RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	YIF1	P53845	314 aa	Known RBP	2.7	□□□□□ -1.98
TFB1	YDR311W	YDR387C	Q04162	555 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	MRPL1	Q04599	285 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	SWF1	Q04629	336 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	MSC3	Q05812	728 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	SNT309	Q06091	175 aa	Predicted RBP	2.7	□□□□□ -1.98
TFB1	YDR311W	DIC1	Q06143	298 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	BRR1	Q99177	341 aa	Predicted RBP	2.7	□□□□□ -1.98
TFB1	YDR311W	VPS63	O13549	108 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	YMR085W	P0CF18	432 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	GAT2	P40209	560 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	MKT1	P40850	830 aa	Known RBP	2.7	□□□□□ -1.98
TFB1	YDR311W	GAT1	P43574	510 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	AIP1	P46680	615 aa	Known RBP	2.7	□□□□□ -1.98
TFB1	YDR311W	ASN2	P49090	572 aa	Known RBP	2.7	□□□□□ -1.98
TFB1	YDR311W	UBP8	P50102	471 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	RHO4	Q00246	291 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	YDR541C	Q03049	344 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	ARP10	Q04549	284 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	SMA2	Q04658	369 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	CUR1	Q06469	252 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	IPK1	Q06667	281 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	IRC10	Q08118	586 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	GSH2	Q08220	491 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	FRE7	Q12333	620 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	PFK27	Q12471	397 aa	Predicted RBP	2.7	□□□□□ -1.98
TFB1	YDR311W	GAL7	P08431	366 aa		2.69	□□□□□ -1.98
TFB1	YDR311W	UTR4	P32626	227 aa		2.69	□□□□□ -1.98
TFB1	YDR311W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
TFB1	YDR311W	APD1	P38281	316 aa		2.69	□□□□□ -1.98
TFB1	YDR311W	RTT107	P38850	1070 aa		2.69	□□□□□ -1.98
TFB1	YDR311W	LIN1	P38852	340 aa	Predicted RBP	2.69	□□□□□ -1.98
TFB1	YDR311W	TRS85	P46944	698 aa		2.69	□□□□□ -1.98
TFB1	YDR311W	RPN14	P53196	417 aa		2.69	□□□□□ -1.98
TFB1	YDR311W	TIM11	P81449	96 aa	Predicted RBP	2.69	□□□□□ -1.98
TFB1	YDR311W	APM1	Q00776	475 aa	Predicted RBP	2.69	□□□□□ -1.98
TFB1	YDR311W	STD1	Q02794	444 aa		2.69	□□□□□ -1.98
TFB1	YDR311W	YMR111C	Q04461	462 aa	Predicted RBP	2.69	□□□□□ -1.98
TFB1	YDR311W	SSK1	Q07084	712 aa		2.69	□□□□□ -1.98
TFB1	YDR311W	PKH2	Q12236	1081 aa	Known RBP	2.69	□□□□□ -1.98
TFB1	YDR311W	RRI1	Q12468	440 aa		2.69	□□□□□ -1.98
TFB1	YDR311W	CBP2	P03874	630 aa	Predicted RBP	2.68	□□□□□ -1.98
TFB1	YDR311W	CHS1	P08004	1131 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	ERG11	P10614	530 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	SNC1	P31109	117 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	RAD24	P32641	659 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	HOT13	P36078	116 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	FLO10	P36170	1169 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	OLA1	P38219	394 aa	Known RBP	2.68	□□□□□ -1.98
TFB1	YDR311W	SPC97	P38863	823 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	PCF11	P39081	626 aa	Predicted RBP	2.68	□□□□□ -1.98
TFB1	YDR311W	SSO2	P39926	295 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	VRG4	P40107	337 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	YFR016C	P43597	1233 aa	Known RBP	2.68	□□□□□ -1.98
TFB1	YDR311W	YFR018C	P43599	363 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	ARP5	P53946	755 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	STE23	Q06010	1027 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	YLR112W	Q12130	139 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	SPO11	P23179	398 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	RPI1	P23250	407 aa	Known RBP	2.68	□□□□□ -1.98
TFB1	YDR311W	COQ3	P27680	312 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	PSO2	P30620	661 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	HSP104	P31539	908 aa	Known RBP	2.68	□□□□□ -1.98
TFB1	YDR311W	SMY1	P32364	656 aa	Known RBP	2.68	□□□□□ -1.98
TFB1	YDR311W	KAP104	P38217	918 aa	Known RBP	2.68	□□□□□ -1.98
TFB1	YDR311W	INM1	P38710	295 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	YHR131C	P38835	850 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	MNN9	P39107	395 aa	Known RBP	2.68	□□□□□ -1.98
TFB1	YDR311W	FAU1	P40099	211 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	AIM20	P40451	204 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	YPS6	P40583	537 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	BPL1	P48445	690 aa	Predicted RBP	2.68	□□□□□ -1.98
TFB1	YDR311W	ATP23	P53722	227 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	GIP3	Q03016	1276 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	SLD5	Q03406	294 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	CAC2	Q04199	468 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	ECM7	Q06200	448 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	MCP2	Q06567	569 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	YLR413W	Q06689	675 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	MRPL23	Q12487	163 aa	Predicted RBP	2.68	□□□□□ -1.98
TFB1	YDR311W	SRN2	Q99176	213 aa		2.68	□□□□□ -1.98
TFB1	YDR311W	CDC21	P06785	304 aa		2.67	□□□□□ -1.98
TFB1	YDR311W	IMA3	P0CW40	589 aa		2.67	□□□□□ -1.98
TFB1	YDR311W	IMA4	P0CW41	589 aa		2.67	□□□□□ -1.98
TFB1	YDR311W	PUT4	P15380	627 aa		2.67	□□□□□ -1.98
TFB1	YDR311W	ADY2	P25613	283 aa		2.67	□□□□□ -1.98
TFB1	YDR311W	BUB3	P26449	341 aa		2.67	□□□□□ -1.98
TFB1	YDR311W	APE2	P32454	952 aa	Known RBP	2.67	□□□□□ -1.98
TFB1	YDR311W	ECM25	P32525	599 aa		2.67	□□□□□ -1.98
TFB1	YDR311W	CYS4	P32582	507 aa	Known RBP	2.67	□□□□□ -1.98
TFB1	YDR311W	RGT1	P32862	1170 aa		2.67	□□□□□ -1.98
TFB1	YDR311W	YER079W	P40052	210 aa	Known RBP	2.67	□□□□□ -1.98
TFB1	YDR311W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	RIP-Chip
TFB1	YDR311W	PMT5	P52867	743 aa		2.67	□□□□□ -1.98
TFB1	YDR311W	PNC1	P53184	216 aa	Known RBP	2.67	□□□□□ -1.98
TFB1	YDR311W	PCP1	P53259	346 aa		2.67	□□□□□ -1.98
TFB1	YDR311W	CTL1	Q03220	320 aa	Known RBP	2.67	□□□□□ -1.98
TFB1	YDR311W	RRB1	Q04225	511 aa	Known RBP	2.67	□□□□□ -1.98
TFB1	YDR311W	NSE1	Q07913	336 aa		2.67	□□□□□ -1.98
TFB1	YDR311W	IMA2	Q08295	589 aa		2.67	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 135.1 ms