RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 ASB11Q8WXH4 323 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 PUS7LQ9H0K6 701 aaKnown RBP7.77□□□□□ -1.17
UBR1-208ENST00000569066 C22orf46C9J442 243 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 TGM5O43548 720 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 DYRK3O43781 588 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 MSL3P1P0C860 447 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 GNAT1P11488 350 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 KCNMA1Q12791 1236 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 WFDC3Q8IUB2 231 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 PIP4K2CQ8TBX8 421 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 SH3RF2Q8TEC5 729 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 RTFDC1Q9BY42 306 aaPredicted RBP7.77□□□□□ -1.17
UBR1-208ENST00000569066 TCEAL9Q9UHQ7 104 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 DVL2O14641 736 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 NPHS1O60500 1241 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 SLC9A1P19634 815 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 LSSP48449 732 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 KPNA1P52294 538 aaPredicted RBP7.76□□□□□ -1.17
UBR1-208ENST00000569066 PPP2R5AQ15172 486 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 ARHGAP36Q6ZRI8 547 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 SPRED2Q7Z698 418 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 SLCO6A1Q86UG4 719 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 PLEKHO2Q8TD55 490 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 LINC01599Q8WXQ3 324 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 HOOK2Q96ED9 719 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 TRMT2BQ96GJ1 504 aaKnown RBP7.76□□□□□ -1.17
UBR1-208ENST00000569066 TSPAN6O43657 245 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 MT-CO1P00395 513 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 ZGLP1P0C6A0 271 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 CRY1Q16526 586 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 HSP90AB2PQ58FF8 381 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 PLCD4Q9BRC7 762 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 CD244Q9BZW8 370 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 SLAMF8Q9P0V8 285 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 IMPACTQ9P2X3 320 aa7.76□□□□□ -1.17
UBR1-208ENST00000569066 PRPF3O43395 683 aaKnown RBP7.75□□□□□ -1.17
UBR1-208ENST00000569066 ERVK-21P61565 698 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 PRKCQQ04759 706 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 DDB1Q16531 1140 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 BROXQ5VW32 411 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 HLA-DQA1Q5Y7H0 255 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 CEP128Q6ZU80 1094 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 SPOCK3Q9BQ16 436 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 ZBTB48P10074 688 aaPredicted RBP7.75□□□□□ -1.17
UBR1-208ENST00000569066 CD8BP10966 210 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 GALK1P51570 392 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 IRF9Q00978 393 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 SEC23AQ15436 765 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 Q8N1Y9 231 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 CHMP4AQ9BY43 222 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 AASDHPPTQ9NRN7 309 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 C14orf119Q9NWQ9 140 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 STK17AQ9UEE5 414 aa7.75□□□□□ -1.17
UBR1-208ENST00000569066 PTX3P26022 381 aaPredicted RBP7.74□□□□□ -1.17
UBR1-208ENST00000569066 RTP1P59025 263 aa7.74□□□□□ -1.17
UBR1-208ENST00000569066 PTPN21Q16825 1174 aa7.74□□□□□ -1.17
UBR1-208ENST00000569066 OTOP1Q7RTM1 612 aa7.74□□□□□ -1.17
UBR1-208ENST00000569066 NOSTRINQ8IVI9 506 aa7.74□□□□□ -1.17
UBR1-208ENST00000569066 MTA3Q9BTC8 594 aa7.74□□□□□ -1.17
UBR1-208ENST00000569066 NOTOA8MTQ0 251 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 MAN2B1O00754 1011 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 GSTA4O15217 222 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 GRIK1P39086 918 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 GTF2A2P52657 109 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 LACTBP83111 547 aaPredicted RBP7.73□□□□□ -1.17
UBR1-208ENST00000569066 PIN1Q13526 163 aaPredicted RBP7.73□□□□□ -1.17
UBR1-208ENST00000569066 OTOP3Q7RTS5 596 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 SLC5A5Q92911 643 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 RXFP1Q9HBX9 757 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 LTFP02788 710 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 MYBL2P10244 700 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 HK2P52789 917 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 TBX4P57082 545 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 ZP2Q05996 745 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 HSF5Q4G112 596 aaPredicted RBP7.73□□□□□ -1.17
UBR1-208ENST00000569066 ZBTB46Q86UZ6 589 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 BCL7CQ8WUZ0 217 aaPredicted RBP7.73□□□□□ -1.17
UBR1-208ENST00000569066 ELF4Q99607 663 aaPredicted RBP7.73□□□□□ -1.17
UBR1-208ENST00000569066 BOCQ9BWV1 1114 aa7.73□□□□□ -1.17
UBR1-208ENST00000569066 NOB1Q9ULX3 412 aaKnown RBP7.73□□□□□ -1.17
UBR1-208ENST00000569066 H7BY64 318 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 MAP4K4O95819 1239 aaPredicted RBP7.72□□□□□ -1.17
UBR1-208ENST00000569066 NTRK1P04629 796 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 ENDOUP21128 410 aaKnown RBP7.72□□□□□ -1.17
UBR1-208ENST00000569066 ANGEL2Q5VTE6 544 aaKnown RBP7.72□□□□□ -1.17
UBR1-208ENST00000569066 C11orf74Q86VG3 221 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 USP33Q8TEY7 942 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 AHCYL2Q96HN2 611 aaKnown RBP7.72□□□□□ -1.17
UBR1-208ENST00000569066 TNFRSF10DQ9UBN6 386 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 X6R8D5 127 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 SCDO00767 359 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 MVKQ03426 396 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 TIGD5Q53EQ6 642 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 CCDC181Q5TID7 509 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.72□□□□□ -1.17
UBR1-208ENST00000569066 CHMP4CQ96CF2 233 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 ALPK1Q96QP1 1244 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 TOPORSQ9NS56 1045 aaPredicted RBP7.72□□□□□ -1.17
UBR1-208ENST00000569066 TMEM59LQ9UK28 342 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 VAV3Q9UKW4 847 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms