RNA–Protein interactions for RNA: YDL047W

SIT4, Transcript of Type 2A-related serine-threonine phosphatase, yeastyeast

Gene SIT4, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIT4YDL047W Q0010Q9ZZX9 128 aa5.63□□□□□ -1.51
SIT4YDL047W CDC39P25655 2108 aaKnown RBP5.63□□□□□ -1.51
SIT4YDL047W SEC16P48415 2195 aaKnown RBP5.62□□□□□ -1.51
SIT4YDL047W SGV1P23293 657 aaKnown RBP5.62□□□□□ -1.51
SIT4YDL047W FUN30P31380 1131 aa5.62□□□□□ -1.51
SIT4YDL047W PET127P32606 800 aa5.62□□□□□ -1.51
SIT4YDL047W RPS1AP33442 255 aaKnown RBP5.62□□□□□ -1.51
SIT4YDL047W TIF3P34167 436 aaKnown RBP5.62□□□□□ -1.51
SIT4YDL047W SPP381P38282 291 aaPredicted RBP5.62□□□□□ -1.51
SIT4YDL047W YHB1P39676 399 aaKnown RBP5.62□□□□□ -1.51
SIT4YDL047W FMP52P40008 231 aa5.62□□□□□ -1.51
SIT4YDL047W COA1P40452 197 aa5.62□□□□□ -1.51
SIT4YDL047W ZIP2P53061 704 aa5.62□□□□□ -1.51
SIT4YDL047W OAZ1Q02803 292 aa5.62□□□□□ -1.51
SIT4YDL047W PDR8Q06149 701 aa5.62□□□□□ -1.51
SIT4YDL047W NOB1Q08444 459 aaKnown RBP5.62□□□□□ -1.51
SIT4YDL047W YOR376WQ08900 122 aa5.62□□□□□ -1.51
SIT4YDL047W NMD4Q12129 218 aa5.62□□□□□ -1.51
SIT4YDL047W NOP14Q99207 810 aaKnown RBP5.62□□□□□ -1.51
SIT4YDL047W AI1P03875 834 aa5.61□□□□□ -1.51
SIT4YDL047W TY2A-LR1P0C2J4 438 aa5.61□□□□□ -1.51
SIT4YDL047W TY2A-FP0CX61 438 aa5.61□□□□□ -1.51
SIT4YDL047W TY2A-GR2P0CX62 438 aa5.61□□□□□ -1.51
SIT4YDL047W VPS33P20795 691 aa5.61□□□□□ -1.51
SIT4YDL047W RPA135P22138 1203 aaKnown RBP5.61□□□□□ -1.51
SIT4YDL047W NPR1P22211 790 aa5.61□□□□□ -1.51
SIT4YDL047W TY2A-CP25383 438 aa5.61□□□□□ -1.51
SIT4YDL047W SPB1P25582 841 aaPredicted RBP5.61□□□□□ -1.51
SIT4YDL047W COX13P32799 129 aa5.61□□□□□ -1.51
SIT4YDL047W ARC19P33204 171 aaKnown RBP5.61□□□□□ -1.51
SIT4YDL047W ALG3P38179 458 aa5.61□□□□□ -1.51
SIT4YDL047W OM14P38325 134 aa5.61□□□□□ -1.51
SIT4YDL047W YJL206CP39529 758 aa5.61□□□□□ -1.51
SIT4YDL047W YEL020CP39994 560 aa5.61□□□□□ -1.51
SIT4YDL047W GCD10P41814 478 aa5.61□□□□□ -1.51
SIT4YDL047W YGR053CP53234 283 aa5.61□□□□□ -1.51
SIT4YDL047W BIO4P53630 237 aa5.61□□□□□ -1.51
SIT4YDL047W LSM3P57743 89 aaKnown RBP5.61□□□□□ -1.51
SIT4YDL047W SDH1Q00711 640 aa5.61□□□□□ -1.51
SIT4YDL047W YPL109CQ02981 657 aa5.61□□□□□ -1.51
SIT4YDL047W VPS16Q03308 798 aa5.61□□□□□ -1.51
SIT4YDL047W TY2A-DR2Q03483 438 aa5.61□□□□□ -1.51
SIT4YDL047W APC4Q04601 652 aa5.61□□□□□ -1.51
SIT4YDL047W SEC10Q06245 871 aa5.61□□□□□ -1.51
SIT4YDL047W ATG26Q06321 1198 aa5.61□□□□□ -1.51
SIT4YDL047W FRA1Q07825 749 aa5.61□□□□□ -1.51
SIT4YDL047W GPB1Q08886 897 aa5.61□□□□□ -1.51
SIT4YDL047W WTM2Q12206 467 aa5.61□□□□□ -1.51
SIT4YDL047W TY2A-BQ12260 438 aa5.61□□□□□ -1.51
SIT4YDL047W TY2A-OR2Q12293 438 aa5.61□□□□□ -1.51
SIT4YDL047W TY2A-DR1Q12392 438 aa5.61□□□□□ -1.51
SIT4YDL047W TY2A-OR1Q12439 438 aa5.61□□□□□ -1.51
SIT4YDL047W YPR064WQ12492 139 aa5.61□□□□□ -1.51
SIT4YDL047W PAR32Q12515 295 aaKnown RBP5.61□□□□□ -1.51
SIT4YDL047W TY2A-DR3Q99303 438 aa5.61□□□□□ -1.51
SIT4YDL047W LEU4P06208 619 aaKnown RBP5.6□□□□□ -1.51
SIT4YDL047W ILV2P07342 687 aaKnown RBP5.6□□□□□ -1.51
SIT4YDL047W SSA3P09435 649 aaKnown RBP5.6□□□□□ -1.51
SIT4YDL047W RPB10P22139 70 aa5.6□□□□□ -1.51
SIT4YDL047W APN1P22936 367 aa5.6□□□□□ -1.51
SIT4YDL047W GBP2P25555 427 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
SIT4YDL047W STP22P25604 385 aa5.6□□□□□ -1.51
SIT4YDL047W ATG15P25641 520 aa5.6□□□□□ -1.51
SIT4YDL047W HEM3P28789 327 aa5.6□□□□□ -1.51
SIT4YDL047W ZIP1P31111 875 aa5.6□□□□□ -1.51
SIT4YDL047W NUD1P32336 851 aa5.6□□□□□ -1.51
SIT4YDL047W RRN3P36070 627 aa5.6□□□□□ -1.51
SIT4YDL047W SET3P36124 751 aa5.6□□□□□ -1.51
SIT4YDL047W YBR062CP38239 180 aa5.6□□□□□ -1.51
SIT4YDL047W CIN4P39110 191 aa5.6□□□□□ -1.51
SIT4YDL047W SAP1P39955 897 aaKnown RBP5.6□□□□□ -1.51
SIT4YDL047W YEL057CP39983 233 aa5.6□□□□□ -1.51
SIT4YDL047W SMX2P40204 77 aaKnown RBP5.6□□□□□ -1.51
SIT4YDL047W PRM2P40534 656 aa5.6□□□□□ -1.51
SIT4YDL047W YJR039WP47107 1121 aa5.6□□□□□ -1.51
SIT4YDL047W STE24P47154 453 aa5.6□□□□□ -1.51
SIT4YDL047W RAD17P48581 401 aa5.6□□□□□ -1.51
SIT4YDL047W PRP31P49704 494 aaPredicted RBP5.6□□□□□ -1.51
SIT4YDL047W SHE4P51534 789 aa5.6□□□□□ -1.51
SIT4YDL047W IST1P53843 298 aaPredicted RBP5.6□□□□□ -1.51
SIT4YDL047W ELA1P53861 379 aaPredicted RBP5.6□□□□□ -1.51
SIT4YDL047W REC102Q02721 264 aa5.6□□□□□ -1.51
SIT4YDL047W RNY1Q02933 434 aaKnown RBP5.6□□□□□ -1.51
SIT4YDL047W YML119WQ03208 357 aa5.6□□□□□ -1.51
SIT4YDL047W GAS3Q03655 524 aa5.6□□□□□ -1.51
SIT4YDL047W YPR174CQ06616 221 aaPredicted RBP5.6□□□□□ -1.51
SIT4YDL047W CYK3Q07533 885 aa5.6□□□□□ -1.51
SIT4YDL047W YDL121CQ07541 149 aa5.6□□□□□ -1.51
SIT4YDL047W YEH1Q07804 573 aa5.6□□□□□ -1.51
SIT4YDL047W AVO1Q08236 1176 aa5.6□□□□□ -1.51
SIT4YDL047W MCH5Q08777 521 aa5.6□□□□□ -1.51
SIT4YDL047W PRS5Q12265 496 aaKnown RBP5.6□□□□□ -1.51
SIT4YDL047W NKP1Q12493 238 aa5.6□□□□□ -1.51
SIT4YDL047W YCL012CQ8J0M4 134 aa5.6□□□□□ -1.51
SIT4YDL047W YOR032W-AQ8TGS1 66 aa5.6□□□□□ -1.51
SIT4YDL047W STE7P06784 515 aa5.59□□□□□ -1.51
SIT4YDL047W PHO2P07269 559 aa5.59□□□□□ -1.51
SIT4YDL047W ARD1P07347 238 aaPredicted RBP5.59□□□□□ -1.51
SIT4YDL047W YCL042WP25572 119 aa5.59□□□□□ -1.51
SIT4YDL047W HIR2P32480 875 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms