RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 XPNPEP3Q9NQH7 507 aa17.64■□□□□ 0.41
SS18-216ENST00000580751 ZDHHC9Q9Y397 364 aa17.64■□□□□ 0.41
SS18-216ENST00000580751 Q9Y3F1 56 aa17.64■□□□□ 0.41
SS18-216ENST00000580751 MYH7BA7E2Y1 1941 aa17.64■□□□□ 0.41
SS18-216ENST00000580751 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.63■□□□□ 0.41
SS18-216ENST00000580751 VPS37CA5D8V6 355 aaPredicted RBP17.63■□□□□ 0.41
SS18-216ENST00000580751 MAFGO15525 162 aa17.63■□□□□ 0.41
SS18-216ENST00000580751 ADCY6O43306 1168 aa17.63■□□□□ 0.41
SS18-216ENST00000580751 F13A1P00488 732 aa17.63■□□□□ 0.41
SS18-216ENST00000580751 CIITAP33076 1130 aa17.63■□□□□ 0.41
SS18-216ENST00000580751 SETQ01105 290 aaPredicted RBP17.63■□□□□ 0.41
SS18-216ENST00000580751 INF2Q27J81 1249 aa17.63■□□□□ 0.41
SS18-216ENST00000580751 ANO1Q5XXA6 986 aa17.63■□□□□ 0.41
SS18-216ENST00000580751 ATL3Q6DD88 541 aa17.63■□□□□ 0.41
SS18-216ENST00000580751 CCDC62Q6P9F0 684 aa17.63■□□□□ 0.41
SS18-216ENST00000580751 NEK8Q86SG6 692 aa17.63■□□□□ 0.41
SS18-216ENST00000580751 LENG1Q96BZ8 264 aaPredicted RBP17.63■□□□□ 0.41
SS18-216ENST00000580751 ZFP91Q96JP5 570 aaPredicted RBP17.63■□□□□ 0.41
SS18-216ENST00000580751 GBP4Q96PP9 640 aa17.63■□□□□ 0.41
SS18-216ENST00000580751 NAP1L4Q99733 375 aaKnown RBP17.63■□□□□ 0.41
SS18-216ENST00000580751 OGDHLQ9ULD0 1010 aa17.63■□□□□ 0.41
SS18-216ENST00000580751 GNEQ9Y223 722 aaKnown RBP17.63■□□□□ 0.41
SS18-216ENST00000580751 SPATA31C2B4DYI2 1134 aa17.62■□□□□ 0.41
SS18-216ENST00000580751 ARIH2O95376 493 aa17.62■□□□□ 0.41
SS18-216ENST00000580751 PKP1Q13835 747 aa17.62■□□□□ 0.41
SS18-216ENST00000580751 MOXD1Q6UVY6 613 aa17.62■□□□□ 0.41
SS18-216ENST00000580751 BRAPQ7Z569 592 aa17.62■□□□□ 0.41
SS18-216ENST00000580751 TLK2Q86UE8 772 aa17.62■□□□□ 0.41
SS18-216ENST00000580751 NOSTRINQ8IVI9 506 aa17.62■□□□□ 0.41
SS18-216ENST00000580751 ARRDC4Q8NCT1 418 aa17.62■□□□□ 0.41
SS18-216ENST00000580751 TNPO1Q92973 898 aaKnown RBP17.62■□□□□ 0.41
SS18-216ENST00000580751 AP5M1Q9H0R1 490 aa17.62■□□□□ 0.41
SS18-216ENST00000580751 DDX41Q9UJV9 622 aaKnown RBP17.62■□□□□ 0.41
SS18-216ENST00000580751 SYNRGQ9UMZ2 1314 aa17.62■□□□□ 0.41
SS18-216ENST00000580751 FAM86B1E9PN63 330 aa17.61■□□□□ 0.41
SS18-216ENST00000580751 MEIS1O00470 390 aa17.61■□□□□ 0.41
SS18-216ENST00000580751 GH1P01241 217 aa17.61■□□□□ 0.41
SS18-216ENST00000580751 TFRCP02786 760 aaKnown RBP17.61■□□□□ 0.41
SS18-216ENST00000580751 FAM86B2P0C5J1 330 aa17.61■□□□□ 0.41
SS18-216ENST00000580751 GCFC2P16383 781 aaKnown RBP17.61■□□□□ 0.41
SS18-216ENST00000580751 UBA1P22314 1058 aaKnown RBP17.61■□□□□ 0.41
SS18-216ENST00000580751 GJA9P57773 515 aa17.61■□□□□ 0.41
SS18-216ENST00000580751 RNF180Q86T96 592 aa17.61■□□□□ 0.41
SS18-216ENST00000580751 ANKLE1Q8NAG6 615 aa17.61■□□□□ 0.41
SS18-216ENST00000580751 GIMAP8Q8ND71 665 aaPredicted RBP17.61■□□□□ 0.41
SS18-216ENST00000580751 SENP7Q9BQF6 1050 aa17.61■□□□□ 0.41
SS18-216ENST00000580751 UPF3AQ9H1J1 476 aaKnown RBP17.61■□□□□ 0.41
SS18-216ENST00000580751 KCNH7Q9NS40 1196 aa17.61■□□□□ 0.41
SS18-216ENST00000580751 IGLV3-22A0A075B6J6 115 aa17.6■□□□□ 0.41
SS18-216ENST00000580751 ADAMTS4O75173 837 aa17.6■□□□□ 0.41
SS18-216ENST00000580751 PGK1P00558 417 aa17.6■□□□□ 0.41
SS18-216ENST00000580751 U2AF2P26368 475 aaKnown RBP eCLIP17.6■□□□□ 0.411e-7■■■□□ 18.2
SS18-216ENST00000580751 SEMA3FQ13275 785 aa17.6■□□□□ 0.41
SS18-216ENST00000580751 NEDD9Q14511 834 aa17.6■□□□□ 0.41
SS18-216ENST00000580751 LY6KQ17RY6 165 aa17.6■□□□□ 0.41
SS18-216ENST00000580751 LETM2Q2VYF4 491 aa17.6■□□□□ 0.41
SS18-216ENST00000580751 PRR16Q569H4 304 aa17.6■□□□□ 0.41
SS18-216ENST00000580751 BRDTQ58F21 947 aaPredicted RBP17.6■□□□□ 0.41
SS18-216ENST00000580751 EARS2Q5JPH6 523 aaKnown RBP17.6■□□□□ 0.41
SS18-216ENST00000580751 MCTP1Q6DN14 999 aa17.6■□□□□ 0.41
SS18-216ENST00000580751 PLA2G4DQ86XP0 818 aa17.6■□□□□ 0.41
SS18-216ENST00000580751 OR6J1Q8NGC5 347 aa17.6■□□□□ 0.41
SS18-216ENST00000580751 CYP2W1Q8TAV3 490 aa17.6■□□□□ 0.41
SS18-216ENST00000580751 CYP3A7-CYP3A51PA0A087WV96 503 aa17.59■□□□□ 0.41
SS18-216ENST00000580751 POTEFA5A3E0 1075 aa17.59■□□□□ 0.41
SS18-216ENST00000580751 FAM205CA6NFA0 338 aa17.59■□□□□ 0.41
SS18-216ENST00000580751 DYNC1LI2O43237 492 aaPredicted RBP17.59■□□□□ 0.41
SS18-216ENST00000580751 GGPS1O95749 300 aa17.59■□□□□ 0.41
SS18-216ENST00000580751 C6orf222P0C671 652 aaPredicted RBP17.59■□□□□ 0.41
SS18-216ENST00000580751 CYP3A7P24462 503 aa17.59■□□□□ 0.41
SS18-216ENST00000580751 CST5P28325 142 aaPredicted RBP17.59■□□□□ 0.41
SS18-216ENST00000580751 CPT1AP50416 773 aa17.59■□□□□ 0.41
SS18-216ENST00000580751 NKX3-2P78367 333 aa17.59■□□□□ 0.41
SS18-216ENST00000580751 RESTQ13127 1097 aa17.59■□□□□ 0.41
SS18-216ENST00000580751 LAMC2Q13753 1193 aa17.59■□□□□ 0.41
SS18-216ENST00000580751 TMEM63BQ5T3F8 832 aa17.59■□□□□ 0.41
SS18-216ENST00000580751 GJC2Q5T442 439 aaPredicted RBP17.59■□□□□ 0.41
SS18-216ENST00000580751 PPP4R3AQ6IN85 833 aa17.59■□□□□ 0.41
SS18-216ENST00000580751 DHX37Q8IY37 1157 aaKnown RBP17.59■□□□□ 0.41
SS18-216ENST00000580751 EMID1Q96A84 441 aaPredicted RBP17.59■□□□□ 0.41
SS18-216ENST00000580751 NOL7Q9UMY1 257 aaKnown RBP17.59■□□□□ 0.41
SS18-216ENST00000580751 KIF28PB7ZC32 967 aa17.58■□□□□ 0.4
SS18-216ENST00000580751 KBTBD13C9JR72 458 aa17.58■□□□□ 0.4
SS18-216ENST00000580751 DNM1LO00429 736 aa17.58■□□□□ 0.4
SS18-216ENST00000580751 TDP2O95551 362 aa17.58■□□□□ 0.4
SS18-216ENST00000580751 MYCNP04198 464 aaPredicted RBP17.58■□□□□ 0.4
SS18-216ENST00000580751 KCNA2P16389 499 aa17.58■□□□□ 0.4
SS18-216ENST00000580751 TRAPPC10P48553 1259 aa17.58■□□□□ 0.4
SS18-216ENST00000580751 SOX10P56693 466 aa17.58■□□□□ 0.4
SS18-216ENST00000580751 SP2Q02086 613 aa17.58■□□□□ 0.4
SS18-216ENST00000580751 ARHGAP1Q07960 439 aa17.58■□□□□ 0.4
SS18-216ENST00000580751 LRRC41Q15345 812 aa17.58■□□□□ 0.4
SS18-216ENST00000580751 FSCN1Q16658 493 aaKnown RBP17.58■□□□□ 0.4
SS18-216ENST00000580751 Q4G0T1 1027 aa17.58■□□□□ 0.4
SS18-216ENST00000580751 CELF3Q5SZQ8 465 aaKnown RBP17.58■□□□□ 0.4
SS18-216ENST00000580751 METTL7BQ6UX53 244 aa17.58■□□□□ 0.4
SS18-216ENST00000580751 PCSK9Q8NBP7 692 aaKnown RBP17.58■□□□□ 0.4
SS18-216ENST00000580751 COPS5Q92905 334 aa17.58■□□□□ 0.4
SS18-216ENST00000580751 MBOAT7Q96N66 472 aa17.58■□□□□ 0.4
SS18-216ENST00000580751 MLXIPQ9HAP2 919 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms