -1.5
SKN1YGR143W VAC8P39968 578 aa5.7□□□□□ -1.5
SKN1YGR143W MSS2P40990 351 aa5.7□□□□□ -1.5
SKN1YGR143W SNG1P46950 547 aa5.7□□□□□ -1.5
SKN1YGR143W PUS4P48567 403 aaKnown RBP5.7□□□□□ -1.5
SKN1YGR143W ERV14P53173 138 aa5.7□□□□□ -1.5
SKN1YGR143W EOS1P53938 366 aa5.7□□□□□ -1.5
SKN1YGR143W YCL001W-AP87012 153 aa5.7□□□□□ -1.5
SKN1YGR143W NHX1Q04121 633 aa5.7□□□□□ -1.5
SKN1YGR143W YMR321CQ04898 105 aa5.7□□□□□ -1.5
SKN1YGR143W COQ9Q05779 260 aa5.7□□□□□ -1.5
SKN1YGR143W CYK3Q07533 885 aa5.7□□□□□ -1.5
SKN1YGR143W SYC1Q08553 188 aaPredicted RBP5.7□□□□□ -1.5
SKN1YGR143W AGC1Q12482 902 aa5.7□□□□□ -1.5
SKN1YGR143W GAL4P04386 881 aa5.7□□□□□ -1.5
SKN1YGR143W RAD7P06779 565 aa5.7□□□□□ -1.5
SKN1YGR143W YFR010W-AP0C5N0 62 aa5.7□□□□□ -1.5
SKN1YGR143W LDS1P31379 325 aa5.7□□□□□ -1.5
SKN1YGR143W CBT1P36038 271 aaPredicted RBP5.7□□□□□ -1.5
SKN1YGR143W GPP1P41277 250 aaKnown RBP5.7□□□□□ -1.5
SKN1YGR143W LSB6P42951 607 aa5.7□□□□□ -1.5
SKN1YGR143W RPS12P48589 143 aaKnown RBP5.7□□□□□ -1.5
SKN1YGR143W NBP35P52920 328 aa5.7□□□□□ -1.5
SKN1YGR143W YGL204CP53089 101 aa5.7□□□□□ -1.5
SKN1YGR143W TPN1P53099 579 aa5.7□□□□□ -1.5
SKN1YGR143W SLD3P53135 668 aa5.7□□□□□ -1.5
SKN1YGR143W SSU72P53538 206 aaPredicted RBP5.7□□□□□ -1.5
SKN1YGR143W CPR6P53691 371 aaKnown RBP5.7□□□□□ -1.5
SKN1YGR143W COG5P53951 403 aa5.7□□□□□ -1.5
SKN1YGR143W SKY1Q03656 742 aa5.7□□□□□ -1.5
SKN1YGR143W SPR28Q04921 423 aa5.7□□□□□ -1.5
SKN1YGR143W THI21Q08975 551 aa5.7□□□□□ -1.5
SKN1YGR143W RRD2Q12461 358 aa5.7□□□□□ -1.5
SKN1YGR143W UBR1P19812 1950 aa5.69□□□□□ -1.5
SKN1YGR143W CDC28P00546 298 aaKnown RBP5.69□□□□□ -1.5
SKN1YGR143W PHO4P07270 312 aaKnown RBP5.69□□□□□ -1.5
SKN1YGR143W COS2P0CX12 379 aa5.69□□□□□ -1.5
SKN1YGR143W COS3P0CX13 379 aa5.69□□□□□ -1.5
SKN1YGR143W RFA1P22336 621 aaKnown RBP5.69□□□□□ -1.5
SKN1YGR143W TKL1P23254 680 aaKnown RBP5.69□□□□□ -1.5
SKN1YGR143W PTP2P29461 750 aa5.69□□□□□ -1.5
SKN1YGR143W ERG1P32476 496 aaKnown RBP5.69□□□□□ -1.5
SKN1YGR143W NUP2P32499 720 aa5.69□□□□□ -1.5
SKN1YGR143W RPC25P35718 212 aa5.69□□□□□ -1.5
SKN1YGR143W LDH1P38139 375 aa5.69□□□□□ -1.5
SKN1YGR143W YBR032WP38223 100 aa5.69□□□□□ -1.5
SKN1YGR143W REG2P38232 338 aa5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms