RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 DIS3Q9Y2L1 958 aaKnown RBP6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 PCDHB6Q9Y5E3 794 aa6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 SNAI1O95863 264 aaPredicted RBP6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 GH1P01241 217 aa6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 CCL5P13501 91 aa6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 PDIA4P13667 645 aaKnown RBP6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 USP11P51784 963 aa6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 BEX3Q00994 111 aa6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 DHX8Q14562 1220 aaKnown RBP6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 PKN2Q16513 984 aaKnown RBP6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 CHAMP1Q96JM3 812 aa6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 SPATA32Q96LK8 384 aa6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 PANK2Q9BZ23 570 aa6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 FTOQ9C0B1 505 aaKnown RBP eCLIP6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 AZI2Q9H6S1 392 aa6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 PRDM10Q9NQV6 1147 aa6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 KCNH7Q9NS40 1196 aa6.56□□□□□ -1.36
HNRNPU-220ENST00000639667 VWA3AA6NCI4 1184 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 GOLGA6L22H0YM25 854 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 PTGS1P23219 599 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 NEDD9Q14511 834 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 PLIN2Q99541 437 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 XPNPEP3Q9NQH7 507 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 DNAJC25-GNG10A0A024R161 153 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 KBTBD13C9JR72 458 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 IPO5O00410 1097 aaKnown RBP6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 ZEB2O60315 1214 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 XRCC5P13010 732 aaKnown RBP6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 GCFC2P16383 781 aaKnown RBP6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 MARK3P27448 753 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 TECP42680 631 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 MRPS9P82933 396 aaKnown RBP6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 PTGDRQ13258 359 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 DTHD1Q6ZMT9 781 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 RAB34Q9BZG1 259 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 JADE2Q9NQC1 790 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 CFAP45Q9UL16 551 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 PCDHA12Q9UN75 941 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 FAM86B1E9PN63 330 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 FAM86B2P0C5J1 330 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 OR52Z1P0C646 297 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 RESTQ13127 1097 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 IRF5Q13568 498 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 SPECC1Q5M775 1068 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 OLFML2BQ68BL8 750 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 IQSEC1Q6DN90 963 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 XRRA1Q6P2D8 792 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 FAM177A1Q8N128 213 aaPredicted RBP6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 PPP1R13LQ8WUF5 828 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 AFG1LQ8WV93 481 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 GPRASP2Q96D09 838 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 NOD1Q9Y239 953 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 CLIC4Q9Y696 253 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 RPTORQ8N122 1335 aa6.55□□□□□ -1.36
HNRNPU-220ENST00000639667 GREB1LQ9C091 1923 aaPredicted RBP6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 SYNGAP1Q96PV0 1343 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 SLC37A4O43826 429 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 HOXC6P09630 235 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 ATN1P54259 1190 aaPredicted RBP6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 IGBP1P78318 339 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 SETQ01105 290 aaPredicted RBP6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 CYP4A11Q02928 519 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 KCNV1Q6PIU1 500 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 RNF180Q86T96 592 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 TLK2Q86UE8 772 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 PXYLP1Q8TE99 480 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 USP28Q96RU2 1077 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 SLC9A2Q9UBY0 812 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 SMPD1P17405 629 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 ITGB5P18084 799 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 TXLNAP40222 546 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 UBA7P41226 1012 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 ZNF467Q7Z7K2 595 aaPredicted RBP6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 TPH2Q8IWU9 490 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 ERMNQ8TAM6 284 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 TTC12Q9H892 705 aaPredicted RBP6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 LRWD1Q9UFC0 647 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 DDX20Q9UHI6 824 aaKnown RBP6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 CIZ1Q9ULV3 898 aaPredicted RBP6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 TRPC6Q9Y210 931 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 MSH4O15457 936 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 SEPT4O43236 478 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 ATP9AO75110 1047 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 STAM2O75886 525 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 BMP15O95972 392 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 IBSPP21815 317 aaPredicted RBP6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 U2AF2P26368 475 aaKnown RBP eCLIP6.54□□□□□ -1.361e-10■■□□□ 12.3
HNRNPU-220ENST00000639667 CCT6AP40227 531 aaKnown RBP6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 TRAPPC10P48553 1259 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 SOX10P56693 466 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 NPY5RQ15761 445 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 TMEM63BQ5T3F8 832 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 COL13A1Q5TAT6 717 aaPredicted RBP6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 SLFN12Q8IYM2 578 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 MSL3Q8N5Y2 521 aaKnown RBP6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 PDILTQ8N807 584 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 ARRDC4Q8NCT1 418 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 GIMAP8Q8ND71 665 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms