RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A MET17P06106 444 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A RPL3P14126 387 aaKnown RBP3.19□□□□□ -1.9
YDR261W-AYDR261W-A CKA1P15790 372 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A RPI1P23250 407 aaKnown RBP3.19□□□□□ -1.9
YDR261W-AYDR261W-A ECM25P32525 599 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A NIP100P33420 868 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A RRT2P38332 387 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A SMF1P38925 575 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A MST28P39552 234 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A ECM27P47144 725 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A YIF1P53845 314 aaKnown RBP3.19□□□□□ -1.9
YDR261W-AYDR261W-A MDG1P53885 366 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A RRG7Q08774 242 aaPredicted RBP3.19□□□□□ -1.9
YDR261W-AYDR261W-A YLR278CQ05854 1341 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A HIS4P00815 799 aaKnown RBP3.19□□□□□ -1.9
YDR261W-AYDR261W-A GPH1P06738 902 aaKnown RBP3.19□□□□□ -1.9
YDR261W-AYDR261W-A CLN3P13365 580 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A ISY1P21374 235 aaPredicted RBP3.19□□□□□ -1.9
YDR261W-AYDR261W-A TIP1P27654 210 aaPredicted RBP3.19□□□□□ -1.9
YDR261W-AYDR261W-A HXT1P32465 570 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A VHC1P38329 1120 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A PRM5P40476 318 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A REE1P40893 198 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A MNP1P53163 194 aaPredicted RBP3.19□□□□□ -1.9
YDR261W-AYDR261W-A MRPL19P53875 158 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A VTA1Q06263 330 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A TSR2Q06672 205 aaKnown RBP3.19□□□□□ -1.9
YDR261W-AYDR261W-A TIM18Q08749 192 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A YPR022CQ12139 1133 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A HRT3Q12347 344 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A RAD61Q99359 647 aa3.19□□□□□ -1.9
YDR261W-AYDR261W-A ADH2P00331 348 aaKnown RBP3.18□□□□□ -1.9
YDR261W-AYDR261W-A TOP1P04786 769 aa3.18□□□□□ -1.9
YDR261W-AYDR261W-A PET123P17558 318 aa3.18□□□□□ -1.9
YDR261W-AYDR261W-A DAL2P25335 343 aa3.18□□□□□ -1.9
YDR261W-AYDR261W-A PRP21P32524 280 aaPredicted RBP3.18□□□□□ -1.9
YDR261W-AYDR261W-A PIM1P36775 1133 aa3.18□□□□□ -1.9
YDR261W-AYDR261W-A MTC6P38849 526 aa3.18□□□□□ -1.9
YDR261W-AYDR261W-A ESL1P40456 1118 aa3.18□□□□□ -1.9
YDR261W-AYDR261W-A IRC6P43615 237 aa3.18□□□□□ -1.9
YDR261W-AYDR261W-A KTR5P53966 522 aaPredicted RBP3.18□□□□□ -1.9
YDR261W-AYDR261W-A HER2Q03557 464 aa3.18□□□□□ -1.9
YDR261W-AYDR261W-A HRI1Q05905 244 aaKnown RBP3.18□□□□□ -1.9
YDR261W-AYDR261W-A MHR1Q06630 226 aa3.18□□□□□ -1.9
YDR261W-AYDR261W-A GRX6Q12438 231 aa3.18□□□□□ -1.9
YDR261W-AYDR261W-A CCT2P39076 527 aaKnown RBP3.17□□□□□ -1.9
YDR261W-AYDR261W-A TIS11P47977 285 aa3.17□□□□□ -1.9
YDR261W-AYDR261W-A SUB1P54000 292 aaKnown RBP3.17□□□□□ -1.9
YDR261W-AYDR261W-A REX4Q08237 289 aa3.17□□□□□ -1.9
YDR261W-AYDR261W-A ARG4P04076 463 aaPredicted RBP3.16□□□□□ -1.9
YDR261W-AYDR261W-A ROX1P25042 368 aa3.16□□□□□ -1.9
YDR261W-AYDR261W-A HXT3P32466 567 aaKnown RBP3.16□□□□□ -1.9
YDR261W-AYDR261W-A HCS1P34243 683 aa3.16□□□□□ -1.9
YDR261W-AYDR261W-A YHR054CP38780 354 aa3.16□□□□□ -1.9
YDR261W-AYDR261W-A LYS1P38998 373 aaRIP-Chip data3.16□□□□□ -1.9not detected
YDR261W-AYDR261W-A NDE1P40215 560 aa3.16□□□□□ -1.9
YDR261W-AYDR261W-A VMA13P41807 478 aaKnown RBP3.16□□□□□ -1.9
YDR261W-AYDR261W-A FMS1P50264 508 aa3.16□□□□□ -1.9
YDR261W-AYDR261W-A YGL039WP53183 348 aaKnown RBP3.16□□□□□ -1.9
YDR261W-AYDR261W-A FRE4P53746 719 aa3.16□□□□□ -1.9
YDR261W-AYDR261W-A PPM1Q04081 328 aa3.16□□□□□ -1.9
YDR261W-AYDR261W-A SIL1Q08199 421 aa3.16□□□□□ -1.9
YDR261W-AYDR261W-A TEF1P02994 458 aaKnown RBP3.15□□□□□ -1.91
YDR261W-AYDR261W-A SLY1P22213 666 aa3.15□□□□□ -1.91
YDR261W-AYDR261W-A RVS161P25343 265 aaKnown RBP3.15□□□□□ -1.91
YDR261W-AYDR261W-A CDC60P26637 1090 aaKnown RBP3.15□□□□□ -1.91
YDR261W-AYDR261W-A MNS1P32906 549 aa3.15□□□□□ -1.91
YDR261W-AYDR261W-A ARA1P38115 344 aa3.15□□□□□ -1.91
YDR261W-AYDR261W-A YLR152CP54072 576 aa3.15□□□□□ -1.91
YDR261W-AYDR261W-A HXT11P54862 567 aa3.15□□□□□ -1.91
YDR261W-AYDR261W-A PEX25Q02969 394 aa3.15□□□□□ -1.91
YDR261W-AYDR261W-A YMR181CQ03231 154 aa3.15□□□□□ -1.91
YDR261W-AYDR261W-A RIP1P08067 215 aa3.14□□□□□ -1.91
YDR261W-AYDR261W-A RED1P14291 827 aa3.14□□□□□ -1.91
YDR261W-AYDR261W-A SRV2P17555 526 aaKnown RBP3.14□□□□□ -1.91
YDR261W-AYDR261W-A CLB3P24870 427 aa3.14□□□□□ -1.91
YDR261W-AYDR261W-A SPR1P32603 445 aa3.14□□□□□ -1.91
YDR261W-AYDR261W-A PAN6P40459 309 aa3.14□□□□□ -1.91
YDR261W-AYDR261W-A SAS2P40963 338 aa3.14□□□□□ -1.91
YDR261W-AYDR261W-A DLD2P46681 530 aaKnown RBP3.14□□□□□ -1.91
YDR261W-AYDR261W-A HMS2P47175 358 aa3.14□□□□□ -1.91
YDR261W-AYDR261W-A YNR048WP53740 393 aa3.14□□□□□ -1.91
YDR261W-AYDR261W-A SGT1Q08446 395 aa3.14□□□□□ -1.91
YDR261W-AYDR261W-A SNX3Q08826 162 aaKnown RBP3.14□□□□□ -1.91
YDR261W-AYDR261W-A RBD2Q12270 262 aa3.14□□□□□ -1.91
YDR261W-AYDR261W-A HSP42Q12329 375 aa3.14□□□□□ -1.91
YDR261W-AYDR261W-A RTN2Q12443 393 aa3.14□□□□□ -1.91
YDR261W-AYDR261W-A CLC1P17891 233 aa3.13□□□□□ -1.91
YDR261W-AYDR261W-A ITR1P30605 584 aa3.13□□□□□ -1.91
YDR261W-AYDR261W-A RPN12P32496 274 aa3.13□□□□□ -1.91
YDR261W-AYDR261W-A MUD1P32605 298 aaKnown RBP3.13□□□□□ -1.91
YDR261W-AYDR261W-A RPS0BP46654 252 aaKnown RBP3.13□□□□□ -1.91
YDR261W-AYDR261W-A CWC25P53854 179 aaKnown RBP3.13□□□□□ -1.91
YDR261W-AYDR261W-A INH1P01097 85 aa3.12□□□□□ -1.91
YDR261W-AYDR261W-A SAS3P34218 831 aa3.12□□□□□ -1.91
YDR261W-AYDR261W-A KKQ8P36004 724 aa3.12□□□□□ -1.91
YDR261W-AYDR261W-A NTC20P38302 140 aaPredicted RBP3.12□□□□□ -1.91
YDR261W-AYDR261W-A YJR011CP47086 261 aaPredicted RBP3.12□□□□□ -1.91
YDR261W-AYDR261W-A RPA49Q01080 415 aaPredicted RBP3.12□□□□□ -1.91
YDR261W-AYDR261W-A BET5Q03630 159 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms