RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 SH2B2O14492 632 aaPredicted RBP13.13□□□□□ -0.31
LITAF-206ENST00000571277 PPFIA4O75335 1185 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 GGPS1O95749 300 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 SMARCA1P28370 1054 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 CCND2P30279 289 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 PSEN2P49810 448 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 BFSP2Q13515 415 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 HIC1Q14526 733 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 KCNV1Q6PIU1 500 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 RETREG2Q8NC44 543 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 CAGE1Q8TC20 777 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 AFAP1L1Q8TED9 768 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 INPP4AQ96PE3 977 aaPredicted RBP13.13□□□□□ -0.31
LITAF-206ENST00000571277 C16orf70Q9BSU1 422 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 SLC28A3Q9HAS3 691 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 NOD1Q9Y239 953 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 PCDHA11Q9Y5I1 949 aa13.13□□□□□ -0.31
LITAF-206ENST00000571277 RBAK-RBAKDNI3L0D1 243 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 MEIS2O14770 477 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 SORBS3O60504 671 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 PLEKHA8P1O95397 391 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 KIF5BP33176 963 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 MCM5P33992 734 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 LIFRP42702 1097 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 SEMA3FQ13275 785 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 MFSD10Q14728 455 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 KIAA0753Q2KHM9 967 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 TRIM71Q2Q1W2 868 aaKnown RBP13.12□□□□□ -0.31
LITAF-206ENST00000571277 BMP2KLQ5H9B9 411 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 CREB3L3Q68CJ9 461 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 TRAF7Q6Q0C0 670 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 SRBD1Q8N5C6 995 aaKnown RBP13.12□□□□□ -0.31
LITAF-206ENST00000571277 C7orf31Q8N865 590 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 CTCFLQ8NI51 663 aaPredicted RBP13.12□□□□□ -0.31
LITAF-206ENST00000571277 WNT8BQ93098 351 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 TMEM87BQ96K49 555 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 SPATA33Q96N06 139 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 ALG1Q9BT22 464 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 KATNAL1Q9BW62 490 aa13.12□□□□□ -0.31
LITAF-206ENST00000571277 TRANK1O15050 2925 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 SPATA31C2B4DYI2 1134 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 PIK3CDO00329 1044 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 CKBP12277 381 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 ACTN1P12814 892 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 SELPP16109 830 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 HOXC8P31273 242 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 ICAM3P32942 547 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 ZNF200P98182 395 aaPredicted RBP13.11□□□□□ -0.31
LITAF-206ENST00000571277 TCTN1Q2MV58 587 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 USP17L6PQ6QN14 398 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 CASC1Q6TDU7 716 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 LRRC8DQ7L1W4 858 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 CMTR1Q8N1G2 835 aaKnown RBP13.11□□□□□ -0.31
LITAF-206ENST00000571277 TMTC2Q8N394 836 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 CCDC155Q8N6L0 562 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 RRP36Q96EU6 259 aaKnown RBP13.11□□□□□ -0.31
LITAF-206ENST00000571277 GAS2L1Q99501 681 aaPredicted RBP13.11□□□□□ -0.31
LITAF-206ENST00000571277 LZTS2Q9BRK4 669 aa13.11□□□□□ -0.31
LITAF-206ENST00000571277 NBNO60934 754 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 STAM2O75886 525 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 BAIAP3O94812 1187 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 ARHGEF15O94989 841 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 CXCL10P02778 98 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 RXRAP19793 462 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 PTK7Q13308 1070 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 MBTPS1Q14703 1052 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 PCNX4Q63HM2 1172 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 PPP2R2DQ66LE6 453 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 PHOSPHO2Q8TCD6 241 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 SLC9A7Q96T83 725 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 FTOQ9C0B1 505 aaKnown RBP eCLIP13.1□□□□□ -0.31
LITAF-206ENST00000571277 ANO2Q9NQ90 1003 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 PRDM6Q9NQX0 595 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 TELO2Q9Y4R8 837 aa13.1□□□□□ -0.31
LITAF-206ENST00000571277 CCDC69A6NI79 296 aa13.09□□□□□ -0.31
LITAF-206ENST00000571277 CA3P07451 260 aa13.09□□□□□ -0.31
LITAF-206ENST00000571277 GNAQP50148 359 aa13.09□□□□□ -0.31
LITAF-206ENST00000571277 GNPTABQ3T906 1256 aa13.09□□□□□ -0.31
LITAF-206ENST00000571277 METTL7BQ6UX53 244 aa13.09□□□□□ -0.31
LITAF-206ENST00000571277 NFXL1Q6ZNB6 911 aa13.09□□□□□ -0.31
LITAF-206ENST00000571277 CENPQQ7L2Z9 268 aaPredicted RBP13.09□□□□□ -0.31
LITAF-206ENST00000571277 SERINC5Q86VE9 423 aa13.09□□□□□ -0.31
LITAF-206ENST00000571277 SGMS1Q86VZ5 419 aa13.09□□□□□ -0.31
LITAF-206ENST00000571277 RAB11FIP4Q86YS3 637 aa13.09□□□□□ -0.31
LITAF-206ENST00000571277 HERC6Q8IVU3 1022 aa13.09□□□□□ -0.31
LITAF-206ENST00000571277 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
LITAF-206ENST00000571277 MLXIPQ9HAP2 919 aa13.09□□□□□ -0.31
LITAF-206ENST00000571277 RTEL1Q9NZ71 1219 aa13.09□□□□□ -0.31
LITAF-206ENST00000571277 MUC3AQ02505 3323 aa13.09□□□□□ -0.31
LITAF-206ENST00000571277 PRRC2BQ5JSZ5 2229 aaKnown RBP13.08□□□□□ -0.32
LITAF-206ENST00000571277 REV3LO60673 3130 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 hCG_1642624A0A1W2PR95 340 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 H3BRB1 525 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 FIBPO43427 364 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 PARNO95453 639 aaKnown RBP13.08□□□□□ -0.32
LITAF-206ENST00000571277 LGALS2P05162 132 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 CALM1P0DP23 149 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 CALM2P0DP24 149 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 CALM3P0DP25 149 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms