RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 RBL2Q08999 1139 aa19.2■□□□□ 0.66
PDCD6-214ENST00000628729 MFSD10Q14728 455 aa19.2■□□□□ 0.66
PDCD6-214ENST00000628729 PPP2R2DQ66LE6 453 aa19.2■□□□□ 0.66
PDCD6-214ENST00000628729 FCHSD1Q86WN1 690 aa19.2■□□□□ 0.66
PDCD6-214ENST00000628729 ZNF654Q8IZM8 581 aa19.2■□□□□ 0.66
PDCD6-214ENST00000628729 GAS2L1Q99501 681 aaPredicted RBP19.2■□□□□ 0.66
PDCD6-214ENST00000628729 ALG1Q9BT22 464 aa19.2■□□□□ 0.66
PDCD6-214ENST00000628729 NOD1Q9Y239 953 aa19.2■□□□□ 0.66
PDCD6-214ENST00000628729 GCOM1H8Y6P7 765 aaPredicted RBP19.19■□□□□ 0.66
PDCD6-214ENST00000628729 GGPS1O95749 300 aa19.19■□□□□ 0.66
PDCD6-214ENST00000628729 CA3P07451 260 aa19.19■□□□□ 0.66
PDCD6-214ENST00000628729 POLR2MP0CAP2 368 aa19.19■□□□□ 0.66
PDCD6-214ENST00000628729 MRPS9P82933 396 aaKnown RBP19.19■□□□□ 0.66
PDCD6-214ENST00000628729 ZNF200P98182 395 aaPredicted RBP19.19■□□□□ 0.66
PDCD6-214ENST00000628729 SEMA3FQ13275 785 aa19.19■□□□□ 0.66
PDCD6-214ENST00000628729 BFSP2Q13515 415 aa19.19■□□□□ 0.66
PDCD6-214ENST00000628729 LAMC2Q13753 1193 aa19.19■□□□□ 0.66
PDCD6-214ENST00000628729 KIAA0753Q2KHM9 967 aa19.19■□□□□ 0.66
PDCD6-214ENST00000628729 TRIM71Q2Q1W2 868 aaKnown RBP19.19■□□□□ 0.66
PDCD6-214ENST00000628729 CELF3Q5SZQ8 465 aaKnown RBP19.19■□□□□ 0.66
PDCD6-214ENST00000628729 TRAF7Q6Q0C0 670 aa19.19■□□□□ 0.66
PDCD6-214ENST00000628729 SPRED2Q7Z698 418 aa19.19■□□□□ 0.66
PDCD6-214ENST00000628729 DHX37Q8IY37 1157 aaKnown RBP19.19■□□□□ 0.66
PDCD6-214ENST00000628729 AFAP1L1Q8TED9 768 aa19.19■□□□□ 0.66
PDCD6-214ENST00000628729 PPM1EQ8WY54 764 aa19.19■□□□□ 0.66
PDCD6-214ENST00000628729 RNF39Q9H2S5 420 aa19.19■□□□□ 0.66
PDCD6-214ENST00000628729 EPOPA6NHQ4 379 aa19.18■□□□□ 0.66
PDCD6-214ENST00000628729 NBNO60934 754 aa19.18■□□□□ 0.66
PDCD6-214ENST00000628729 PLEKHA8P1O95397 391 aa19.18■□□□□ 0.66
PDCD6-214ENST00000628729 CCND2P30279 289 aa19.18■□□□□ 0.66
PDCD6-214ENST00000628729 SART3Q15020 963 aaKnown RBP19.18■□□□□ 0.66
PDCD6-214ENST00000628729 LRRC8DQ7L1W4 858 aa19.18■□□□□ 0.66
PDCD6-214ENST00000628729 CATIPQ7Z7H3 387 aa19.18■□□□□ 0.66
PDCD6-214ENST00000628729 SAMD3Q8N6K7 520 aa19.18■□□□□ 0.66
PDCD6-214ENST00000628729 RETREG2Q8NC44 543 aa19.18■□□□□ 0.66
PDCD6-214ENST00000628729 CAGE1Q8TC20 777 aa19.18■□□□□ 0.66
PDCD6-214ENST00000628729 TELO2Q9Y4R8 837 aa19.18■□□□□ 0.66
PDCD6-214ENST00000628729 SH2B2O14492 632 aaPredicted RBP19.17■□□□□ 0.66
PDCD6-214ENST00000628729 PRC1O43663 620 aa19.17■□□□□ 0.66
PDCD6-214ENST00000628729 DDAH1O94760 285 aa19.17■□□□□ 0.66
PDCD6-214ENST00000628729 CKBP12277 381 aa19.17■□□□□ 0.66
PDCD6-214ENST00000628729 SELPP16109 830 aa19.17■□□□□ 0.66
PDCD6-214ENST00000628729 MBTPS1Q14703 1052 aa19.17■□□□□ 0.66
PDCD6-214ENST00000628729 TMCO2Q7Z6W1 182 aaPredicted RBP19.17■□□□□ 0.66
PDCD6-214ENST00000628729 SPATA33Q96N06 139 aa19.17■□□□□ 0.66
PDCD6-214ENST00000628729 SLC9A7Q96T83 725 aa19.17■□□□□ 0.66
PDCD6-214ENST00000628729 ESYT1Q9BSJ8 1104 aa19.17■□□□□ 0.66
PDCD6-214ENST00000628729 C16orf70Q9BSU1 422 aa19.17■□□□□ 0.66
PDCD6-214ENST00000628729 SPZ1Q9BXG8 430 aa19.17■□□□□ 0.66
PDCD6-214ENST00000628729 FTOQ9C0B1 505 aaKnown RBP eCLIP19.17■□□□□ 0.66
PDCD6-214ENST00000628729 RFXAPO00287 272 aa19.16■□□□□ 0.66
PDCD6-214ENST00000628729 SLC27A2O14975 620 aa19.16■□□□□ 0.66
PDCD6-214ENST00000628729 RXRAP19793 462 aa19.16■□□□□ 0.66
PDCD6-214ENST00000628729 IGFBP4P22692 258 aa19.16■□□□□ 0.66
PDCD6-214ENST00000628729 WDR5P61964 334 aaKnown RBP19.16■□□□□ 0.66
PDCD6-214ENST00000628729 CCDC85BQ15834 202 aaPredicted RBP19.16■□□□□ 0.66
PDCD6-214ENST00000628729 HERC6Q8IVU3 1022 aa19.16■□□□□ 0.66
PDCD6-214ENST00000628729 CMTR1Q8N1G2 835 aaKnown RBP19.16■□□□□ 0.66
PDCD6-214ENST00000628729 C7orf31Q8N865 590 aa19.16■□□□□ 0.66
PDCD6-214ENST00000628729 INPP4AQ96PE3 977 aaPredicted RBP19.16■□□□□ 0.66
PDCD6-214ENST00000628729 MAP3K14Q99558 947 aa19.16■□□□□ 0.66
PDCD6-214ENST00000628729 KATNAL1Q9BW62 490 aa19.16■□□□□ 0.66
PDCD6-214ENST00000628729 MEIS2O14770 477 aa19.15■□□□□ 0.66
PDCD6-214ENST00000628729 CXCL10P02778 98 aa19.15■□□□□ 0.66
PDCD6-214ENST00000628729 ACTN1P12814 892 aa19.15■□□□□ 0.66
PDCD6-214ENST00000628729 HOXC8P31273 242 aa19.15■□□□□ 0.66
PDCD6-214ENST00000628729 DEFB103AP81534 67 aa19.15■□□□□ 0.66
PDCD6-214ENST00000628729 USP17L6PQ6QN14 398 aa19.15■□□□□ 0.66
PDCD6-214ENST00000628729 RAB11FIP4Q86YS3 637 aa19.15■□□□□ 0.66
PDCD6-214ENST00000628729 SRBD1Q8N5C6 995 aaKnown RBP19.15■□□□□ 0.66
PDCD6-214ENST00000628729 CCDC155Q8N6L0 562 aa19.15■□□□□ 0.66
PDCD6-214ENST00000628729 CERS4Q9HA82 394 aa19.15■□□□□ 0.66
PDCD6-214ENST00000628729 SIP14410 1827 aa19.14■□□□□ 0.65
PDCD6-214ENST00000628729 LCHNA4D1U4 455 aa19.14■□□□□ 0.65
PDCD6-214ENST00000628729 PPFIA4O75335 1185 aa19.14■□□□□ 0.65
PDCD6-214ENST00000628729 BAIAP3O94812 1187 aa19.14■□□□□ 0.65
PDCD6-214ENST00000628729 TGFB3P10600 412 aa19.14■□□□□ 0.65
PDCD6-214ENST00000628729 TAP1Q03518 808 aa19.14■□□□□ 0.65
PDCD6-214ENST00000628729 PTK7Q13308 1070 aa19.14■□□□□ 0.65
PDCD6-214ENST00000628729 NECTIN1Q15223 517 aa19.14■□□□□ 0.65
PDCD6-214ENST00000628729 ZNF618Q5T7W0 954 aa19.14■□□□□ 0.65
PDCD6-214ENST00000628729 CREB3L3Q68CJ9 461 aa19.14■□□□□ 0.65
PDCD6-214ENST00000628729 KCNV1Q6PIU1 500 aa19.14■□□□□ 0.65
PDCD6-214ENST00000628729 LRRC2Q9BYS8 371 aa19.14■□□□□ 0.65
PDCD6-214ENST00000628729 MICAL3Q7RTP6 2002 aa19.13■□□□□ 0.65
PDCD6-214ENST00000628729 LGALS2P05162 132 aa19.13■□□□□ 0.65
PDCD6-214ENST00000628729 ICAM3P32942 547 aa19.13■□□□□ 0.65
PDCD6-214ENST00000628729 TRAF1Q13077 416 aa19.13■□□□□ 0.65
PDCD6-214ENST00000628729 TJAP1Q5JTD0 557 aa19.13■□□□□ 0.65
PDCD6-214ENST00000628729 KRT40Q6A162 431 aa19.13■□□□□ 0.65
PDCD6-214ENST00000628729 CASC1Q6TDU7 716 aa19.13■□□□□ 0.65
PDCD6-214ENST00000628729 TRIM50Q86XT4 487 aa19.13■□□□□ 0.65
PDCD6-214ENST00000628729 CTCFLQ8NI51 663 aaPredicted RBP19.13■□□□□ 0.65
PDCD6-214ENST00000628729 PHOSPHO2Q8TCD6 241 aa19.13■□□□□ 0.65
PDCD6-214ENST00000628729 MTA3Q9BTC8 594 aa19.13■□□□□ 0.65
PDCD6-214ENST00000628729 PRRC2BQ5JSZ5 2229 aaKnown RBP19.13■□□□□ 0.65
PDCD6-214ENST00000628729 hCG_1642624A0A1W2PR95 340 aa19.12■□□□□ 0.65
PDCD6-214ENST00000628729 SPATA31C2B4DYI2 1134 aa19.12■□□□□ 0.65
PDCD6-214ENST00000628729 PIK3CDO00329 1044 aa19.12■□□□□ 0.65
PDCD6-214ENST00000628729 MCM5P33992 734 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms