RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 COL4A3BPQ9Y5P4 624 aa11.85□□□□□ -0.51
PSPC1-207ENST00000635251 GOLGA6BA6NDN3 693 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 F8W031 263 aaPredicted RBP11.84□□□□□ -0.51
PSPC1-207ENST00000635251 NCK2O43639 380 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 BUB1O43683 1085 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 LCA5LO95447 670 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 PRLRP16471 622 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 NOVP48745 357 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 FKBP3Q00688 224 aaKnown RBP11.84□□□□□ -0.51
PSPC1-207ENST00000635251 VPS72Q15906 364 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 EZH2Q15910 746 aaKnown RBP11.84□□□□□ -0.51
PSPC1-207ENST00000635251 PPP4R3AQ6IN85 833 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 SND1Q7KZF4 910 aaKnown RBP eCLIP11.84□□□□□ -0.51
PSPC1-207ENST00000635251 ADGRF4Q8IZF3 695 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 PROM2Q8N271 834 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 SPATA4Q8NEY3 305 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 BAP1Q92560 729 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 CUL5Q93034 780 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 GJA10Q969M2 543 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 NOX5Q96PH1 765 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 TRIM34Q9BYJ4 488 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 GAKO14976 1311 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 EDIL3O43854 480 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 TTLL1O95922 423 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 MRPL12P52815 198 aaKnown RBP11.84□□□□□ -0.51
PSPC1-207ENST00000635251 GTF2IP78347 998 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 ECM1Q16610 540 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 SLC9C1Q4G0N8 1177 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 FAM26FQ5R3K3 315 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 SFMBT2Q5VUG0 894 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 PPP1R18Q6NYC8 613 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 NELFCDQ8IXH7 590 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 UIMC1Q96RL1 719 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 JMJD4Q9H9V9 463 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 PCDHA12Q9UN75 941 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 DAGLAQ9Y4D2 1042 aa11.84□□□□□ -0.51
PSPC1-207ENST00000635251 CDK5RAP2Q96SN8 1893 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 BTAF1O14981 1849 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 MPHOSPH10O00566 681 aaKnown RBP11.83□□□□□ -0.52
PSPC1-207ENST00000635251 RAD21O60216 631 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 RPS6KA5O75582 802 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 PRPF6O94906 941 aaKnown RBP11.83□□□□□ -0.52
PSPC1-207ENST00000635251 SLC16A2P36021 539 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 SLC1A4P43007 532 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 MRPS25P82663 173 aaKnown RBP11.83□□□□□ -0.52
PSPC1-207ENST00000635251 SLC7A5Q01650 507 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 ITIH3Q06033 890 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 ZNF543Q08ER8 600 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 KCNMA1Q12791 1236 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 TTBK2Q6IQ55 1244 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 HDAC7Q8WUI4 952 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 LSM14BQ9BX40 385 aaKnown RBP11.83□□□□□ -0.52
PSPC1-207ENST00000635251 EDEM3Q9BZQ6 932 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 NT5C3AQ9H0P0 336 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 SMARCAL1Q9NZC9 954 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 EHD2Q9NZN4 543 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 CEP72Q9P209 647 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 POLLQ9UGP5 575 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 RRP15Q9Y3B9 282 aaKnown RBP11.83□□□□□ -0.52
PSPC1-207ENST00000635251 PLIN4Q96Q06 1357 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 KDM3AQ9Y4C1 1321 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 SSU72P8A0A1W2PR75 194 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 E9PMD0 336 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 MYO1CO00159 1063 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 PJA2O43164 708 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 KRT18P05783 430 aaKnown RBP11.83□□□□□ -0.52
PSPC1-207ENST00000635251 SNHG28P0DPA3 235 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 EPS15P42566 896 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 EHHADHQ08426 723 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
PSPC1-207ENST00000635251 SEPT2Q15019 361 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 LRRC31Q6UY01 552 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 SRLQ86TD4 932 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 CCDC65Q8IXS2 484 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 TBC1D16Q8TBP0 767 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 AENQ8WTP8 325 aaKnown RBP11.83□□□□□ -0.52
PSPC1-207ENST00000635251 HAS1Q92839 578 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 NUCKS1Q9H1E3 243 aaKnown RBP11.83□□□□□ -0.52
PSPC1-207ENST00000635251 PSTPIP2Q9H939 334 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 LUC7LQ9NQ29 371 aaKnown RBP11.83□□□□□ -0.52
PSPC1-207ENST00000635251 DMGDHQ9UI17 866 aaKnown RBP11.83□□□□□ -0.52
PSPC1-207ENST00000635251 LCMT1Q9UIC8 334 aa11.83□□□□□ -0.52
PSPC1-207ENST00000635251 RIMBP2O15034 1052 aa11.82□□□□□ -0.52
PSPC1-207ENST00000635251 PPP1R11O60927 126 aaPredicted RBP11.82□□□□□ -0.52
PSPC1-207ENST00000635251 POLR2FP61218 127 aaKnown RBP11.82□□□□□ -0.52
PSPC1-207ENST00000635251 CACNB1Q02641 598 aaPredicted RBP11.82□□□□□ -0.52
PSPC1-207ENST00000635251 C8orf74Q6P047 294 aa11.82□□□□□ -0.52
PSPC1-207ENST00000635251 FOXR1Q6PIV2 292 aa11.82□□□□□ -0.52
PSPC1-207ENST00000635251 ZNF572Q7Z3I7 529 aaPredicted RBP11.82□□□□□ -0.52
PSPC1-207ENST00000635251 C10orf67Q8IYJ2 551 aa11.82□□□□□ -0.52
PSPC1-207ENST00000635251 FAM76AQ8TAV0 307 aa11.82□□□□□ -0.52
PSPC1-207ENST00000635251 RUBCNQ92622 972 aa11.82□□□□□ -0.52
PSPC1-207ENST00000635251 DNAJC19Q96DA6 116 aa11.82□□□□□ -0.52
PSPC1-207ENST00000635251 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.82□□□□□ -0.52
PSPC1-207ENST00000635251 ZHX3Q9H4I2 956 aa11.82□□□□□ -0.52
PSPC1-207ENST00000635251 RSPH14Q9UHP6 348 aa11.82□□□□□ -0.52
PSPC1-207ENST00000635251 FEZ2Q9UHY8 353 aaPredicted RBP11.82□□□□□ -0.52
PSPC1-207ENST00000635251 SALL4Q9UJQ4 1053 aa11.82□□□□□ -0.52
PSPC1-207ENST00000635251 KIAA1024Q9UPX6 916 aa11.82□□□□□ -0.52
PSPC1-207ENST00000635251 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms