RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 TMEM87BQ96K49 555 aa15.47■□□□□ 0.07
PRKCSH-201ENST00000585325 ALG1Q9BT22 464 aa15.47■□□□□ 0.07
PRKCSH-201ENST00000585325 MTA3Q9BTC8 594 aa15.47■□□□□ 0.07
PRKCSH-201ENST00000585325 KATNAL1Q9BW62 490 aa15.47■□□□□ 0.07
PRKCSH-201ENST00000585325 SPZ1Q9BXG8 430 aa15.47■□□□□ 0.07
PRKCSH-201ENST00000585325 NKX2-4Q9H2Z4 354 aa15.47■□□□□ 0.07
PRKCSH-201ENST00000585325 SEC63Q9UGP8 760 aaKnown RBP15.47■□□□□ 0.07
PRKCSH-201ENST00000585325 GGPS1O95749 300 aa15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 ACTN1P12814 892 aa15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 IGFBP4P22692 258 aa15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 PSEN2P49810 448 aa15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 RABGGTBP53611 331 aa15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 CREB3L3Q68CJ9 461 aa15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 CENPQQ7L2Z9 268 aaPredicted RBP15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 SESTD1Q86VW0 696 aa15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 TMTC2Q8N394 836 aa15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 C7orf31Q8N865 590 aa15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 SPATA33Q96N06 139 aa15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 NECAB3Q96P71 396 aaPredicted RBP15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 C1QTNF1Q9BXJ1 281 aa15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 FTOQ9C0B1 505 aaKnown RBP eCLIP15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 SLC28A3Q9HAS3 691 aa15.46■□□□□ 0.07
PRKCSH-201ENST00000585325 PLEKHA8P1O95397 391 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 F2P00734 622 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 ATP2A2P16615 1042 aaKnown RBP15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 RXRAP19793 462 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 UBA1P22314 1058 aaKnown RBP15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 GNAQP50148 359 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 MFSD10Q14728 455 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 NECTIN1Q15223 517 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 KIAA0753Q2KHM9 967 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 HSDL1Q3SXM5 330 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 BMP2KLQ5H9B9 411 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 CELF3Q5SZQ8 465 aaKnown RBP15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 MYSM1Q5VVJ2 828 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 RAB11FIP4Q86YS3 637 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 SMARCC2Q8TAQ2 1214 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 CAGE1Q8TC20 777 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 GPKOWQ92917 476 aaPredicted RBP eCLIP15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 CUL5Q93034 780 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 LZTS2Q9BRK4 669 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 MLXIPQ9HAP2 919 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 HDAC6Q9UBN7 1215 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 GTF2IRD1Q9UHL9 959 aa15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 YBX2Q9Y2T7 364 aaKnown RBP15.45■□□□□ 0.06
PRKCSH-201ENST00000585325 CALM1P0DP23 149 aa15.44■□□□□ 0.06
PRKCSH-201ENST00000585325 CALM2P0DP24 149 aa15.44■□□□□ 0.06
PRKCSH-201ENST00000585325 CALM3P0DP25 149 aa15.44■□□□□ 0.06
PRKCSH-201ENST00000585325 TGFB3P10600 412 aa15.44■□□□□ 0.06
PRKCSH-201ENST00000585325 SMARCA1P28370 1054 aa15.44■□□□□ 0.06
PRKCSH-201ENST00000585325 LIFRP42702 1097 aa15.44■□□□□ 0.06
PRKCSH-201ENST00000585325 SP2Q02086 613 aa15.44■□□□□ 0.06
PRKCSH-201ENST00000585325 COL9A3Q14050 684 aaPredicted RBP15.44■□□□□ 0.06
PRKCSH-201ENST00000585325 GNPTABQ3T906 1256 aa15.44■□□□□ 0.06
PRKCSH-201ENST00000585325 CMTR1Q8N1G2 835 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-201ENST00000585325 SRBD1Q8N5C6 995 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-201ENST00000585325 AFAP1L1Q8TED9 768 aa15.44■□□□□ 0.06
PRKCSH-201ENST00000585325 LRRC2Q9BYS8 371 aa15.44■□□□□ 0.06
PRKCSH-201ENST00000585325 SLC12A7Q9Y666 1083 aa15.44■□□□□ 0.06
PRKCSH-201ENST00000585325 FRMPD4Q14CM0 1322 aa15.43■□□□□ 0.06
PRKCSH-201ENST00000585325 HAS3O00219 553 aa15.43■□□□□ 0.06
PRKCSH-201ENST00000585325 PPFIA4O75335 1185 aa15.43■□□□□ 0.06
PRKCSH-201ENST00000585325 MYOGP15173 224 aa15.43■□□□□ 0.06
PRKCSH-201ENST00000585325 MRPS9P82933 396 aaKnown RBP15.43■□□□□ 0.06
PRKCSH-201ENST00000585325 RNF20Q5VTR2 975 aa15.43■□□□□ 0.06
PRKCSH-201ENST00000585325 PPP2R2DQ66LE6 453 aa15.43■□□□□ 0.06
PRKCSH-201ENST00000585325 USP17L6PQ6QN14 398 aa15.43■□□□□ 0.06
PRKCSH-201ENST00000585325 LRRC8DQ7L1W4 858 aa15.43■□□□□ 0.06
PRKCSH-201ENST00000585325 DHX38Q92620 1227 aaKnown RBP15.43■□□□□ 0.06
PRKCSH-201ENST00000585325 CTAGE1Q96RT6 745 aa15.43■□□□□ 0.06
PRKCSH-201ENST00000585325 RTEL1Q9NZ71 1219 aa15.43■□□□□ 0.06
PRKCSH-201ENST00000585325 PCDHA11Q9Y5I1 949 aa15.43■□□□□ 0.06
PRKCSH-201ENST00000585325 TRIP12Q14669 1992 aaPredicted RBP15.43■□□□□ 0.06
PRKCSH-201ENST00000585325 NOP56O00567 594 aaKnown RBP15.42■□□□□ 0.06
PRKCSH-201ENST00000585325 STAM2O75886 525 aa15.42■□□□□ 0.06
PRKCSH-201ENST00000585325 HOXD8P13378 290 aaPredicted RBP15.42■□□□□ 0.06
PRKCSH-201ENST00000585325 SELPP16109 830 aa15.42■□□□□ 0.06
PRKCSH-201ENST00000585325 MICU3Q86XE3 530 aa15.42■□□□□ 0.06
PRKCSH-201ENST00000585325 CCDC82Q8N4S0 544 aa15.42■□□□□ 0.06
PRKCSH-201ENST00000585325 SLC9A7Q96T83 725 aa15.42■□□□□ 0.06
PRKCSH-201ENST00000585325 MYO9BQ13459 2157 aa15.41■□□□□ 0.06
PRKCSH-201ENST00000585325 hCG_1642624A0A1W2PR95 340 aa15.41■□□□□ 0.06
PRKCSH-201ENST00000585325 MEIS2O14770 477 aa15.41■□□□□ 0.06
PRKCSH-201ENST00000585325 FIBPO43427 364 aa15.41■□□□□ 0.06
PRKCSH-201ENST00000585325 CKBP12277 381 aa15.41■□□□□ 0.06
PRKCSH-201ENST00000585325 BMP1P13497 986 aa15.41■□□□□ 0.06
PRKCSH-201ENST00000585325 ICAM3P32942 547 aa15.41■□□□□ 0.06
PRKCSH-201ENST00000585325 ZNF200P98182 395 aaPredicted RBP15.41■□□□□ 0.06
PRKCSH-201ENST00000585325 PTK7Q13308 1070 aa15.41■□□□□ 0.06
PRKCSH-201ENST00000585325 NEDD9Q14511 834 aa15.41■□□□□ 0.06
PRKCSH-201ENST00000585325 SYNE3Q6ZMZ3 975 aa15.41■□□□□ 0.06
PRKCSH-201ENST00000585325 INPP4AQ96PE3 977 aaPredicted RBP15.41■□□□□ 0.06
PRKCSH-201ENST00000585325 BCAS3Q9H6U6 928 aa15.41■□□□□ 0.06
PRKCSH-201ENST00000585325 NCOR1O75376 2440 aa15.41■□□□□ 0.06
PRKCSH-201ENST00000585325 DOCK5Q9H7D0 1870 aa15.4■□□□□ 0.06
PRKCSH-201ENST00000585325 SPATA31C2B4DYI2 1134 aa15.4■□□□□ 0.06
PRKCSH-201ENST00000585325 PIK3CDO00329 1044 aa15.4■□□□□ 0.06
PRKCSH-201ENST00000585325 CDC45O75419 566 aa15.4■□□□□ 0.06
PRKCSH-201ENST00000585325 BAIAP3O94812 1187 aa15.4■□□□□ 0.06
PRKCSH-201ENST00000585325 PARNO95453 639 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms