RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W SCD6P45978 349 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
LCP5YER127W SLG1P54867 378 aa6.36□□□□□ -1.39
LCP5YER127W YMR087WQ04299 284 aa6.36□□□□□ -1.39
LCP5YER127W ALE1Q08548 619 aa6.36□□□□□ -1.39
LCP5YER127W YCR051WP25631 222 aa6.35□□□□□ -1.39
LCP5YER127W STB6P36085 766 aa6.35□□□□□ -1.39
LCP5YER127W YND1P40009 630 aa6.35□□□□□ -1.39
LCP5YER127W GPI1P53306 609 aa6.35□□□□□ -1.39
LCP5YER127W YNL050CP53952 270 aa6.35□□□□□ -1.39
LCP5YER127W RHO2P06781 192 aa6.34□□□□□ -1.39
LCP5YER127W SPS4P09937 338 aa6.34□□□□□ -1.39
LCP5YER127W CLC1P17891 233 aa6.34□□□□□ -1.39
LCP5YER127W ADK2P26364 225 aa6.34□□□□□ -1.39
LCP5YER127W YTA12P40341 825 aa6.34□□□□□ -1.39
LCP5YER127W NUP53Q03790 475 aa6.34□□□□□ -1.39
LCP5YER127W ARX1Q03862 593 aaKnown RBP6.34□□□□□ -1.39
LCP5YER127W SIL1Q08199 421 aa6.34□□□□□ -1.39
LCP5YER127W ISA2Q12425 185 aa6.34□□□□□ -1.39
LCP5YER127W FUN19P28003 413 aaPredicted RBP6.33□□□□□ -1.4
LCP5YER127W ATP11P32453 318 aa6.33□□□□□ -1.4
LCP5YER127W FRE1P32791 686 aa6.33□□□□□ -1.4
LCP5YER127W GCS1P35197 352 aa6.33□□□□□ -1.4
LCP5YER127W RIM2P38127 377 aa6.33□□□□□ -1.4
LCP5YER127W VPS52P39904 641 aa6.33□□□□□ -1.4
LCP5YER127W CFT2Q12102 859 aaPredicted RBP6.33□□□□□ -1.4
LCP5YER127W GLK1P17709 500 aaKnown RBP6.32□□□□□ -1.4
LCP5YER127W YCR007CP25354 239 aa6.32□□□□□ -1.4
LCP5YER127W YIM1P28625 365 aa6.32□□□□□ -1.4
LCP5YER127W VMA8P32610 256 aaKnown RBP6.32□□□□□ -1.4
LCP5YER127W THI2P38141 450 aa6.32□□□□□ -1.4
LCP5YER127W RMD9P53140 646 aaKnown RBP6.32□□□□□ -1.4
LCP5YER127W BNI5P53890 448 aaKnown RBP6.32□□□□□ -1.4
LCP5YER127W YDR131CQ03899 556 aa6.32□□□□□ -1.4
LCP5YER127W ROY1Q04847 553 aa6.32□□□□□ -1.4
LCP5YER127W SYO1Q07395 620 aa6.32□□□□□ -1.4
LCP5YER127W SMC6Q12749 1114 aa6.32□□□□□ -1.4
LCP5YER127W AFI1Q99222 893 aa6.32□□□□□ -1.4
LCP5YER127W SSK22P25390 1331 aaPredicted RBP6.31□□□□□ -1.4
LCP5YER127W CAR1P00812 333 aaKnown RBP6.31□□□□□ -1.4
LCP5YER127W ATP10P18496 279 aa6.31□□□□□ -1.4
LCP5YER127W PPZ1P26570 692 aa6.31□□□□□ -1.4
LCP5YER127W RML2P32611 393 aa6.31□□□□□ -1.4
LCP5YER127W CBP4P37267 147 aa6.31□□□□□ -1.4
LCP5YER127W YMR147WP40218 223 aaKnown RBP6.31□□□□□ -1.4
LCP5YER127W SYG1P40528 902 aa6.31□□□□□ -1.4
LCP5YER127W DIM1P41819 318 aaKnown RBP6.31□□□□□ -1.4
LCP5YER127W IKS1P47042 667 aa6.31□□□□□ -1.4
LCP5YER127W RLI1Q03195 608 aaKnown RBP6.31□□□□□ -1.4
LCP5YER127W LSP1Q12230 341 aaKnown RBP6.31□□□□□ -1.4
LCP5YER127W SRV2P17555 526 aaKnown RBP6.3□□□□□ -1.4
LCP5YER127W SIP2P34164 415 aaKnown RBP6.3□□□□□ -1.4
LCP5YER127W PXA2P34230 853 aa6.3□□□□□ -1.4
LCP5YER127W VMA13P41807 478 aaKnown RBP6.3□□□□□ -1.4
LCP5YER127W FMS1P50264 508 aa6.3□□□□□ -1.4
LCP5YER127W ERB1Q04660 807 aaKnown RBP6.3□□□□□ -1.4
LCP5YER127W MRPL51Q06090 140 aaPredicted RBP6.3□□□□□ -1.4
LCP5YER127W YLR278CQ05854 1341 aa6.29□□□□□ -1.4
LCP5YER127W EXO70P19658 623 aa6.29□□□□□ -1.4
LCP5YER127W NTC20P38302 140 aaPredicted RBP6.29□□□□□ -1.4
LCP5YER127W SNM1P40993 198 aa6.29□□□□□ -1.4
LCP5YER127W URB2P47108 1174 aa6.29□□□□□ -1.4
LCP5YER127W IRC15Q02733 499 aa6.29□□□□□ -1.4
LCP5YER127W UBX2Q04228 584 aa6.29□□□□□ -1.4
LCP5YER127W BNA5Q05979 453 aa6.29□□□□□ -1.4
LCP5YER127W GRS2Q06817 618 aa6.29□□□□□ -1.4
LCP5YER127W YDL009CQ12210 107 aa6.29□□□□□ -1.4
LCP5YER127W RKM5Q12367 367 aa6.29□□□□□ -1.4
LCP5YER127W LYS2P07702 1392 aa6.29□□□□□ -1.4
LCP5YER127W CDC23P16522 626 aa6.28□□□□□ -1.4
LCP5YER127W TFB1P32776 642 aa6.28□□□□□ -1.4
LCP5YER127W YME2P32843 850 aa6.28□□□□□ -1.4
LCP5YER127W SRP72P38688 640 aaKnown RBP6.28□□□□□ -1.4
LCP5YER127W RTR1P40084 226 aaPredicted RBP6.28□□□□□ -1.4
LCP5YER127W YGL138CP53122 345 aa6.28□□□□□ -1.4
LCP5YER127W KAP120Q02932 1032 aa6.28□□□□□ -1.4
LCP5YER127W RRP45Q05636 305 aaKnown RBP6.28□□□□□ -1.4
LCP5YER127W LEU4P06208 619 aaKnown RBP6.27□□□□□ -1.41
LCP5YER127W SEC1P30619 724 aaKnown RBP6.27□□□□□ -1.41
LCP5YER127W PTR2P32901 601 aa6.27□□□□□ -1.41
LCP5YER127W VHC1P38329 1120 aa6.27□□□□□ -1.41
LCP5YER127W YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
LCP5YER127W ISN1Q99312 450 aa6.27□□□□□ -1.41
LCP5YER127W SUP35P05453 685 aaKnown RBP6.26□□□□□ -1.41
LCP5YER127W GPH1P06738 902 aaKnown RBP6.26□□□□□ -1.41
LCP5YER127W HOM3P10869 527 aa6.26□□□□□ -1.41
LCP5YER127W AMD1P15274 810 aaKnown RBP6.26□□□□□ -1.41
LCP5YER127W ERV1P27882 189 aa6.26□□□□□ -1.41
LCP5YER127W REC114P32841 428 aa6.26□□□□□ -1.41
LCP5YER127W APE3P37302 537 aaKnown RBP6.26□□□□□ -1.41
LCP5YER127W ARA1P38115 344 aa6.26□□□□□ -1.41
LCP5YER127W ZIM17P42844 174 aa6.26□□□□□ -1.41
LCP5YER127W ART5P53244 586 aaKnown RBP6.26□□□□□ -1.41
LCP5YER127W KTR5P53966 522 aaPredicted RBP6.26□□□□□ -1.41
LCP5YER127W POM152P39685 1337 aa6.25□□□□□ -1.41
LCP5YER127W CLB1P24868 471 aa6.25□□□□□ -1.41
LCP5YER127W BUB3P26449 341 aa6.25□□□□□ -1.41
LCP5YER127W URA7P28274 579 aaKnown RBP6.25□□□□□ -1.41
LCP5YER127W YIL089WP40500 205 aa6.25□□□□□ -1.41
LCP5YER127W COS5P47187 383 aa6.25□□□□□ -1.41
LCP5YER127W RSC1P53236 928 aa6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms