RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 ACTN2P35609 894 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 CATSPERGQ6ZRH7 1159 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 FCHSD1Q86WN1 690 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 MMP19Q99542 508 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 UBA5Q9GZZ9 404 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 LY9Q9HBG7 655 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 SAGE1Q9NXZ1 904 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 NOP56O00567 594 aaKnown RBP6.28□□□□□ -1.4
RTTN-218ENST00000640408 NDUFAB1O14561 156 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 ICAM1P05362 532 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 ZNF165P49910 485 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 STXBP2Q15833 593 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 BLIDQ8IZY5 108 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 MSL3Q8N5Y2 521 aaKnown RBP6.28□□□□□ -1.4
RTTN-218ENST00000640408 NKX2-3Q8TAU0 364 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 ACER1Q8TDN7 264 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 IGDCC4Q8TDY8 1250 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 TRIM47Q96LD4 638 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 GBP5Q96PP8 586 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 WDR11Q9BZH6 1224 aa6.28□□□□□ -1.4
RTTN-218ENST00000640408 STMN4Q9H169 189 aaPredicted RBP6.28□□□□□ -1.4
RTTN-218ENST00000640408 ASCC2Q9H1I8 757 aaPredicted RBP6.28□□□□□ -1.4
RTTN-218ENST00000640408 AK9Q5TCS8 1911 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 A0A0G2JLL6 359 aaPredicted RBP6.27□□□□□ -1.41
RTTN-218ENST00000640408 SMIM24O75264 130 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 UBA7P41226 1012 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 TROAPQ12815 778 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 DYNC1I2Q13409 638 aaKnown RBP6.27□□□□□ -1.41
RTTN-218ENST00000640408 SYT10Q6XYQ8 523 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 KCTD1Q719H9 257 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 PRRT2Q7Z6L0 340 aaPredicted RBP6.27□□□□□ -1.41
RTTN-218ENST00000640408 ARMC2Q8NEN0 867 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 FAM210AQ96ND0 272 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 TRIM7Q9C029 511 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 SPATC1LQ9H0A9 340 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 VCX3BQ9H321 246 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 VCX3AQ9NNX9 186 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 PRDM4Q9UKN5 801 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 NEDD4P46934 1319 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 PALM3A6NDB9 673 aaPredicted RBP6.27□□□□□ -1.41
RTTN-218ENST00000640408 TRPA1O75762 1119 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 SSBP05455 408 aaKnown RBP eCLIP6.27□□□□□ -1.41
RTTN-218ENST00000640408 BRD3Q15059 726 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 QRICH1Q2TAL8 776 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 ZFPM1Q8IX07 1006 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 SAAL1Q96ER3 474 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 CALML4Q96GE6 196 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 AZI2Q9H6S1 392 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 NRBP1Q9UHY1 535 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 AFG3L2Q9Y4W6 797 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 AMPD3Q01432 767 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 PPP2R3AQ06190 1150 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 SPA17Q15506 151 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 HAUS3Q68CZ6 603 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 STXBP4Q6ZWJ1 553 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 CACNA2D4Q7Z3S7 1137 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 RIOX2Q8IUF8 465 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 N4BP2Q86UW6 1770 aaPredicted RBP6.27□□□□□ -1.41
RTTN-218ENST00000640408 CTAGE9A4FU28 777 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 LAD1O00515 517 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 STX6O43752 255 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 NOL3O60936 208 aaKnown RBP6.27□□□□□ -1.41
RTTN-218ENST00000640408 CCND2P30279 289 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 ADD1P35611 737 aaKnown RBP6.27□□□□□ -1.41
RTTN-218ENST00000640408 RAD51AP2Q09MP3 1159 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 APBB1IPQ7Z5R6 666 aaPredicted RBP6.27□□□□□ -1.41
RTTN-218ENST00000640408 CCDC65Q8IXS2 484 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 DIS3L2Q8IYB7 885 aaKnown RBP6.27□□□□□ -1.41
RTTN-218ENST00000640408 EXOC4Q96A65 974 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 ATG4CQ96DT6 458 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 SAMD15Q9P1V8 674 aa6.27□□□□□ -1.41
RTTN-218ENST00000640408 FRMPD2Q68DX3 1309 aaPredicted RBP6.27□□□□□ -1.41
RTTN-218ENST00000640408 TTC36A6NLP5 189 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 PPP1R12AO14974 1030 aaPredicted RBP6.26□□□□□ -1.41
RTTN-218ENST00000640408 TLR2O60603 784 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 EGFRP00533 1210 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 GJB2P29033 226 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 SEC23AQ15436 765 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 SLFN12Q8IYM2 578 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 KCNG4Q8TDN1 519 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 SCFD2Q8WU76 684 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 RMDN2Q96LZ7 410 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 ALS2CR12Q96Q35 445 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 IWS1Q96ST2 819 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 SEZ6LQ9BYH1 1024 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 TNRC6CQ9HCJ0 1690 aaKnown RBP6.26□□□□□ -1.41
RTTN-218ENST00000640408 KPNA6O60684 536 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 TTLL4Q14679 1199 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 PFKFB3Q16875 520 aaPredicted RBP6.26□□□□□ -1.41
RTTN-218ENST00000640408 USH1GQ495M9 461 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 KRT79Q5XKE5 535 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 CYP4F22Q6NT55 531 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 LBX2Q6XYB7 198 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 GPR161Q8N6U8 529 aaKnown RBP6.26□□□□□ -1.41
RTTN-218ENST00000640408 ARRDC4Q8NCT1 418 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 FBXO18Q8NFZ0 1043 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 VTI1AQ96AJ9 217 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 AGXT2Q9BYV1 514 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 HOMER2Q9NSB8 354 aa6.26□□□□□ -1.41
RTTN-218ENST00000640408 DIS3Q9Y2L1 958 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms