RNA–Protein interactions for RNA: YDR449C

UTP6, Transcript of Nucleolar protein, yeast

Gene UTP6, Length 1,323 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP6	YDR449C	NCA3	P46955	337 aa		4.73	□□□□□ -1.65
UTP6	YDR449C	SSN8	P47821	323 aa		4.73	□□□□□ -1.65
UTP6	YDR449C	HSP31	Q04432	237 aa		4.73	□□□□□ -1.65
UTP6	YDR449C	MHR1	Q06630	226 aa		4.73	□□□□□ -1.65
UTP6	YDR449C	GRX6	Q12438	231 aa		4.73	□□□□□ -1.65
UTP6	YDR449C	RAD61	Q99359	647 aa		4.73	□□□□□ -1.65
UTP6	YDR449C	SPS4	P09937	338 aa		4.72	□□□□□ -1.65
UTP6	YDR449C	CDC60	P26637	1090 aa	Known RBP	4.72	□□□□□ -1.65
UTP6	YDR449C	PRM5	P40476	318 aa		4.72	□□□□□ -1.65
UTP6	YDR449C	LAM5	P43560	674 aa		4.72	□□□□□ -1.65
UTP6	YDR449C	YPR022C	Q12139	1133 aa		4.72	□□□□□ -1.65
UTP6	YDR449C	MET17	P06106	444 aa		4.72	□□□□□ -1.65
UTP6	YDR449C	MRP7	P12687	371 aa		4.72	□□□□□ -1.65
UTP6	YDR449C	HXT1	P32465	570 aa		4.72	□□□□□ -1.65
UTP6	YDR449C	ECM25	P32525	599 aa		4.72	□□□□□ -1.65
UTP6	YDR449C	HXT11	P54862	567 aa		4.72	□□□□□ -1.65
UTP6	YDR449C	GIR2	Q03768	265 aa	Predicted RBP	4.72	□□□□□ -1.65
UTP6	YDR449C	HRI1	Q05905	244 aa	Known RBP	4.72	□□□□□ -1.65
UTP6	YDR449C	BSC6	Q08280	497 aa		4.72	□□□□□ -1.65
UTP6	YDR449C	TIM18	Q08749	192 aa		4.72	□□□□□ -1.65
UTP6	YDR449C	PKH2	Q12236	1081 aa	Known RBP	4.72	□□□□□ -1.65
UTP6	YDR449C	PPH22	P23595	377 aa		4.71	□□□□□ -1.66
UTP6	YDR449C	ITR1	P30605	584 aa		4.71	□□□□□ -1.66
UTP6	YDR449C	SMF1	P38925	575 aa		4.71	□□□□□ -1.66
UTP6	YDR449C	ECM27	P47144	725 aa		4.71	□□□□□ -1.66
UTP6	YDR449C	TIS11	P47977	285 aa		4.71	□□□□□ -1.66
UTP6	YDR449C	YLR278C	Q05854	1341 aa		4.7	□□□□□ -1.66
UTP6	YDR449C	PET123	P17558	318 aa		4.7	□□□□□ -1.66
UTP6	YDR449C	APE2	P32454	952 aa	Known RBP	4.7	□□□□□ -1.66
UTP6	YDR449C	MTC6	P38849	526 aa		4.7	□□□□□ -1.66
UTP6	YDR449C	UTP9	P38882	575 aa	Known RBP	4.7	□□□□□ -1.66
UTP6	YDR449C	VTC2	P43585	828 aa		4.7	□□□□□ -1.66
UTP6	YDR449C	IRC6	P43615	237 aa		4.7	□□□□□ -1.66
UTP6	YDR449C	YIF1	P53845	314 aa	Known RBP	4.7	□□□□□ -1.66
UTP6	YDR449C	YLR152C	P54072	576 aa		4.7	□□□□□ -1.66
UTP6	YDR449C	RBD2	Q12270	262 aa		4.7	□□□□□ -1.66
UTP6	YDR449C	CKA1	P15790	372 aa		4.69	□□□□□ -1.66
UTP6	YDR449C	HXT3	P32466	567 aa	Known RBP	4.69	□□□□□ -1.66
UTP6	YDR449C	SPR1	P32603	445 aa		4.69	□□□□□ -1.66
UTP6	YDR449C	YGL039W	P53183	348 aa	Known RBP	4.69	□□□□□ -1.66
UTP6	YDR449C	GPH1	P06738	902 aa	Known RBP	4.68	□□□□□ -1.66
UTP6	YDR449C	RPI1	P23250	407 aa	Known RBP	4.68	□□□□□ -1.66
UTP6	YDR449C	RVS161	P25343	265 aa	Known RBP	4.68	□□□□□ -1.66
UTP6	YDR449C	PAN6	P40459	309 aa		4.68	□□□□□ -1.66
UTP6	YDR449C	FRE4	P53746	719 aa		4.68	□□□□□ -1.66
UTP6	YDR449C	HER2	Q03557	464 aa		4.68	□□□□□ -1.66
UTP6	YDR449C	PPM1	Q04081	328 aa		4.68	□□□□□ -1.66
UTP6	YDR449C	BUD21	Q08492	214 aa	Predicted RBP	4.68	□□□□□ -1.66
UTP6	YDR449C	RIP1	P08067	215 aa		4.67	□□□□□ -1.66
UTP6	YDR449C	RPL3	P14126	387 aa	Known RBP	4.67	□□□□□ -1.66
UTP6	YDR449C	ROX1	P25042	368 aa		4.67	□□□□□ -1.66
UTP6	YDR449C	DAL2	P25335	343 aa		4.67	□□□□□ -1.66
UTP6	YDR449C	VHC1	P38329	1120 aa		4.67	□□□□□ -1.66
UTP6	YDR449C	OTU2	P38747	307 aa	Known RBP	4.67	□□□□□ -1.66
UTP6	YDR449C	SAS2	P40963	338 aa		4.67	□□□□□ -1.66
UTP6	YDR449C	HIS4	P00815	799 aa	Known RBP	4.66	□□□□□ -1.66
UTP6	YDR449C	RPS8A	P0CX39	200 aa	Known RBP	4.66	□□□□□ -1.66
UTP6	YDR449C	RPS8B	P0CX40	200 aa	Known RBP	4.66	□□□□□ -1.66
UTP6	YDR449C	SLY1	P22213	666 aa		4.66	□□□□□ -1.66
UTP6	YDR449C	YBR137W	P38276	179 aa		4.66	□□□□□ -1.66
UTP6	YDR449C	MSG5	P38590	489 aa		4.66	□□□□□ -1.66
UTP6	YDR449C	MTM1	P53320	366 aa		4.66	□□□□□ -1.66
UTP6	YDR449C	YNR048W	P53740	393 aa		4.66	□□□□□ -1.66
UTP6	YDR449C	YMR181C	Q03231	154 aa		4.66	□□□□□ -1.66
UTP6	YDR449C	SEC63	P14906	663 aa		4.65	□□□□□ -1.67
UTP6	YDR449C	MNS1	P32906	549 aa		4.65	□□□□□ -1.67
UTP6	YDR449C	LYS1	P38998	373 aa	RIP-Chip data	4.65	□□□□□ -1.67	not detected
UTP6	YDR449C	ESL1	P40456	1118 aa		4.65	□□□□□ -1.67
UTP6	YDR449C	MRPL19	P53875	158 aa		4.65	□□□□□ -1.67
UTP6	YDR449C	SYF1	Q04048	859 aa	Predicted RBP	4.65	□□□□□ -1.67
UTP6	YDR449C	VTA1	Q06263	330 aa		4.65	□□□□□ -1.67
UTP6	YDR449C	SIL1	Q08199	421 aa		4.65	□□□□□ -1.67
UTP6	YDR449C	MDG1	P53885	366 aa		4.64	□□□□□ -1.67
UTP6	YDR449C	SNX3	Q08826	162 aa	Known RBP	4.64	□□□□□ -1.67
UTP6	YDR449C	TEF1	P02994	458 aa	Known RBP	4.63	□□□□□ -1.67
UTP6	YDR449C	TOP1	P04786	769 aa		4.63	□□□□□ -1.67
UTP6	YDR449C	YHR054C	P38780	354 aa		4.63	□□□□□ -1.67
UTP6	YDR449C	NDE1	P40215	560 aa		4.63	□□□□□ -1.67
UTP6	YDR449C	CWC25	P53854	179 aa	Known RBP	4.63	□□□□□ -1.67
UTP6	YDR449C	RPA49	Q01080	415 aa	Predicted RBP	4.63	□□□□□ -1.67
UTP6	YDR449C	ORT1	Q12375	292 aa		4.63	□□□□□ -1.67
UTP6	YDR449C	TRP1	P00912	224 aa		4.62	□□□□□ -1.67
UTP6	YDR449C	ARG4	P04076	463 aa	Predicted RBP	4.62	□□□□□ -1.67
UTP6	YDR449C	NFT1	P0CE68	1218 aa		4.62	□□□□□ -1.67
UTP6	YDR449C	MNP1	P53163	194 aa	Predicted RBP	4.62	□□□□□ -1.67
UTP6	YDR449C	PEX25	Q02969	394 aa		4.62	□□□□□ -1.67
UTP6	YDR449C	YMR027W	Q04371	470 aa		4.62	□□□□□ -1.67
UTP6	YDR449C	WTM1	Q12363	437 aa	Known RBP	4.62	□□□□□ -1.67
UTP6	YDR449C	SOD1	P00445	154 aa	Known RBP	4.61	□□□□□ -1.67
UTP6	YDR449C	RFC3	P38629	340 aa		4.61	□□□□□ -1.67
UTP6	YDR449C	DLD2	P46681	530 aa	Known RBP	4.61	□□□□□ -1.67
UTP6	YDR449C	YJR011C	P47086	261 aa	Predicted RBP	4.61	□□□□□ -1.67
UTP6	YDR449C	SHY1	P53266	389 aa		4.61	□□□□□ -1.67
UTP6	YDR449C	FDH1	Q08911	376 aa		4.61	□□□□□ -1.67
UTP6	YDR449C	YOL159C-A	Q3E769	90 aa		4.61	□□□□□ -1.67
UTP6	YDR449C	HCS1	P34243	683 aa		4.6	□□□□□ -1.67
UTP6	YDR449C	HMS2	P47175	358 aa		4.6	□□□□□ -1.67
UTP6	YDR449C	SGT1	Q08446	395 aa		4.6	□□□□□ -1.67
UTP6	YDR449C	RTN2	Q12443	393 aa		4.6	□□□□□ -1.67
UTP6	YDR449C	LSB5	P25369	354 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms