RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W PDB1P32473 366 aaKnown RBP5.15□□□□□ -1.59
PDE1YGL248W SRB5P32585 307 aa5.15□□□□□ -1.59
PDE1YGL248W RAD23P32628 398 aaKnown RBP5.15□□□□□ -1.59
PDE1YGL248W IMP3P32899 183 aaPredicted RBP5.15□□□□□ -1.59
PDE1YGL248W ECT1P33412 323 aa5.15□□□□□ -1.59
PDE1YGL248W PAD1P33751 242 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
PDE1YGL248W AST1P35183 429 aa5.15□□□□□ -1.59
PDE1YGL248W DOA1P36037 715 aa5.15□□□□□ -1.59
PDE1YGL248W CHK1P38147 527 aa5.15□□□□□ -1.59
PDE1YGL248W FES1P38260 290 aa5.15□□□□□ -1.59
PDE1YGL248W APD1P38281 316 aa5.15□□□□□ -1.59
PDE1YGL248W ERG7P38604 731 aa5.15□□□□□ -1.59
PDE1YGL248W YJL193WP39542 402 aa5.15□□□□□ -1.59
PDE1YGL248W SOP4P39543 234 aaPredicted RBP5.15□□□□□ -1.59
PDE1YGL248W SOK1P40317 901 aa5.15□□□□□ -1.59
PDE1YGL248W VHS2P40463 436 aa5.15□□□□□ -1.59
PDE1YGL248W SAD1P43589 448 aa5.15□□□□□ -1.59
PDE1YGL248W AIM22P47051 409 aa5.15□□□□□ -1.59
PDE1YGL248W RRN9P53437 365 aa5.15□□□□□ -1.59
PDE1YGL248W EAF7P53911 425 aaKnown RBP5.15□□□□□ -1.59
PDE1YGL248W ADE16P54113 591 aaKnown RBP5.15□□□□□ -1.59
PDE1YGL248W PEX12Q04370 399 aa5.15□□□□□ -1.59
PDE1YGL248W CDD1Q06549 142 aa5.15□□□□□ -1.59
PDE1YGL248W YDL114WQ07530 308 aa5.15□□□□□ -1.59
PDE1YGL248W PAM18Q07914 168 aa5.15□□□□□ -1.59
PDE1YGL248W RAX1Q08760 435 aa5.15□□□□□ -1.59
PDE1YGL248W RLM1Q12224 676 aa5.15□□□□□ -1.59
PDE1YGL248W RRP12Q12754 1228 aaKnown RBP5.15□□□□□ -1.59
PDE1YGL248W MF(ALPHA)1P01149 165 aa5.14□□□□□ -1.59
PDE1YGL248W RAD1P06777 1100 aa5.14□□□□□ -1.59
PDE1YGL248W MATALPHA1P0CY06 175 aa5.14□□□□□ -1.59
PDE1YGL248W HMLALPHA1P0CY07 175 aa5.14□□□□□ -1.59
PDE1YGL248W ERG11P10614 530 aa5.14□□□□□ -1.59
PDE1YGL248W FBA1P14540 359 aaKnown RBP5.14□□□□□ -1.59
PDE1YGL248W POL30P15873 258 aaKnown RBP5.14□□□□□ -1.59
PDE1YGL248W VPS1P21576 704 aaKnown RBP5.14□□□□□ -1.59
PDE1YGL248W YSR3P23501 404 aa5.14□□□□□ -1.59
PDE1YGL248W PEX3P28795 441 aa5.14□□□□□ -1.59
PDE1YGL248W CTS1P29029 562 aa5.14□□□□□ -1.59
PDE1YGL248W PRE4P30657 266 aa5.14□□□□□ -1.59
PDE1YGL248W LHS1P36016 881 aa5.14□□□□□ -1.59
PDE1YGL248W SHC1P39000 512 aa5.14□□□□□ -1.59
PDE1YGL248W SEC24P40482 926 aaKnown RBP5.14□□□□□ -1.59
PDE1YGL248W ERG10P41338 398 aaKnown RBP5.14□□□□□ -1.59
PDE1YGL248W TOS3P43637 560 aa5.14□□□□□ -1.59
PDE1YGL248W YJL118WP47022 219 aa5.14□□□□□ -1.59
PDE1YGL248W RFX1P48743 811 aa5.14□□□□□ -1.59
PDE1YGL248W VMA10P48836 114 aaKnown RBP5.14□□□□□ -1.59
PDE1YGL248W IMD4P50094 524 aaKnown RBP5.14□□□□□ -1.59
PDE1YGL248W TAM41P53230 385 aa5.14□□□□□ -1.59
PDE1YGL248W TNA1P53322 534 aa5.14□□□□□ -1.59
PDE1YGL248W NOP13P53883 403 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
PDE1YGL248W YDR541CQ03049 344 aa5.14□□□□□ -1.59
PDE1YGL248W RCR2Q03446 210 aaKnown RBP5.14□□□□□ -1.59
PDE1YGL248W YMR209CQ03648 457 aa5.14□□□□□ -1.59
PDE1YGL248W YDR132CQ03900 495 aa5.14□□□□□ -1.59
PDE1YGL248W DCR2Q05924 578 aa5.14□□□□□ -1.59
PDE1YGL248W DCS1Q06151 350 aa5.14□□□□□ -1.59
PDE1YGL248W YLR040CQ07988 224 aa5.14□□□□□ -1.59
PDE1YGL248W RCL1Q08096 367 aaPredicted RBP5.14□□□□□ -1.59
PDE1YGL248W SIL1Q08199 421 aa5.14□□□□□ -1.59
PDE1YGL248W SGO1Q08490 590 aa5.14□□□□□ -1.59
PDE1YGL248W CDC33P07260 213 aaKnown RBP5.13□□□□□ -1.59
PDE1YGL248W PYC1P11154 1178 aaKnown RBP5.13□□□□□ -1.59
PDE1YGL248W CBF1P17106 351 aa5.13□□□□□ -1.59
PDE1YGL248W MET16P18408 261 aaPredicted RBP5.13□□□□□ -1.59
PDE1YGL248W PRP4P20053 465 aaKnown RBP5.13□□□□□ -1.59
PDE1YGL248W MGR1P25573 417 aa5.13□□□□□ -1.59
PDE1YGL248W GSY2P27472 705 aa5.13□□□□□ -1.59
PDE1YGL248W RIM1P32445 135 aaKnown RBP5.13□□□□□ -1.59
PDE1YGL248W SPO23P33757 523 aa5.13□□□□□ -1.59
PDE1YGL248W SNU114P36048 1008 aaKnown RBP5.13□□□□□ -1.59
PDE1YGL248W CAF4P36130 643 aa5.13□□□□□ -1.59
PDE1YGL248W SIC1P38634 284 aa5.13□□□□□ -1.59
PDE1YGL248W GID8P40208 455 aa5.13□□□□□ -1.59
PDE1YGL248W YMR147WP40218 223 aaKnown RBP5.13□□□□□ -1.59
PDE1YGL248W PHB1P40961 287 aa5.13□□□□□ -1.59
PDE1YGL248W CDC40P40968 455 aaPredicted RBP5.13□□□□□ -1.59
PDE1YGL248W STB2P46679 850 aa5.13□□□□□ -1.59
PDE1YGL248W DPB11P47027 764 aaPredicted RBP5.13□□□□□ -1.59
PDE1YGL248W NPA3P47122 385 aa5.13□□□□□ -1.59
PDE1YGL248W MTR3P48240 250 aaPredicted RBP5.13□□□□□ -1.59
PDE1YGL248W SPT20P50875 604 aa5.13□□□□□ -1.59
PDE1YGL248W RAI1P53063 387 aaKnown RBP5.13□□□□□ -1.59
PDE1YGL248W YGL159WP53110 370 aa5.13□□□□□ -1.59
PDE1YGL248W EBS1Q03466 884 aaKnown RBP5.13□□□□□ -1.59
PDE1YGL248W COX20Q04935 205 aa5.13□□□□□ -1.59
PDE1YGL248W STP3Q05937 343 aa5.13□□□□□ -1.59
PDE1YGL248W DUS4Q06063 367 aa5.13□□□□□ -1.59
PDE1YGL248W MRPL35Q06678 367 aa5.13□□□□□ -1.59
PDE1YGL248W CRT10Q08226 957 aa5.13□□□□□ -1.59
PDE1YGL248W REX4Q08237 289 aa5.13□□□□□ -1.59
PDE1YGL248W AIM41Q12032 185 aa5.13□□□□□ -1.59
PDE1YGL248W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
PDE1YGL248W YLR108CQ12259 485 aa5.13□□□□□ -1.59
PDE1YGL248W LSO2Q3E772 92 aaKnown RBP5.13□□□□□ -1.59
PDE1YGL248W YMR085WP0CF18 432 aa5.12□□□□□ -1.59
PDE1YGL248W STE18P18852 110 aa5.12□□□□□ -1.59
PDE1YGL248W URK1P27515 501 aa5.12□□□□□ -1.59
PDE1YGL248W ADE1P27616 306 aa5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms