RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CDR1P51861 262 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 PSMD2Q13200 908 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 CEP85LQ5SZL2 805 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 C6orf89Q6UWU4 347 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 RUFY4Q6ZNE9 571 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 DHX37Q8IY37 1157 aaKnown RBP16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 STAG2Q8N3U4 1231 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 ZNF384Q8TF68 577 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 ZMYND12Q9H0C1 365 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 ISCUQ9H1K1 167 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 E7EVH7 732 aa16.31■□□□□ 0.2
CACNA1A-220ENST00000635988 MYBP10242 640 aa16.31■□□□□ 0.2
CACNA1A-220ENST00000635988 BIRC3Q13489 604 aa16.31■□□□□ 0.2
CACNA1A-220ENST00000635988 LETM2Q2VYF4 491 aa16.31■□□□□ 0.2
CACNA1A-220ENST00000635988 CCDC121Q6ZUS5 278 aa16.31■□□□□ 0.2
CACNA1A-220ENST00000635988 CCDC50Q8IVM0 306 aa16.31■□□□□ 0.2
CACNA1A-220ENST00000635988 TAF4BQ92750 862 aa16.31■□□□□ 0.2
CACNA1A-220ENST00000635988 JPH2Q9BR39 696 aaPredicted RBP16.31■□□□□ 0.2
CACNA1A-220ENST00000635988 MAD2L2Q9UI95 211 aa16.31■□□□□ 0.2
CACNA1A-220ENST00000635988 LAMB1P07942 1786 aa16.31■□□□□ 0.2
CACNA1A-220ENST00000635988 GNA11P29992 359 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 HDLBPQ00341 1268 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 TFAP4Q01664 338 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 IFT88Q13099 833 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 ARMC9Q7Z3E5 817 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 NEK8Q86SG6 692 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 CCDC13Q8IYE1 715 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 USP38Q8NB14 1042 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 MYH1P12882 1939 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 ZSCAN5CA6NGD5 496 aaPredicted RBP16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 RASSF9O75901 435 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 TECP42680 631 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 SEC24CP53992 1094 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 SLC18A3Q16572 532 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 LRRC55Q6ZSA7 311 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 TANGO6Q9C0B7 1094 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 C6orf50Q9HD87 102 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 ATP6V0A2Q9Y487 856 aa16.3■□□□□ 0.2
CACNA1A-220ENST00000635988 GMNCA6NCL1 334 aa16.29■□□□□ 0.2
CACNA1A-220ENST00000635988 MECOMQ03112 1051 aa16.29■□□□□ 0.2
CACNA1A-220ENST00000635988 HPS3Q969F9 1004 aa16.29■□□□□ 0.2
CACNA1A-220ENST00000635988 CYFIP2Q96F07 1278 aa16.29■□□□□ 0.2
CACNA1A-220ENST00000635988 MMTAG2Q9BU76 263 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-220ENST00000635988 TMEM59LQ9UK28 342 aa16.29■□□□□ 0.2
CACNA1A-220ENST00000635988 ITGB4P16144 1822 aa16.29■□□□□ 0.2
CACNA1A-220ENST00000635988 KIF1CO43896 1103 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-220ENST00000635988 NTSR2O95665 410 aa16.29■□□□□ 0.2
CACNA1A-220ENST00000635988 FTCDO95954 541 aa16.29■□□□□ 0.2
CACNA1A-220ENST00000635988 NEDD9Q14511 834 aa16.29■□□□□ 0.2
CACNA1A-220ENST00000635988 TAX1BP1Q86VP1 789 aa16.29■□□□□ 0.2
CACNA1A-220ENST00000635988 LARP4BQ92615 738 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-220ENST00000635988 CDK5RAP3Q96JB5 506 aa16.29■□□□□ 0.2
CACNA1A-220ENST00000635988 MYMKA6NI61 221 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 BTNL10A8MVZ5 291 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 RAD51CO43502 376 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 CYP2D6P10635 497 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 KCNMA1Q12791 1236 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 MTMR3Q13615 1198 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 HLTFQ14527 1009 aaKnown RBP eCLIP16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 IFI16Q16666 785 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 FAM83BQ5T0W9 1011 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 C10orf76Q5T2E6 689 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 GIMAP7Q8NHV1 300 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 P3H4Q92791 437 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 PBKQ96KB5 322 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 FAM84BQ96KN1 310 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 IL17RBQ9NRM6 502 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 TMCO5BA8MYB1 307 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 KLRC1P26715 233 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 NAPAP54920 295 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 FKBP3Q00688 224 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 EVX2Q03828 476 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 EHHADHQ08426 723 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 ZKSCAN4Q969J2 545 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 CALR3Q96L12 384 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 CCDC114Q96M63 670 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 RAB34Q9BZG1 259 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 BLOC1S4Q9NUP1 217 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 COL4A3BPQ9Y5P4 624 aa16.28■□□□□ 0.2
CACNA1A-220ENST00000635988 PALM3A6NDB9 673 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 CYTH3O43739 400 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 C21orf2O43822 256 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 GNA14O95837 355 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 GRB10Q13322 594 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 RPS6KA1Q15418 735 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 KIAA0753Q2KHM9 967 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 TMEM266Q2M3C6 531 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 PREPLQ4J6C6 727 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 AGBL2Q5U5Z8 902 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 SPZ1Q9BXG8 430 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 SLC40A1Q9NP59 571 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 NLRC4Q9NPP4 1024 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 PPANQ9NQ55 473 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 BSDC1Q9NW68 430 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 MCM9Q9NXL9 1143 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 HPDP32754 393 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 HSD17B3P37058 310 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 SEPT2Q15019 361 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 FBXO33Q7Z6M2 555 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 TBC1D5Q92609 795 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms