RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 RETREG2Q8NC44 543 aa20.86■□□□□ 0.93
H3F3B-209ENST00000589949 ESYT1Q9BSJ8 1104 aa20.86■□□□□ 0.93
H3F3B-209ENST00000589949 SLC28A3Q9HAS3 691 aa20.86■□□□□ 0.93
H3F3B-209ENST00000589949 NOD1Q9Y239 953 aa20.86■□□□□ 0.93
H3F3B-209ENST00000589949 TELO2Q9Y4R8 837 aa20.86■□□□□ 0.93
H3F3B-209ENST00000589949 PCDHA11Q9Y5I1 949 aa20.86■□□□□ 0.93
H3F3B-209ENST00000589949 FRMPD4Q14CM0 1322 aa20.85■□□□□ 0.93
H3F3B-209ENST00000589949 SLC27A2O14975 620 aa20.85■□□□□ 0.93
H3F3B-209ENST00000589949 PRC1O43663 620 aa20.85■□□□□ 0.93
H3F3B-209ENST00000589949 PLEKHA8P1O95397 391 aa20.85■□□□□ 0.93
H3F3B-209ENST00000589949 SEMA3FQ13275 785 aa20.85■□□□□ 0.93
H3F3B-209ENST00000589949 KIAA0753Q2KHM9 967 aa20.85■□□□□ 0.93
H3F3B-209ENST00000589949 TRIM71Q2Q1W2 868 aaKnown RBP20.85■□□□□ 0.93
H3F3B-209ENST00000589949 TRAF7Q6Q0C0 670 aa20.85■□□□□ 0.93
H3F3B-209ENST00000589949 PPM1EQ8WY54 764 aa20.85■□□□□ 0.93
H3F3B-209ENST00000589949 SPATA33Q96N06 139 aa20.85■□□□□ 0.93
H3F3B-209ENST00000589949 SH2B2O14492 632 aaPredicted RBP20.84■□□□□ 0.93
H3F3B-209ENST00000589949 RXRAP19793 462 aa20.84■□□□□ 0.93
H3F3B-209ENST00000589949 CCND2P30279 289 aa20.84■□□□□ 0.93
H3F3B-209ENST00000589949 RBL2Q08999 1139 aa20.84■□□□□ 0.93
H3F3B-209ENST00000589949 NECTIN1Q15223 517 aa20.84■□□□□ 0.93
H3F3B-209ENST00000589949 CMTR1Q8N1G2 835 aaKnown RBP20.84■□□□□ 0.93
H3F3B-209ENST00000589949 SRBD1Q8N5C6 995 aaKnown RBP20.84■□□□□ 0.93
H3F3B-209ENST00000589949 GAS2L1Q99501 681 aaPredicted RBP20.84■□□□□ 0.93
H3F3B-209ENST00000589949 C16orf70Q9BSU1 422 aa20.84■□□□□ 0.93
H3F3B-209ENST00000589949 SPZ1Q9BXG8 430 aa20.84■□□□□ 0.93
H3F3B-209ENST00000589949 FTOQ9C0B1 505 aaKnown RBP eCLIP20.84■□□□□ 0.93
H3F3B-209ENST00000589949 TRANK1O15050 2925 aa20.84■□□□□ 0.93
H3F3B-209ENST00000589949 NBNO60934 754 aa20.83■□□□□ 0.93
H3F3B-209ENST00000589949 DDAH1O94760 285 aa20.83■□□□□ 0.93
H3F3B-209ENST00000589949 CA3P07451 260 aa20.83■□□□□ 0.93
H3F3B-209ENST00000589949 CKBP12277 381 aa20.83■□□□□ 0.93
H3F3B-209ENST00000589949 PPP2R2DQ66LE6 453 aa20.83■□□□□ 0.93
H3F3B-209ENST00000589949 USP17L6PQ6QN14 398 aa20.83■□□□□ 0.93
H3F3B-209ENST00000589949 TMCO2Q7Z6W1 182 aaPredicted RBP20.83■□□□□ 0.93
H3F3B-209ENST00000589949 RAB11FIP4Q86YS3 637 aa20.83■□□□□ 0.93
H3F3B-209ENST00000589949 C7orf31Q8N865 590 aa20.83■□□□□ 0.93
H3F3B-209ENST00000589949 CAGE1Q8TC20 777 aa20.83■□□□□ 0.93
H3F3B-209ENST00000589949 AFAP1L1Q8TED9 768 aa20.83■□□□□ 0.93
H3F3B-209ENST00000589949 MAP3K14Q99558 947 aa20.83■□□□□ 0.93
H3F3B-209ENST00000589949 LRRC2Q9BYS8 371 aa20.83■□□□□ 0.93
H3F3B-209ENST00000589949 EPOPA6NHQ4 379 aa20.82■□□□□ 0.92
H3F3B-209ENST00000589949 RFXAPO00287 272 aa20.82■□□□□ 0.92
H3F3B-209ENST00000589949 MEIS2O14770 477 aa20.82■□□□□ 0.92
H3F3B-209ENST00000589949 PPFIA4O75335 1185 aa20.82■□□□□ 0.92
H3F3B-209ENST00000589949 TGFB3P10600 412 aa20.82■□□□□ 0.92
H3F3B-209ENST00000589949 SELPP16109 830 aa20.82■□□□□ 0.92
H3F3B-209ENST00000589949 TRAF1Q13077 416 aa20.82■□□□□ 0.92
H3F3B-209ENST00000589949 MBTPS1Q14703 1052 aa20.82■□□□□ 0.92
H3F3B-209ENST00000589949 CCDC85BQ15834 202 aaPredicted RBP20.82■□□□□ 0.92
H3F3B-209ENST00000589949 CREB3L3Q68CJ9 461 aa20.82■□□□□ 0.92
H3F3B-209ENST00000589949 KCNV1Q6PIU1 500 aa20.82■□□□□ 0.92
H3F3B-209ENST00000589949 LRRC8DQ7L1W4 858 aa20.82■□□□□ 0.92
H3F3B-209ENST00000589949 SPRED2Q7Z698 418 aa20.82■□□□□ 0.92
H3F3B-209ENST00000589949 INPP4AQ96PE3 977 aaPredicted RBP20.82■□□□□ 0.92
H3F3B-209ENST00000589949 RTEL1Q9NZ71 1219 aa20.82■□□□□ 0.92
H3F3B-209ENST00000589949 PTPRSQ13332 1948 aa20.82■□□□□ 0.92
H3F3B-209ENST00000589949 hCG_1642624A0A1W2PR95 340 aa20.81■□□□□ 0.92
H3F3B-209ENST00000589949 SPATA31C2B4DYI2 1134 aa20.81■□□□□ 0.92
H3F3B-209ENST00000589949 ACTN1P12814 892 aa20.81■□□□□ 0.92
H3F3B-209ENST00000589949 IGFBP4P22692 258 aa20.81■□□□□ 0.92
H3F3B-209ENST00000589949 MCM5P33992 734 aa20.81■□□□□ 0.92
H3F3B-209ENST00000589949 HERC6Q8IVU3 1022 aa20.81■□□□□ 0.92
H3F3B-209ENST00000589949 ICAM3P32942 547 aa20.8■□□□□ 0.92
H3F3B-209ENST00000589949 PTK7Q13308 1070 aa20.8■□□□□ 0.92
H3F3B-209ENST00000589949 ZNF618Q5T7W0 954 aa20.8■□□□□ 0.92
H3F3B-209ENST00000589949 CASC1Q6TDU7 716 aa20.8■□□□□ 0.92
H3F3B-209ENST00000589949 CTCFLQ8NI51 663 aaPredicted RBP20.8■□□□□ 0.92
H3F3B-209ENST00000589949 PHOSPHO2Q8TCD6 241 aa20.8■□□□□ 0.92
H3F3B-209ENST00000589949 RRP36Q96EU6 259 aaKnown RBP20.8■□□□□ 0.92
H3F3B-209ENST00000589949 SLC9A7Q96T83 725 aa20.8■□□□□ 0.92
H3F3B-209ENST00000589949 MTA3Q9BTC8 594 aa20.8■□□□□ 0.92
H3F3B-209ENST00000589949 KATNAL1Q9BW62 490 aa20.8■□□□□ 0.92
H3F3B-209ENST00000589949 CERS4Q9HA82 394 aa20.8■□□□□ 0.92
H3F3B-209ENST00000589949 CXCL10P02778 98 aa20.79■□□□□ 0.92
H3F3B-209ENST00000589949 SMARCA1P28370 1054 aa20.79■□□□□ 0.92
H3F3B-209ENST00000589949 KIF5BP33176 963 aa20.79■□□□□ 0.92
H3F3B-209ENST00000589949 WDR5P61964 334 aaKnown RBP20.79■□□□□ 0.92
H3F3B-209ENST00000589949 DEFB103AP81534 67 aa20.79■□□□□ 0.92
H3F3B-209ENST00000589949 TAP1Q03518 808 aa20.79■□□□□ 0.92
H3F3B-209ENST00000589949 NFXL1Q6ZNB6 911 aa20.79■□□□□ 0.92
H3F3B-209ENST00000589949 CCDC155Q8N6L0 562 aa20.79■□□□□ 0.92
H3F3B-209ENST00000589949 TMEM87BQ96K49 555 aa20.79■□□□□ 0.92
H3F3B-209ENST00000589949 MLXIPQ9HAP2 919 aa20.79■□□□□ 0.92
H3F3B-209ENST00000589949 ANO2Q9NQ90 1003 aa20.79■□□□□ 0.92
H3F3B-209ENST00000589949 DOCK5Q9H7D0 1870 aa20.79■□□□□ 0.92
H3F3B-209ENST00000589949 LCHNA4D1U4 455 aa20.78■□□□□ 0.92
H3F3B-209ENST00000589949 PIK3CDO00329 1044 aa20.78■□□□□ 0.92
H3F3B-209ENST00000589949 LGALS2P05162 132 aa20.78■□□□□ 0.92
H3F3B-209ENST00000589949 HOXC8P31273 242 aa20.78■□□□□ 0.92
H3F3B-209ENST00000589949 LIFRP42702 1097 aa20.78■□□□□ 0.92
H3F3B-209ENST00000589949 CYFIP1Q7L576 1253 aa20.78■□□□□ 0.92
H3F3B-209ENST00000589949 OSBPL7Q9BZF2 842 aa20.78■□□□□ 0.92
H3F3B-209ENST00000589949 CCDC69A6NI79 296 aa20.77■□□□□ 0.92
H3F3B-209ENST00000589949 H3BRB1 525 aa20.77■□□□□ 0.92
H3F3B-209ENST00000589949 BAIAP3O94812 1187 aa20.77■□□□□ 0.92
H3F3B-209ENST00000589949 BMP2KLQ5H9B9 411 aa20.77■□□□□ 0.92
H3F3B-209ENST00000589949 PCNX4Q63HM2 1172 aa20.77■□□□□ 0.92
H3F3B-209ENST00000589949 KRT40Q6A162 431 aa20.77■□□□□ 0.92
H3F3B-209ENST00000589949 SERINC5Q86VE9 423 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms