RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 YOR338WQ99326 363 aa8.39□□□□□ -1.07
LSR1LSR1 NFT1P0CE68 1218 aa8.38□□□□□ -1.07
LSR1LSR1 HMG2P12684 1045 aa8.38□□□□□ -1.07
LSR1LSR1 UNG1P12887 359 aa8.38□□□□□ -1.07
LSR1LSR1 THR1P17423 357 aaKnown RBP8.38□□□□□ -1.07
LSR1LSR1 KGD1P20967 1014 aaKnown RBP8.38□□□□□ -1.07
LSR1LSR1 SGV1P23293 657 aaKnown RBP8.38□□□□□ -1.07
LSR1LSR1 ARA1P38115 344 aa8.38□□□□□ -1.07
LSR1LSR1 COG3P40094 801 aa8.38□□□□□ -1.07
LSR1LSR1 VHS1Q03785 461 aa8.38□□□□□ -1.07
LSR1LSR1 MUS81Q04149 632 aaPredicted RBP8.38□□□□□ -1.07
LSR1LSR1 PEX10Q05568 337 aa8.38□□□□□ -1.07
LSR1LSR1 RSC3Q06639 885 aa8.38□□□□□ -1.07
LSR1LSR1 MDM36Q06820 579 aa8.38□□□□□ -1.07
LSR1LSR1 NGL1Q08213 363 aaKnown RBP8.38□□□□□ -1.07
LSR1LSR1 BUD7Q08754 746 aa8.38□□□□□ -1.07
LSR1LSR1 GTT2Q12390 233 aa8.38□□□□□ -1.07
LSR1LSR1 AI3P03877 415 aa8.37□□□□□ -1.07
LSR1LSR1 ARF2P19146 181 aaKnown RBP8.37□□□□□ -1.07
LSR1LSR1 GRR1P24814 1151 aa8.37□□□□□ -1.07
LSR1LSR1 ACH1P32316 526 aa8.37□□□□□ -1.07
LSR1LSR1 MEI5P32489 222 aa8.37□□□□□ -1.07
LSR1LSR1 SPS19P32573 292 aaKnown RBP8.37□□□□□ -1.07
LSR1LSR1 HCS1P34243 683 aa8.37□□□□□ -1.07
LSR1LSR1 MAC1P35192 417 aa8.37□□□□□ -1.07
LSR1LSR1 ARN2P38724 620 aa8.37□□□□□ -1.07
LSR1LSR1 SSN3P39073 555 aa8.37□□□□□ -1.07
LSR1LSR1 GDH3P39708 457 aa8.37□□□□□ -1.07
LSR1LSR1 AST2P39945 430 aaKnown RBP8.37□□□□□ -1.07
LSR1LSR1 SPO73P40031 143 aa8.37□□□□□ -1.07
LSR1LSR1 FCY21P40039 528 aa8.37□□□□□ -1.07
LSR1LSR1 AIM23P47015 356 aa8.37□□□□□ -1.07
LSR1LSR1 TOM22P49334 152 aa8.37□□□□□ -1.07
LSR1LSR1 MNT2P53059 558 aa8.37□□□□□ -1.07
LSR1LSR1 HST3P53687 447 aa8.37□□□□□ -1.07
LSR1LSR1 PRM1P53835 661 aa8.37□□□□□ -1.07
LSR1LSR1 GIP3Q03016 1276 aa8.37□□□□□ -1.07
LSR1LSR1 GRX3Q03835 250 aa8.37□□□□□ -1.07
LSR1LSR1 YLR345WQ06137 509 aa8.37□□□□□ -1.07
LSR1LSR1 NEJ1Q06148 342 aa8.37□□□□□ -1.07
LSR1LSR1 SGO1Q08490 590 aa8.37□□□□□ -1.07
LSR1LSR1 SMF3Q12078 473 aaPredicted RBP8.37□□□□□ -1.07
LSR1LSR1 RRP42Q12277 265 aaPredicted RBP8.37□□□□□ -1.07
LSR1LSR1 YLR126CQ12288 251 aa8.37□□□□□ -1.07
LSR1LSR1 YPR096CO13587 100 aa8.36□□□□□ -1.07
LSR1LSR1 LEU4P06208 619 aaKnown RBP8.36□□□□□ -1.07
LSR1LSR1 CDC4P07834 779 aa8.36□□□□□ -1.07
LSR1LSR1 RSR1P13856 272 aa8.36□□□□□ -1.07
LSR1LSR1 APA1P16550 321 aaKnown RBP8.36□□□□□ -1.07
LSR1LSR1 PPH22P23595 377 aa8.36□□□□□ -1.07
LSR1LSR1 CMK1P27466 446 aaKnown RBP8.36□□□□□ -1.07
LSR1LSR1 LIP5P32875 414 aa8.36□□□□□ -1.07
LSR1LSR1 YPT52P36018 234 aaKnown RBP8.36□□□□□ -1.07
LSR1LSR1 YBR071WP38243 211 aa8.36□□□□□ -1.07
LSR1LSR1 COS111P38308 924 aa8.36□□□□□ -1.07
LSR1LSR1 YHR033WP38690 423 aa8.36□□□□□ -1.07
LSR1LSR1 DBP8P38719 431 aa8.36□□□□□ -1.07
LSR1LSR1 VMA22P38784 181 aa8.36□□□□□ -1.07
LSR1LSR1 PCL5P38794 229 aa8.36□□□□□ -1.07
LSR1LSR1 DDI1P40087 428 aa8.36□□□□□ -1.07
LSR1LSR1 REF2P42073 533 aaPredicted RBP8.36□□□□□ -1.07
LSR1LSR1 ALR2P43553 858 aa8.36□□□□□ -1.07
LSR1LSR1 CWC23P52868 283 aaPredicted RBP8.36□□□□□ -1.07
LSR1LSR1 RAI1P53063 387 aaKnown RBP8.36□□□□□ -1.07
LSR1LSR1 PRM8P53174 237 aa8.36□□□□□ -1.07
LSR1LSR1 CIA1Q05583 330 aa8.36□□□□□ -1.07
LSR1LSR1 NOP12Q08208 459 aaKnown RBP8.36□□□□□ -1.07
LSR1LSR1 GSH2Q08220 491 aa8.36□□□□□ -1.07
LSR1LSR1 SAM4Q08985 325 aaKnown RBP8.36□□□□□ -1.07
LSR1LSR1 RPN5Q12250 445 aaKnown RBP8.36□□□□□ -1.07
LSR1LSR1 DCP1Q12517 231 aaPredicted RBP8.36□□□□□ -1.07
LSR1LSR1 PBS2P08018 668 aa8.35□□□□□ -1.07
LSR1LSR1 RPP1BP10622 106 aaKnown RBP8.35□□□□□ -1.07
LSR1LSR1 SLM5P25345 492 aaKnown RBP8.35□□□□□ -1.07
LSR1LSR1 YCL049CP25577 312 aa8.35□□□□□ -1.07
LSR1LSR1 YCR016WP25617 290 aaKnown RBP8.35□□□□□ -1.07
LSR1LSR1 GLG1P36143 616 aa8.35□□□□□ -1.07
LSR1LSR1 LDH1P38139 375 aa8.35□□□□□ -1.07
LSR1LSR1 SEA4P38164 1038 aa8.35□□□□□ -1.07
LSR1LSR1 LAS21P40367 830 aa8.35□□□□□ -1.07
LSR1LSR1 CAK1P43568 368 aaPredicted RBP8.35□□□□□ -1.07
LSR1LSR1 PMT4P46971 762 aa8.35□□□□□ -1.07
LSR1LSR1 BIT61P47041 543 aa8.35□□□□□ -1.07
LSR1LSR1 MUP1P50276 574 aa8.35□□□□□ -1.07
LSR1LSR1 ARO8P53090 500 aaKnown RBP8.35□□□□□ -1.07
LSR1LSR1 YGR015CP53208 328 aa8.35□□□□□ -1.07
LSR1LSR1 AAT1Q01802 451 aa8.35□□□□□ -1.07
LSR1LSR1 SMA1Q02651 245 aa8.35□□□□□ -1.07
LSR1LSR1 YML108WQ03759 105 aa8.35□□□□□ -1.07
LSR1LSR1 VPS74Q06385 345 aa8.35□□□□□ -1.07
LSR1LSR1 PER33Q12144 273 aa8.35□□□□□ -1.07
LSR1LSR1 GLE1Q12315 538 aa8.35□□□□□ -1.07
LSR1LSR1 ATP4P05626 244 aa8.34□□□□□ -1.07
LSR1LSR1 RDS2P19541 446 aaKnown RBP8.34□□□□□ -1.07
LSR1LSR1 GSH1P32477 678 aa8.34□□□□□ -1.07
LSR1LSR1 BAP2P38084 609 aa8.34□□□□□ -1.07
LSR1LSR1 YHR078WP38799 552 aa8.34□□□□□ -1.07
LSR1LSR1 SOK1P40317 901 aa8.34□□□□□ -1.07
LSR1LSR1 YFL066CP43538 392 aa8.34□□□□□ -1.07
LSR1LSR1 ROM1P53046 1155 aa8.34□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms