RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W ORM2Q06144 216 aa4□□□□□ -1.77
HPR1YDR138W CFT1Q06632 1357 aaKnown RBP4□□□□□ -1.77
HPR1YDR138W HBT1Q07653 1046 aaKnown RBP4□□□□□ -1.77
HPR1YDR138W SOR2Q07786 357 aa4□□□□□ -1.77
HPR1YDR138W VPS63O13549 108 aa4□□□□□ -1.77
HPR1YDR138W MES1P00958 751 aaKnown RBP4□□□□□ -1.77
HPR1YDR138W SCEIP03882 235 aa4□□□□□ -1.77
HPR1YDR138W PTR2P32901 601 aa4□□□□□ -1.77
HPR1YDR138W RPC34P32910 317 aa4□□□□□ -1.77
HPR1YDR138W VHC1P38329 1120 aa4□□□□□ -1.77
HPR1YDR138W CHS7P38843 316 aa4□□□□□ -1.77
HPR1YDR138W STD1Q02794 444 aa4□□□□□ -1.77
HPR1YDR138W SPO19Q03029 223 aa4□□□□□ -1.77
HPR1YDR138W TMN2Q04562 672 aa4□□□□□ -1.77
HPR1YDR138W RRN11Q04712 507 aa4□□□□□ -1.77
HPR1YDR138W IKI3Q06706 1349 aaKnown RBP3.99□□□□□ -1.77
HPR1YDR138W GAL4P04386 881 aa3.99□□□□□ -1.77
HPR1YDR138W BNA4P38169 460 aa3.99□□□□□ -1.77
HPR1YDR138W YHR131CP38835 850 aa3.99□□□□□ -1.77
HPR1YDR138W YJL070CP40361 888 aa3.99□□□□□ -1.77
HPR1YDR138W YJR154WP47181 346 aa3.99□□□□□ -1.77
HPR1YDR138W EKI1Q03764 534 aa3.99□□□□□ -1.77
HPR1YDR138W SNU56Q03782 492 aaKnown RBP3.99□□□□□ -1.77
HPR1YDR138W YMR111CQ04461 462 aaPredicted RBP3.99□□□□□ -1.77
HPR1YDR138W ILV5P06168 395 aaKnown RBP3.98□□□□□ -1.77
HPR1YDR138W RHO2P06781 192 aa3.98□□□□□ -1.77
HPR1YDR138W NFT1P0CE68 1218 aa3.98□□□□□ -1.77
HPR1YDR138W PMR1P13586 950 aa3.98□□□□□ -1.77
HPR1YDR138W YSC83P32792 385 aa3.98□□□□□ -1.77
HPR1YDR138W SLX1P38324 304 aa3.98□□□□□ -1.77
HPR1YDR138W TIF5P38431 405 aaKnown RBP3.98□□□□□ -1.77
HPR1YDR138W MKT1P40850 830 aaKnown RBP3.98□□□□□ -1.77
HPR1YDR138W NNT1Q05874 261 aa3.98□□□□□ -1.77
HPR1YDR138W PFA4Q12006 378 aa3.98□□□□□ -1.77
HPR1YDR138W ULA1Q12059 462 aa3.98□□□□□ -1.77
HPR1YDR138W NTG1P31378 399 aa3.98□□□□□ -1.77
HPR1YDR138W HSP104P31539 908 aaKnown RBP3.98□□□□□ -1.77
HPR1YDR138W NDI1P32340 513 aa3.98□□□□□ -1.77
HPR1YDR138W MMS4P38257 691 aa3.98□□□□□ -1.77
HPR1YDR138W SPP381P38282 291 aaPredicted RBP3.98□□□□□ -1.77
HPR1YDR138W SMC2P38989 1170 aaKnown RBP3.98□□□□□ -1.77
HPR1YDR138W PHO86P46956 311 aa3.98□□□□□ -1.77
HPR1YDR138W NMD5P46970 1048 aa3.98□□□□□ -1.77
HPR1YDR138W AAT1Q01802 451 aa3.98□□□□□ -1.77
HPR1YDR138W RDL1Q12305 139 aaKnown RBP3.98□□□□□ -1.77
HPR1YDR138W BAR1P12630 587 aa3.97□□□□□ -1.77
HPR1YDR138W SEC62P21825 274 aa3.97□□□□□ -1.77
HPR1YDR138W ITR1P30605 584 aa3.97□□□□□ -1.77
HPR1YDR138W ASF2P32448 525 aaPredicted RBP3.97□□□□□ -1.77
HPR1YDR138W KRE6P32486 720 aa3.97□□□□□ -1.77
HPR1YDR138W ELM1P32801 640 aa3.97□□□□□ -1.77
HPR1YDR138W NUF2P33895 451 aa3.97□□□□□ -1.77
HPR1YDR138W MNL1P38888 796 aa3.97□□□□□ -1.77
HPR1YDR138W LOC1P43586 204 aaPredicted RBP3.97□□□□□ -1.77
HPR1YDR138W TRF5P48561 642 aaKnown RBP3.97□□□□□ -1.77
HPR1YDR138W RMD9P53140 646 aaKnown RBP3.97□□□□□ -1.77
HPR1YDR138W YPL014WQ02606 381 aa3.97□□□□□ -1.77
HPR1YDR138W MCH4Q08268 501 aa3.97□□□□□ -1.77
HPR1YDR138W PUS9Q12069 462 aa3.97□□□□□ -1.77
HPR1YDR138W YLR049CQ12110 428 aa3.97□□□□□ -1.77
HPR1YDR138W MED2Q12124 431 aa3.97□□□□□ -1.77
HPR1YDR138W RIO1Q12196 484 aaKnown RBP3.97□□□□□ -1.77
HPR1YDR138W CBP2P03874 630 aaPredicted RBP3.97□□□□□ -1.77
HPR1YDR138W SEN2P16658 377 aa3.97□□□□□ -1.77
HPR1YDR138W SAT4P25333 603 aaKnown RBP3.97□□□□□ -1.77
HPR1YDR138W QDR3P38227 689 aa3.97□□□□□ -1.77
HPR1YDR138W SPT8P38915 602 aa3.97□□□□□ -1.77
HPR1YDR138W YPS6P40583 537 aa3.97□□□□□ -1.77
HPR1YDR138W GCD14P46959 383 aaPredicted RBP3.97□□□□□ -1.77
HPR1YDR138W YJL043WP47053 257 aa3.97□□□□□ -1.77
HPR1YDR138W UBP8P50102 471 aa3.97□□□□□ -1.77
HPR1YDR138W NUP84P52891 726 aa3.97□□□□□ -1.77
HPR1YDR138W YGR266WP53326 701 aa3.97□□□□□ -1.77
HPR1YDR138W PXR1P53335 271 aaPredicted RBP3.97□□□□□ -1.77
HPR1YDR138W MRPL1Q04599 285 aa3.97□□□□□ -1.77
HPR1YDR138W PDR8Q06149 701 aa3.97□□□□□ -1.77
HPR1YDR138W IPK1Q06667 281 aa3.97□□□□□ -1.77
HPR1YDR138W RRT8Q08219 342 aa3.97□□□□□ -1.77
HPR1YDR138W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
HPR1YDR138W JIP3O13555 125 aa3.96□□□□□ -1.78
HPR1YDR138W TYR1P20049 452 aa3.96□□□□□ -1.78
HPR1YDR138W FUN19P28003 413 aaPredicted RBP3.96□□□□□ -1.78
HPR1YDR138W ECM4P36156 370 aa3.96□□□□□ -1.78
HPR1YDR138W ARN1P38731 627 aa3.96□□□□□ -1.78
HPR1YDR138W SHC1P39000 512 aa3.96□□□□□ -1.78
HPR1YDR138W RPA34P47006 233 aaPredicted RBP3.96□□□□□ -1.78
HPR1YDR138W PMT5P52867 743 aa3.96□□□□□ -1.78
HPR1YDR138W SMM1P53720 384 aaKnown RBP3.96□□□□□ -1.78
HPR1YDR138W YVH1Q02256 364 aaKnown RBP3.96□□□□□ -1.78
HPR1YDR138W NUP100Q02629 959 aa3.96□□□□□ -1.78
HPR1YDR138W LGE1Q02796 332 aaKnown RBP3.96□□□□□ -1.78
HPR1YDR138W KAP95Q06142 861 aaKnown RBP3.96□□□□□ -1.78
HPR1YDR138W YPR078CQ06813 372 aa3.96□□□□□ -1.78
HPR1YDR138W ACF2Q12168 779 aa3.96□□□□□ -1.78
HPR1YDR138W NBL1Q3E7Y6 73 aa3.96□□□□□ -1.78
HPR1YDR138W SSE1P32589 693 aaKnown RBP3.96□□□□□ -1.78
HPR1YDR138W YKL097CP34245 136 aa3.96□□□□□ -1.78
HPR1YDR138W MAK5P38112 773 aaPredicted RBP3.96□□□□□ -1.78
HPR1YDR138W DED81P38707 554 aaKnown RBP3.96□□□□□ -1.78
HPR1YDR138W RTT107P38850 1070 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms