RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W YBL059WP34224 193 aa1.29□□□□□ -2.2
CUL3YGR003W PIM1P36775 1133 aa1.29□□□□□ -2.2
CUL3YGR003W MSG5P38590 489 aa1.29□□□□□ -2.2
CUL3YGR003W YHR131CP38835 850 aa1.29□□□□□ -2.2
CUL3YGR003W SIM1P40472 476 aa1.29□□□□□ -2.2
CUL3YGR003W REE1P40893 198 aa1.29□□□□□ -2.2
CUL3YGR003W SAS2P40963 338 aa1.29□□□□□ -2.2
CUL3YGR003W RQC1Q05468 723 aaKnown RBP1.29□□□□□ -2.2
CUL3YGR003W RAD57P25301 460 aa1.28□□□□□ -2.2
CUL3YGR003W ECM25P32525 599 aa1.28□□□□□ -2.2
CUL3YGR003W RSM22P36056 628 aa1.28□□□□□ -2.2
CUL3YGR003W PTH1P38876 190 aaKnown RBP1.28□□□□□ -2.2
CUL3YGR003W NCA3P46955 337 aa1.28□□□□□ -2.2
CUL3YGR003W MTM1P53320 366 aa1.28□□□□□ -2.2
CUL3YGR003W OGG1P53397 376 aaPredicted RBP1.28□□□□□ -2.2
CUL3YGR003W FRE4P53746 719 aa1.28□□□□□ -2.2
CUL3YGR003W MRPL19P53875 158 aa1.28□□□□□ -2.2
CUL3YGR003W PNG1Q02890 363 aa1.28□□□□□ -2.2
CUL3YGR003W RRG7Q08774 242 aaPredicted RBP1.28□□□□□ -2.2
CUL3YGR003W YPL199CQ08954 240 aa1.28□□□□□ -2.2
CUL3YGR003W RIM20Q12033 661 aa1.28□□□□□ -2.2
CUL3YGR003W ORT1Q12375 292 aa1.28□□□□□ -2.2
CUL3YGR003W RTN2Q12443 393 aa1.28□□□□□ -2.2
CUL3YGR003W YAR066WP0CX18 203 aa1.28□□□□□ -2.2
CUL3YGR003W YHR214WP0CX19 203 aa1.28□□□□□ -2.2
CUL3YGR003W SLY1P22213 666 aa1.28□□□□□ -2.2
CUL3YGR003W TIP1P27654 210 aaPredicted RBP1.28□□□□□ -2.2
CUL3YGR003W RAD14P28519 371 aa1.28□□□□□ -2.2
CUL3YGR003W SPR1P32603 445 aa1.28□□□□□ -2.2
CUL3YGR003W YBP1P38315 674 aa1.28□□□□□ -2.2
CUL3YGR003W MTC6P38849 526 aa1.28□□□□□ -2.2
CUL3YGR003W PRM5P40476 318 aa1.28□□□□□ -2.2
CUL3YGR003W WWM1P43582 211 aaKnown RBP1.28□□□□□ -2.2
CUL3YGR003W YIF1P53845 314 aaKnown RBP1.28□□□□□ -2.2
CUL3YGR003W SOV1Q04748 898 aa1.28□□□□□ -2.2
CUL3YGR003W RMD5Q12508 421 aa1.28□□□□□ -2.2
CUL3YGR003W RAD61Q99359 647 aa1.28□□□□□ -2.2
CUL3YGR003W TRP1P00912 224 aa1.27□□□□□ -2.21
CUL3YGR003W RML2P32611 393 aa1.27□□□□□ -2.21
CUL3YGR003W RIB5P38145 238 aa1.27□□□□□ -2.21
CUL3YGR003W PAN6P40459 309 aa1.27□□□□□ -2.21
CUL3YGR003W YGR210CP42942 411 aa1.27□□□□□ -2.21
CUL3YGR003W YFL067WP43537 175 aa1.27□□□□□ -2.21
CUL3YGR003W URB2P47108 1174 aa1.27□□□□□ -2.21
CUL3YGR003W YLR152CP54072 576 aa1.27□□□□□ -2.21
CUL3YGR003W MRP51Q02950 344 aa1.27□□□□□ -2.21
CUL3YGR003W HSP31Q04432 237 aa1.27□□□□□ -2.21
CUL3YGR003W RTP1Q12751 981 aa1.27□□□□□ -2.21
CUL3YGR003W BRR1Q99177 341 aaPredicted RBP1.27□□□□□ -2.21
CUL3YGR003W SOD1P00445 154 aaKnown RBP1.27□□□□□ -2.21
CUL3YGR003W RHO2P06781 192 aa1.27□□□□□ -2.21
CUL3YGR003W NFT1P0CE68 1218 aa1.27□□□□□ -2.21
CUL3YGR003W MRP7P12687 371 aa1.27□□□□□ -2.21
CUL3YGR003W RPI1P23250 407 aaKnown RBP1.27□□□□□ -2.21
CUL3YGR003W SIN4P32259 974 aa1.27□□□□□ -2.21
CUL3YGR003W APE2P32454 952 aaKnown RBP1.27□□□□□ -2.21
CUL3YGR003W HXT1P32465 570 aa1.27□□□□□ -2.21
CUL3YGR003W LSM5P40089 93 aaKnown RBP1.27□□□□□ -2.21
CUL3YGR003W PHB2P50085 310 aa1.27□□□□□ -2.21
CUL3YGR003W YGL242CP53066 181 aa1.27□□□□□ -2.21
CUL3YGR003W PPM1Q04081 328 aa1.27□□□□□ -2.21
CUL3YGR003W FDH1Q08911 376 aa1.27□□□□□ -2.21
CUL3YGR003W YLR108CQ12259 485 aa1.27□□□□□ -2.21
CUL3YGR003W CTR86P25355 563 aa1.26□□□□□ -2.21
CUL3YGR003W STB6P36085 766 aa1.26□□□□□ -2.21
CUL3YGR003W GPD2P41911 440 aaKnown RBP1.26□□□□□ -2.21
CUL3YGR003W LAM5P43560 674 aa1.26□□□□□ -2.21
CUL3YGR003W BRO1P48582 844 aa1.26□□□□□ -2.21
CUL3YGR003W IBD2P53892 351 aa1.26□□□□□ -2.21
CUL3YGR003W NCS2P53923 493 aaPredicted RBP1.26□□□□□ -2.21
CUL3YGR003W TSA2Q04120 196 aa1.26□□□□□ -2.21
CUL3YGR003W SNT309Q06091 175 aaPredicted RBP1.26□□□□□ -2.21
CUL3YGR003W COG4Q06096 861 aa1.26□□□□□ -2.21
CUL3YGR003W TIM18Q08749 192 aa1.26□□□□□ -2.21
CUL3YGR003W COX3P00420 269 aa1.25□□□□□ -2.21
CUL3YGR003W HHF1P02309 103 aaKnown RBP1.25□□□□□ -2.21
CUL3YGR003W SPS4P09937 338 aa1.25□□□□□ -2.21
CUL3YGR003W SPO12P17123 173 aa1.25□□□□□ -2.21
CUL3YGR003W BEM1P29366 551 aa1.25□□□□□ -2.21
CUL3YGR003W YKL097CP34245 136 aa1.25□□□□□ -2.21
CUL3YGR003W SOR1P35497 357 aaKnown RBP1.25□□□□□ -2.21
CUL3YGR003W VHC1P38329 1120 aa1.25□□□□□ -2.21
CUL3YGR003W RRP4P38792 359 aaKnown RBP1.25□□□□□ -2.21
CUL3YGR003W ARF3P40994 183 aaRIP-Chip data1.25□□□□□ -2.21not detected
CUL3YGR003W VTC2P43585 828 aa1.25□□□□□ -2.21
CUL3YGR003W DLD2P46681 530 aaKnown RBP1.25□□□□□ -2.21
CUL3YGR003W YNR048WP53740 393 aa1.25□□□□□ -2.21
CUL3YGR003W HRI1Q05905 244 aaKnown RBP1.25□□□□□ -2.21
CUL3YGR003W SOR2Q07786 357 aa1.25□□□□□ -2.21
CUL3YGR003W SNX3Q08826 162 aaKnown RBP1.25□□□□□ -2.21
CUL3YGR003W RED1P14291 827 aa1.25□□□□□ -2.21
CUL3YGR003W RHB1P25378 209 aa1.25□□□□□ -2.21
CUL3YGR003W CRM1P30822 1084 aaKnown RBP1.25□□□□□ -2.21
CUL3YGR003W KAR9P32526 644 aa1.25□□□□□ -2.21
CUL3YGR003W PAD1P33751 242 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
CUL3YGR003W LYS1P38998 373 aaRIP-Chip data1.25□□□□□ -2.21not detected
CUL3YGR003W RPS0BP46654 252 aaKnown RBP1.25□□□□□ -2.21
CUL3YGR003W RMD9P53140 646 aaKnown RBP1.25□□□□□ -2.21
CUL3YGR003W BTN2P53286 410 aa1.25□□□□□ -2.21
CUL3YGR003W YMR155WQ03795 547 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms