RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 C7orf31Q8N865 590 aa17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 PPTC7Q8NI37 304 aa17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 EMID1Q96A84 441 aaPredicted RBP17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 SLC9A7Q96T83 725 aa17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 MYL10Q9BUA6 226 aa17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 MAF1Q9H063 256 aa17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 RIOX1Q9H6W3 641 aa17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 MICAL3Q7RTP6 2002 aa17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 LCHNA4D1U4 455 aa17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 SGSM2O43147 1006 aa17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 NBNO60934 754 aa17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 CKBP12277 381 aa17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 DEFB103AP81534 67 aa17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 TAP1Q03518 808 aa17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 TROAPQ12815 778 aa17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 LAMC2Q13753 1193 aa17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 MYSM1Q5VVJ2 828 aa17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 CAGE1Q8TC20 777 aa17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 AFAP1L1Q8TED9 768 aa17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 ARNTL2Q8WYA1 636 aa17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 SYMPKQ92797 1274 aaKnown RBP17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 SPATA33Q96N06 139 aa17.62■□□□□ 0.41
PRKCSH-204ENST00000587290 GCOM1H8Y6P7 765 aaPredicted RBP17.61■□□□□ 0.41
PRKCSH-204ENST00000587290 HAS3O00219 553 aa17.61■□□□□ 0.41
PRKCSH-204ENST00000587290 POLR2MP0CAP2 368 aa17.61■□□□□ 0.41
PRKCSH-204ENST00000587290 SELPP16109 830 aa17.61■□□□□ 0.41
PRKCSH-204ENST00000587290 WDR5P61964 334 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-204ENST00000587290 TFF2Q03403 129 aa17.61■□□□□ 0.41
PRKCSH-204ENST00000587290 CELF3Q5SZQ8 465 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-204ENST00000587290 VSIG10LQ86VR7 867 aa17.61■□□□□ 0.41
PRKCSH-204ENST00000587290 MB21D2Q8IYB1 491 aaPredicted RBP17.61■□□□□ 0.41
PRKCSH-204ENST00000587290 CCDC155Q8N6L0 562 aa17.61■□□□□ 0.41
PRKCSH-204ENST00000587290 NCOA7Q8NI08 942 aa17.61■□□□□ 0.41
PRKCSH-204ENST00000587290 RUFY2Q8WXA3 655 aa17.61■□□□□ 0.41
PRKCSH-204ENST00000587290 ASB2Q96Q27 587 aa17.61■□□□□ 0.41
PRKCSH-204ENST00000587290 TELO2Q9Y4R8 837 aa17.61■□□□□ 0.41
PRKCSH-204ENST00000587290 BRWD1Q9NSI6 2320 aa17.6■□□□□ 0.41
PRKCSH-204ENST00000587290 ERICH2A1L162 156 aa17.6■□□□□ 0.41
PRKCSH-204ENST00000587290 CCND2P30279 289 aa17.6■□□□□ 0.41
PRKCSH-204ENST00000587290 MBTPS1Q14703 1052 aa17.6■□□□□ 0.41
PRKCSH-204ENST00000587290 TRIM71Q2Q1W2 868 aaKnown RBP17.6■□□□□ 0.41
PRKCSH-204ENST00000587290 TRAF7Q6Q0C0 670 aa17.6■□□□□ 0.41
PRKCSH-204ENST00000587290 RBM8AQ9Y5S9 174 aaKnown RBP17.6■□□□□ 0.41
PRKCSH-204ENST00000587290 SIP14410 1827 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 PNMA6FA0A0J9YX94 578 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 TLL1O43897 1013 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 HOXD8P13378 290 aaPredicted RBP17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 KCNJ6P48051 423 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 MRPS9P82933 396 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 SKIV2LQ15477 1246 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 ZNF618Q5T7W0 954 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 FAM117BQ6P1L5 589 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 CATIPQ7Z7H3 387 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 RAB11FIP4Q86YS3 637 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 IGDCC4Q8TDY8 1250 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 ADAMTS19Q8TE59 1207 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 ATXN2LQ8WWM7 1075 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 NECAB3Q96P71 396 aaPredicted RBP17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 C16orf70Q9BSU1 422 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 KATNAL1Q9BW62 490 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 RTEL1Q9NZ71 1219 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 MTCH2Q9Y6C9 303 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 KAT6AQ92794 2004 aa17.59■□□□□ 0.41
PRKCSH-204ENST00000587290 BAIAP3O94812 1187 aa17.58■□□□□ 0.4
PRKCSH-204ENST00000587290 RXRAP19793 462 aa17.58■□□□□ 0.4
PRKCSH-204ENST00000587290 RBL2Q08999 1139 aa17.58■□□□□ 0.4
PRKCSH-204ENST00000587290 SEMA3FQ13275 785 aa17.58■□□□□ 0.4
PRKCSH-204ENST00000587290 CNKSR3Q6P9H4 555 aa17.58■□□□□ 0.4
PRKCSH-204ENST00000587290 SKAP1Q86WV1 359 aa17.58■□□□□ 0.4
PRKCSH-204ENST00000587290 TRIM50Q86XT4 487 aa17.58■□□□□ 0.4
PRKCSH-204ENST00000587290 CMTR1Q8N1G2 835 aaKnown RBP17.58■□□□□ 0.4
PRKCSH-204ENST00000587290 PHOSPHO2Q8TCD6 241 aa17.58■□□□□ 0.4
PRKCSH-204ENST00000587290 LY9Q9HBG7 655 aa17.58■□□□□ 0.4
PRKCSH-204ENST00000587290 MTUS1Q9ULD2 1270 aa17.58■□□□□ 0.4
PRKCSH-204ENST00000587290 PLEKHA8P1O95397 391 aa17.57■□□□□ 0.4
PRKCSH-204ENST00000587290 CXCL10P02778 98 aa17.57■□□□□ 0.4
PRKCSH-204ENST00000587290 MRPS5P82675 430 aaKnown RBP17.57■□□□□ 0.4
PRKCSH-204ENST00000587290 SP4Q02446 784 aa17.57■□□□□ 0.4
PRKCSH-204ENST00000587290 PTK7Q13308 1070 aa17.57■□□□□ 0.4
PRKCSH-204ENST00000587290 SART3Q15020 963 aaKnown RBP17.57■□□□□ 0.4
PRKCSH-204ENST00000587290 USP17L6PQ6QN14 398 aa17.57■□□□□ 0.4
PRKCSH-204ENST00000587290 ZNF654Q8IZM8 581 aa17.57■□□□□ 0.4
PRKCSH-204ENST00000587290 GDPD5Q8WTR4 605 aa17.57■□□□□ 0.4
PRKCSH-204ENST00000587290 MAP4K1Q92918 833 aa17.57■□□□□ 0.4
PRKCSH-204ENST00000587290 OSBPL7Q9BZF2 842 aa17.57■□□□□ 0.4
PRKCSH-204ENST00000587290 MLXIPQ9HAP2 919 aa17.57■□□□□ 0.4
PRKCSH-204ENST00000587290 MAP3K20Q9NYL2 800 aaKnown RBP17.57■□□□□ 0.4
PRKCSH-204ENST00000587290 FRMPD4Q14CM0 1322 aa17.56■□□□□ 0.4
PRKCSH-204ENST00000587290 hCG_1642624A0A1W2PR95 340 aa17.56■□□□□ 0.4
PRKCSH-204ENST00000587290 KIF28PB7ZC32 967 aa17.56■□□□□ 0.4
PRKCSH-204ENST00000587290 TNFRSF10AO00220 468 aa17.56■□□□□ 0.4
PRKCSH-204ENST00000587290 PPFIA4O75335 1185 aa17.56■□□□□ 0.4
PRKCSH-204ENST00000587290 LGALS2P05162 132 aa17.56■□□□□ 0.4
PRKCSH-204ENST00000587290 KCNQ1P51787 676 aa17.56■□□□□ 0.4
PRKCSH-204ENST00000587290 GRB10Q13322 594 aa17.56■□□□□ 0.4
PRKCSH-204ENST00000587290 ZBED2Q9BTP6 218 aa17.56■□□□□ 0.4
PRKCSH-204ENST00000587290 PRC1O43663 620 aa17.55■□□□□ 0.4
PRKCSH-204ENST00000587290 LPXNO60711 386 aa17.55■□□□□ 0.4
PRKCSH-204ENST00000587290 CTSHP09668 335 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms