RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W TDP1P38319 544 aa1.49□□□□□ -2.17
SXM1YDR395W ERC1P38767 581 aa1.49□□□□□ -2.17
SXM1YDR395W GPI16P38875 610 aa1.49□□□□□ -2.17
SXM1YDR395W TVP23P38962 199 aa1.49□□□□□ -2.17
SXM1YDR395W NUP60P39705 539 aa1.49□□□□□ -2.17
SXM1YDR395W FMC1P40491 155 aa1.49□□□□□ -2.17
SXM1YDR395W IST3P40565 148 aaPredicted RBP1.49□□□□□ -2.17
SXM1YDR395W GSM1P42950 618 aa1.49□□□□□ -2.17
SXM1YDR395W TOS3P43637 560 aa1.49□□□□□ -2.17
SXM1YDR395W NIT3P49954 291 aa1.49□□□□□ -2.17
SXM1YDR395W LSG1P53145 640 aaKnown RBP1.49□□□□□ -2.17
SXM1YDR395W RET3P53600 189 aa1.49□□□□□ -2.17
SXM1YDR395W CUS2P53830 285 aaPredicted RBP1.49□□□□□ -2.17
SXM1YDR395W RHO5P53879 331 aaKnown RBP1.49□□□□□ -2.17
SXM1YDR395W YNL134CP53912 376 aaKnown RBP1.49□□□□□ -2.17
SXM1YDR395W BOP3P53958 396 aa1.49□□□□□ -2.17
SXM1YDR395W DIA1P54005 336 aa1.49□□□□□ -2.17
SXM1YDR395W ACS1Q01574 713 aa1.49□□□□□ -2.17
SXM1YDR395W RCR2Q03446 210 aaKnown RBP1.49□□□□□ -2.17
SXM1YDR395W ATC1Q04005 294 aa1.49□□□□□ -2.17
SXM1YDR395W CSI1Q04368 295 aa1.49□□□□□ -2.17
SXM1YDR395W ARP10Q04549 284 aa1.49□□□□□ -2.17
SXM1YDR395W GTO3Q04806 366 aa1.49□□□□□ -2.17
SXM1YDR395W SEC10Q06245 871 aa1.49□□□□□ -2.17
SXM1YDR395W VTA1Q06263 330 aa1.49□□□□□ -2.17
SXM1YDR395W ACM1Q08981 209 aa1.49□□□□□ -2.17
SXM1YDR395W RAD61Q99359 647 aa1.49□□□□□ -2.17
SXM1YDR395W COX2P00410 251 aa1.48□□□□□ -2.17
SXM1YDR395W RNR2P09938 399 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W DSF1P0CX08 502 aa1.48□□□□□ -2.17
SXM1YDR395W YNR073CP0CX09 502 aa1.48□□□□□ -2.17
SXM1YDR395W FRS1P15624 595 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W POL30P15873 258 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W RPO26P20435 155 aa1.48□□□□□ -2.17
SXM1YDR395W VPS33P20795 691 aa1.48□□□□□ -2.17
SXM1YDR395W PRE8P23639 250 aa1.48□□□□□ -2.17
SXM1YDR395W BEM1P29366 551 aa1.48□□□□□ -2.17
SXM1YDR395W DGR2P32330 852 aa1.48□□□□□ -2.17
SXM1YDR395W YME2P32843 850 aa1.48□□□□□ -2.17
SXM1YDR395W GDH2P33327 1092 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W MRPL37P36532 105 aa1.48□□□□□ -2.17
SXM1YDR395W YBL029WP38201 376 aa1.48□□□□□ -2.17
SXM1YDR395W FES1P38260 290 aa1.48□□□□□ -2.17
SXM1YDR395W ELO3P40319 345 aa1.48□□□□□ -2.17
SXM1YDR395W SGN1P40561 250 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
SXM1YDR395W YIR042CP40586 236 aa1.48□□□□□ -2.17
SXM1YDR395W FMP33P46998 180 aa1.48□□□□□ -2.17
SXM1YDR395W RPA34P47006 233 aaPredicted RBP1.48□□□□□ -2.17
SXM1YDR395W AIM23P47015 356 aa1.48□□□□□ -2.17
SXM1YDR395W ALY2P47029 1046 aa1.48□□□□□ -2.17
SXM1YDR395W MPS3P47069 682 aa1.48□□□□□ -2.17
SXM1YDR395W VMA10P48836 114 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W RIB4P50861 169 aaPredicted RBP1.48□□□□□ -2.17
SXM1YDR395W TAF6P53040 516 aa1.48□□□□□ -2.17
SXM1YDR395W YGL185CP53100 379 aa1.48□□□□□ -2.17
SXM1YDR395W MND1P53102 219 aa1.48□□□□□ -2.17
SXM1YDR395W MPS2P53159 387 aa1.48□□□□□ -2.17
SXM1YDR395W TWF1P53250 332 aa1.48□□□□□ -2.17
SXM1YDR395W SLI1P53304 468 aa1.48□□□□□ -2.17
SXM1YDR395W ORC3P54790 616 aa1.48□□□□□ -2.17
SXM1YDR395W MUK1Q02866 612 aa1.48□□□□□ -2.17
SXM1YDR395W ENT5Q03769 411 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W ACL4Q03771 387 aa1.48□□□□□ -2.17
SXM1YDR395W FIN1Q03898 291 aa1.48□□□□□ -2.17
SXM1YDR395W PPM1Q04081 328 aa1.48□□□□□ -2.17
SXM1YDR395W VPS38Q05919 439 aa1.48□□□□□ -2.17
SXM1YDR395W BNA5Q05979 453 aa1.48□□□□□ -2.17
SXM1YDR395W RRG8Q06109 277 aa1.48□□□□□ -2.17
SXM1YDR395W CMS1Q07897 291 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W DCI1Q08558 271 aa1.48□□□□□ -2.17
SXM1YDR395W GEP3Q08622 556 aa1.48□□□□□ -2.17
SXM1YDR395W BUD7Q08754 746 aa1.48□□□□□ -2.17
SXM1YDR395W RKM1Q08961 583 aaPredicted RBP1.48□□□□□ -2.17
SXM1YDR395W LEA1Q08963 238 aaPredicted RBP1.48□□□□□ -2.17
SXM1YDR395W INP53Q12271 1107 aa1.48□□□□□ -2.17
SXM1YDR395W COX17Q12287 69 aa1.48□□□□□ -2.17
SXM1YDR395W PNO1Q99216 274 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W DFG16Q99234 619 aa1.48□□□□□ -2.17
SXM1YDR395W Q0142Q9ZZW4 58 aa1.48□□□□□ -2.17
SXM1YDR395W RPL15AP05748 204 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W RAD7P06779 565 aa1.48□□□□□ -2.17
SXM1YDR395W CDC42P19073 191 aa1.48□□□□□ -2.17
SXM1YDR395W SAG1P20840 650 aa1.48□□□□□ -2.17
SXM1YDR395W MRPL8P22353 238 aa1.48□□□□□ -2.17
SXM1YDR395W RBK1P25332 333 aa1.48□□□□□ -2.17
SXM1YDR395W BOS1P25385 244 aa1.48□□□□□ -2.17
SXM1YDR395W PRO3P32263 286 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W MVD1P32377 396 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W COQ2P32378 372 aa1.48□□□□□ -2.17
SXM1YDR395W SPO23P33757 523 aa1.48□□□□□ -2.17
SXM1YDR395W RPC25P35718 212 aa1.48□□□□□ -2.17
SXM1YDR395W YKL077WP36081 392 aa1.48□□□□□ -2.17
SXM1YDR395W AUR1P36107 401 aaPredicted RBP1.48□□□□□ -2.17
SXM1YDR395W ALY1P36117 915 aa1.48□□□□□ -2.17
SXM1YDR395W FLR1P38124 548 aa1.48□□□□□ -2.17
SXM1YDR395W IML3P38265 245 aa1.48□□□□□ -2.17
SXM1YDR395W ATG14P38270 344 aa1.48□□□□□ -2.17
SXM1YDR395W YNG2P38806 282 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W YHR122WP38829 231 aa1.48□□□□□ -2.17
SXM1YDR395W FHL1P39521 936 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms