RNA–Protein interactions for RNA: YBR201W

DER1, Transcript of ER membrane protein that promotes export of misfolded polypeptides, yeast

Gene DER1, Length 636 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DER1	YBR201W	REX2	P54964	269 aa	Known RBP	3.59	□□□□□ -1.83
DER1	YBR201W	LSM3	P57743	89 aa	Known RBP	3.59	□□□□□ -1.83
DER1	YBR201W	NHP10	Q03435	203 aa		3.59	□□□□□ -1.83
DER1	YBR201W	FMN1	Q03778	218 aa		3.59	□□□□□ -1.83
DER1	YBR201W	YDR179W-A	Q03983	463 aa		3.59	□□□□□ -1.83
DER1	YBR201W	YET2	Q04210	160 aa		3.59	□□□□□ -1.83
DER1	YBR201W	SEG1	Q04279	960 aa		3.59	□□□□□ -1.83
DER1	YBR201W	YPR114W	Q06107	315 aa		3.59	□□□□□ -1.83
DER1	YBR201W	NDD1	Q08887	554 aa		3.59	□□□□□ -1.83
DER1	YBR201W	YLR046C	Q12253	270 aa		3.59	□□□□□ -1.83
DER1	YBR201W	MDY2	Q12285	212 aa		3.59	□□□□□ -1.83
DER1	YBR201W	PEX11	Q12462	236 aa		3.59	□□□□□ -1.83
DER1	YBR201W	CAR1	P00812	333 aa	Known RBP	3.58	□□□□□ -1.84
DER1	YBR201W	TPK2	P06245	380 aa		3.58	□□□□□ -1.84
DER1	YBR201W	ADE5,7	P07244	802 aa	Known RBP	3.58	□□□□□ -1.84
DER1	YBR201W	STE12	P13574	688 aa		3.58	□□□□□ -1.84
DER1	YBR201W	PMA2	P19657	947 aa		3.58	□□□□□ -1.84
DER1	YBR201W	SIR1	P21691	654 aa		3.58	□□□□□ -1.84
DER1	YBR201W	AAT2	P23542	418 aa	Known RBP	3.58	□□□□□ -1.84
DER1	YBR201W	PHO3	P24031	467 aa		3.58	□□□□□ -1.84
DER1	YBR201W	YCR090C	P25654	182 aa	Known RBP	3.58	□□□□□ -1.84
DER1	YBR201W	AEP1	P32493	518 aa		3.58	□□□□□ -1.84
DER1	YBR201W	SPR1	P32603	445 aa		3.58	□□□□□ -1.84
DER1	YBR201W	PTM1	P32857	523 aa		3.58	□□□□□ -1.84
DER1	YBR201W	NUP120	P35729	1037 aa		3.58	□□□□□ -1.84
DER1	YBR201W	FAT1	P38225	669 aa		3.58	□□□□□ -1.84
DER1	YBR201W	SRP72	P38688	640 aa	Known RBP	3.58	□□□□□ -1.84
DER1	YBR201W	EFM1	P38732	585 aa		3.58	□□□□□ -1.84
DER1	YBR201W	ARB1	P40024	610 aa	Known RBP	3.58	□□□□□ -1.84
DER1	YBR201W	SCS2	P40075	244 aa	Known RBP	3.58	□□□□□ -1.84
DER1	YBR201W	ALG8	P40351	577 aa		3.58	□□□□□ -1.84
DER1	YBR201W	YRB1	P41920	201 aa	Known RBP	3.58	□□□□□ -1.84
DER1	YBR201W	BUD13	P46947	266 aa	Predicted RBP	3.58	□□□□□ -1.84
DER1	YBR201W	SIP4	P46954	829 aa		3.58	□□□□□ -1.84
DER1	YBR201W	COG2	P53271	262 aa		3.58	□□□□□ -1.84
DER1	YBR201W	NOP19	P53317	196 aa	Predicted RBP	3.58	□□□□□ -1.84
DER1	YBR201W	CUS2	P53830	285 aa	Predicted RBP	3.58	□□□□□ -1.84
DER1	YBR201W	YNL058C	P53947	316 aa		3.58	□□□□□ -1.84
DER1	YBR201W	VAC7	P53950	1165 aa		3.58	□□□□□ -1.84
DER1	YBR201W	YNL010W	P53981	241 aa	Known RBP	3.58	□□□□□ -1.84
DER1	YBR201W	RMI1	Q02685	241 aa		3.58	□□□□□ -1.84
DER1	YBR201W	PIR1	Q03178	341 aa		3.58	□□□□□ -1.84
DER1	YBR201W	HOT1	Q03213	719 aa		3.58	□□□□□ -1.84
DER1	YBR201W	YDR476C	Q03362	224 aa		3.58	□□□□□ -1.84
DER1	YBR201W	ACL4	Q03771	387 aa		3.58	□□□□□ -1.84
DER1	YBR201W	BCP1	Q06338	283 aa		3.58	□□□□□ -1.84
DER1	YBR201W	YPR202W	Q08993	238 aa		3.58	□□□□□ -1.84
DER1	YBR201W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
DER1	YBR201W	RRP36	Q12481	300 aa	Predicted RBP	3.58	□□□□□ -1.84
DER1	YBR201W	RMD5	Q12508	421 aa		3.58	□□□□□ -1.84
DER1	YBR201W	YPL247C	Q12523	523 aa		3.58	□□□□□ -1.84
DER1	YBR201W	PHO5	P00635	467 aa		3.57	□□□□□ -1.84
DER1	YBR201W	RPL24A	P04449	155 aa	Known RBP	3.57	□□□□□ -1.84
DER1	YBR201W	HEM2	P05373	342 aa		3.57	□□□□□ -1.84
DER1	YBR201W	MNE1	P24720	663 aa		3.57	□□□□□ -1.84
DER1	YBR201W	GEX1	P25596	615 aa		3.57	□□□□□ -1.84
DER1	YBR201W	MRPL9	P31334	269 aa		3.57	□□□□□ -1.84
DER1	YBR201W	ORC2	P32833	620 aa		3.57	□□□□□ -1.84
DER1	YBR201W	TFC3	P34111	1160 aa		3.57	□□□□□ -1.84
DER1	YBR201W	SIP2	P34164	415 aa	Known RBP	3.57	□□□□□ -1.84
DER1	YBR201W	SKT5	P34226	696 aa		3.57	□□□□□ -1.84
DER1	YBR201W	PTC1	P35182	281 aa		3.57	□□□□□ -1.84
DER1	YBR201W	STB6	P36085	766 aa		3.57	□□□□□ -1.84
DER1	YBR201W	ALY1	P36117	915 aa		3.57	□□□□□ -1.84
DER1	YBR201W	FLO10	P36170	1169 aa		3.57	□□□□□ -1.84
DER1	YBR201W	GEX2	P36173	615 aa		3.57	□□□□□ -1.84
DER1	YBR201W	LDB7	P38210	180 aa		3.57	□□□□□ -1.84
DER1	YBR201W	TSC10	P38342	320 aa		3.57	□□□□□ -1.84
DER1	YBR201W	EXO1	P39875	702 aa		3.57	□□□□□ -1.84
DER1	YBR201W	MOB1	P40484	314 aa		3.57	□□□□□ -1.84
DER1	YBR201W	AIM23	P47015	356 aa		3.57	□□□□□ -1.84
DER1	YBR201W	EFM5	P53200	248 aa	Known RBP	3.57	□□□□□ -1.84
DER1	YBR201W	YGR054W	P53235	642 aa	Known RBP	3.57	□□□□□ -1.84
DER1	YBR201W	CLD1	P53264	445 aa		3.57	□□□□□ -1.84
DER1	YBR201W	GTR2	P53290	341 aa		3.57	□□□□□ -1.84
DER1	YBR201W	SNF12	P53628	566 aa		3.57	□□□□□ -1.84
DER1	YBR201W	SLM2	P53955	656 aa		3.57	□□□□□ -1.84
DER1	YBR201W	YNL034W	P53963	612 aa		3.57	□□□□□ -1.84
DER1	YBR201W	YNL018C	P53976	612 aa		3.57	□□□□□ -1.84
DER1	YBR201W	OSH6	Q02201	448 aa		3.57	□□□□□ -1.84
DER1	YBR201W	YPL014W	Q02606	381 aa		3.57	□□□□□ -1.84
DER1	YBR201W	GOT1	Q03554	138 aa		3.57	□□□□□ -1.84
DER1	YBR201W	YDR131C	Q03899	556 aa		3.57	□□□□□ -1.84
DER1	YBR201W	FAR10	Q06001	478 aa		3.57	□□□□□ -1.84
DER1	YBR201W	BLS1	Q06071	122 aa		3.57	□□□□□ -1.84
DER1	YBR201W	RIF2	Q06208	395 aa		3.57	□□□□□ -1.84
DER1	YBR201W	MCP2	Q06567	569 aa		3.57	□□□□□ -1.84
DER1	YBR201W	SGT1	Q08446	395 aa		3.57	□□□□□ -1.84
DER1	YBR201W	ESA1	Q08649	445 aa		3.57	□□□□□ -1.84
DER1	YBR201W	TGS1	Q12052	315 aa		3.57	□□□□□ -1.84
DER1	YBR201W	COS2	P0CX12	379 aa		3.56	□□□□□ -1.84
DER1	YBR201W	COS3	P0CX13	379 aa		3.56	□□□□□ -1.84
DER1	YBR201W	CDC26	P14724	124 aa		3.56	□□□□□ -1.84
DER1	YBR201W	SPS22	P25380	463 aa		3.56	□□□□□ -1.84
DER1	YBR201W	ZIP1	P31111	875 aa		3.56	□□□□□ -1.84
DER1	YBR201W	SYN8	P31377	255 aa		3.56	□□□□□ -1.84
DER1	YBR201W	SIN4	P32259	974 aa		3.56	□□□□□ -1.84
DER1	YBR201W	PRP18	P33411	251 aa	Predicted RBP	3.56	□□□□□ -1.84
DER1	YBR201W	YBL029W	P38201	376 aa		3.56	□□□□□ -1.84
DER1	YBR201W	CDS1	P38221	457 aa		3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms