RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 MYL10Q9BUA6 226 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 RTEL1Q9NZ71 1219 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 GTF2IRD1Q9UHL9 959 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 TELO2Q9Y4R8 837 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 U3KPZ7 1027 aaPredicted RBP10.37□□□□□ -0.75
GGA3-207ENST00000578896 LCHNA4D1U4 455 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 GCOM1H8Y6P7 765 aaPredicted RBP10.36□□□□□ -0.75
GGA3-207ENST00000578896 NBNO60934 754 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 POLR2MP0CAP2 368 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 CKBP12277 381 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 SELPP16109 830 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 UBA1P22314 1058 aaKnown RBP10.36□□□□□ -0.75
GGA3-207ENST00000578896 RFC2P35250 354 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 DEFB103AP81534 67 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 TFF2Q03403 129 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 TAP1Q03518 808 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 TROAPQ12815 778 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 LAMC2Q13753 1193 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 SKIV2LQ15477 1246 aaKnown RBP10.36□□□□□ -0.75
GGA3-207ENST00000578896 CELF3Q5SZQ8 465 aaKnown RBP10.36□□□□□ -0.75
GGA3-207ENST00000578896 MYSM1Q5VVJ2 828 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 LRRC8DQ7L1W4 858 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 RALYLQ86SE5 291 aaKnown RBP10.36□□□□□ -0.75
GGA3-207ENST00000578896 HERC6Q8IVU3 1022 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 NCOA7Q8NI08 942 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 PPTC7Q8NI37 304 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 NECAB3Q96P71 396 aaPredicted RBP10.36□□□□□ -0.75
GGA3-207ENST00000578896 RIOX1Q9H6W3 641 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 THEGQ9P2T0 379 aa10.36□□□□□ -0.75
GGA3-207ENST00000578896 PNMA6FA0A0J9YX94 578 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 hCG_1642624A0A1W2PR95 340 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 ERICH2A1L162 156 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 HAS3O00219 553 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 SGSM2O43147 1006 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 TLL1O43897 1013 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 RXRAP19793 462 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 KCNJ6P48051 423 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 WDR5P61964 334 aaKnown RBP10.35□□□□□ -0.75
GGA3-207ENST00000578896 GHRHRQ02643 423 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 MBTPS1Q14703 1052 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 TRIM71Q2Q1W2 868 aaKnown RBP10.35□□□□□ -0.75
GGA3-207ENST00000578896 ZNF618Q5T7W0 954 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 TRAF7Q6Q0C0 670 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 SESTD1Q86VW0 696 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 MB21D2Q8IYB1 491 aaPredicted RBP10.35□□□□□ -0.75
GGA3-207ENST00000578896 CMTR1Q8N1G2 835 aaKnown RBP10.35□□□□□ -0.75
GGA3-207ENST00000578896 CAGE1Q8TC20 777 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 IGDCC4Q8TDY8 1250 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 AFAP1L1Q8TED9 768 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 RUFY2Q8WXA3 655 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 SYMPKQ92797 1274 aaKnown RBP10.35□□□□□ -0.75
GGA3-207ENST00000578896 EMID1Q96A84 441 aaPredicted RBP10.35□□□□□ -0.75
GGA3-207ENST00000578896 ASB2Q96Q27 587 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 SLC9A7Q96T83 725 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 OSBPL7Q9BZF2 842 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 MLXIPQ9HAP2 919 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 MTUS1Q9ULD2 1270 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 RBM8AQ9Y5S9 174 aaKnown RBP10.35□□□□□ -0.75
GGA3-207ENST00000578896 MTCH2Q9Y6C9 303 aa10.35□□□□□ -0.75
GGA3-207ENST00000578896 KIF28PB7ZC32 967 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 F2P00734 622 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 CCND2P30279 289 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 MRPS5P82675 430 aaKnown RBP10.34□□□□□ -0.75
GGA3-207ENST00000578896 MRPS9P82933 396 aaKnown RBP10.34□□□□□ -0.75
GGA3-207ENST00000578896 SP4Q02446 784 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 SEMA3FQ13275 785 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 GRB10Q13322 594 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 USP17L6PQ6QN14 398 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.34□□□□□ -0.75
GGA3-207ENST00000578896 CATIPQ7Z7H3 387 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 CCDC155Q8N6L0 562 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 PHOSPHO2Q8TCD6 241 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 ADAMTS19Q8TE59 1207 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 ATXN2LQ8WWM7 1075 aaKnown RBP10.34□□□□□ -0.75
GGA3-207ENST00000578896 MAP4K1Q92918 833 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 C16orf70Q9BSU1 422 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 ZBED2Q9BTP6 218 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 LRRC2Q9BYS8 371 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 MAF1Q9H063 256 aa10.34□□□□□ -0.75
GGA3-207ENST00000578896 TNFRSF10AO00220 468 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 TREHO43280 583 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 PPFIA4O75335 1185 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 PLEKHA8P1O95397 391 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 CXCL10P02778 98 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 HOXD8P13378 290 aaPredicted RBP10.33□□□□□ -0.76
GGA3-207ENST00000578896 THPOP40225 353 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 KCNQ1P51787 676 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 PTK7Q13308 1070 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 UTP14CQ5TAP6 766 aaKnown RBP10.33□□□□□ -0.76
GGA3-207ENST00000578896 CNKSR3Q6P9H4 555 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 CYFIP1Q7L576 1253 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 TRIM50Q86XT4 487 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 ZNF654Q8IZM8 581 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 CCDC82Q8N4S0 544 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 GDPD5Q8WTR4 605 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 KATNAL1Q9BW62 490 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 LY9Q9HBG7 655 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 MAP3K20Q9NYL2 800 aaKnown RBP10.33□□□□□ -0.76
GGA3-207ENST00000578896 RAPGEFL1Q9UHV5 662 aa10.33□□□□□ -0.76
GGA3-207ENST00000578896 MICAL3Q7RTP6 2002 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms