RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 MTMR1Q13613 665 aa17.63■□□□□ 0.41
CDH11-209ENST00000564317 MTFR1Q15390 333 aa17.63■□□□□ 0.41
CDH11-209ENST00000564317 GNPTABQ3T906 1256 aa17.63■□□□□ 0.41
CDH11-209ENST00000564317 Q4G0T1 1027 aa17.63■□□□□ 0.41
CDH11-209ENST00000564317 GJC2Q5T442 439 aaPredicted RBP17.63■□□□□ 0.41
CDH11-209ENST00000564317 PPP4R3AQ6IN85 833 aa17.63■□□□□ 0.41
CDH11-209ENST00000564317 CCDC62Q6P9F0 684 aa17.63■□□□□ 0.41
CDH11-209ENST00000564317 NLRX1Q86UT6 975 aa17.63■□□□□ 0.41
CDH11-209ENST00000564317 SCFD2Q8WU76 684 aa17.63■□□□□ 0.41
CDH11-209ENST00000564317 ZNF333Q96JL9 665 aa17.63■□□□□ 0.41
CDH11-209ENST00000564317 UIMC1Q96RL1 719 aa17.63■□□□□ 0.41
CDH11-209ENST00000564317 ZSCAN16Q9H4T2 348 aaPredicted RBP17.63■□□□□ 0.41
CDH11-209ENST00000564317 PKD2L1Q9P0L9 805 aa17.63■□□□□ 0.41
CDH11-209ENST00000564317 DDX25Q9UHL0 483 aaKnown RBP17.63■□□□□ 0.41
CDH11-209ENST00000564317 PCDHB6Q9Y5E3 794 aa17.63■□□□□ 0.41
CDH11-209ENST00000564317 MRVI1Q9Y6F6 885 aa17.63■□□□□ 0.41
CDH11-209ENST00000564317 HTTP42858 3142 aa17.63■□□□□ 0.41
CDH11-209ENST00000564317 ATP9AO75110 1047 aa17.62■□□□□ 0.41
CDH11-209ENST00000564317 GCFC2P16383 781 aaKnown RBP17.62■□□□□ 0.41
CDH11-209ENST00000564317 CNGA1P29973 690 aa17.62■□□□□ 0.41
CDH11-209ENST00000564317 SP2Q02086 613 aa17.62■□□□□ 0.41
CDH11-209ENST00000564317 ZNF174Q15697 407 aa17.62■□□□□ 0.41
CDH11-209ENST00000564317 LY6KQ17RY6 165 aa17.62■□□□□ 0.41
CDH11-209ENST00000564317 RILPL1Q5EBL4 403 aa17.62■□□□□ 0.41
CDH11-209ENST00000564317 POTEDQ86YR6 584 aa17.62■□□□□ 0.41
CDH11-209ENST00000564317 COPS5Q92905 334 aa17.62■□□□□ 0.41
CDH11-209ENST00000564317 BCAS3Q9H6U6 928 aa17.62■□□□□ 0.41
CDH11-209ENST00000564317 AGO4Q9HCK5 861 aaKnown RBP17.62■□□□□ 0.41
CDH11-209ENST00000564317 KCNH7Q9NS40 1196 aa17.62■□□□□ 0.41
CDH11-209ENST00000564317 DDX41Q9UJV9 622 aaKnown RBP17.62■□□□□ 0.41
CDH11-209ENST00000564317 FAM184BQ9ULE4 1060 aa17.62■□□□□ 0.41
CDH11-209ENST00000564317 KIAA1217Q5T5P2 1943 aa17.62■□□□□ 0.41
CDH11-209ENST00000564317 MSH4O15457 936 aa17.61■□□□□ 0.41
CDH11-209ENST00000564317 SEPT4O43236 478 aa17.61■□□□□ 0.41
CDH11-209ENST00000564317 TXNP10599 105 aaKnown RBP17.61■□□□□ 0.41
CDH11-209ENST00000564317 CCL5P13501 91 aa17.61■□□□□ 0.41
CDH11-209ENST00000564317 AKR1A1P14550 325 aa17.61■□□□□ 0.41
CDH11-209ENST00000564317 KCNA2P16389 499 aa17.61■□□□□ 0.41
CDH11-209ENST00000564317 UBA1P22314 1058 aaKnown RBP17.61■□□□□ 0.41
CDH11-209ENST00000564317 MCM7P33993 719 aa17.61■□□□□ 0.41
CDH11-209ENST00000564317 SETQ01105 290 aaPredicted RBP17.61■□□□□ 0.41
CDH11-209ENST00000564317 ITGB3BPQ13352 177 aaPredicted RBP17.61■□□□□ 0.41
CDH11-209ENST00000564317 TTLL4Q14679 1199 aa17.61■□□□□ 0.41
CDH11-209ENST00000564317 COL13A1Q5TAT6 717 aaPredicted RBP17.61■□□□□ 0.41
CDH11-209ENST00000564317 ANO1Q5XXA6 986 aa17.61■□□□□ 0.41
CDH11-209ENST00000564317 IQSEC1Q6DN90 963 aa17.61■□□□□ 0.41
CDH11-209ENST00000564317 ETNPPLQ8TBG4 499 aa17.61■□□□□ 0.41
CDH11-209ENST00000564317 GJA10Q969M2 543 aa17.61■□□□□ 0.41
CDH11-209ENST00000564317 NAP1L4Q99733 375 aaKnown RBP17.61■□□□□ 0.41
CDH11-209ENST00000564317 FTOQ9C0B1 505 aaKnown RBP eCLIP17.61■□□□□ 0.41
CDH11-209ENST00000564317 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.61■□□□□ 0.41
CDH11-209ENST00000564317 TMEM60Q9H2L4 133 aa17.61■□□□□ 0.41
CDH11-209ENST00000564317 HMX1Q9NP08 348 aaPredicted RBP17.61■□□□□ 0.41
CDH11-209ENST00000564317 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.61■□□□□ 0.41
CDH11-209ENST00000564317 CIZ1Q9ULV3 898 aaPredicted RBP17.61■□□□□ 0.41
CDH11-209ENST00000564317 GNEQ9Y223 722 aaKnown RBP17.61■□□□□ 0.41
CDH11-209ENST00000564317 POTEFA5A3E0 1075 aa17.6■□□□□ 0.41
CDH11-209ENST00000564317 SORBS3O60504 671 aa17.6■□□□□ 0.41
CDH11-209ENST00000564317 NUCB2P80303 420 aa17.6■□□□□ 0.41
CDH11-209ENST00000564317 TNFAIP2Q03169 654 aa17.6■□□□□ 0.41
CDH11-209ENST00000564317 FOXD4L6Q3SYB3 417 aaPredicted RBP17.6■□□□□ 0.41
CDH11-209ENST00000564317 DUSP28Q4G0W2 176 aa17.6■□□□□ 0.41
CDH11-209ENST00000564317 FOXD4L3Q6VB84 417 aaPredicted RBP17.6■□□□□ 0.41
CDH11-209ENST00000564317 CHAMP1Q96JM3 812 aa17.6■□□□□ 0.41
CDH11-209ENST00000564317 CDHR1Q96JP9 859 aa17.6■□□□□ 0.41
CDH11-209ENST00000564317 KCNMB3Q9NPA1 279 aa17.6■□□□□ 0.41
CDH11-209ENST00000564317 DDX20Q9UHI6 824 aaKnown RBP17.6■□□□□ 0.41
CDH11-209ENST00000564317 NEMFO60524 1076 aa17.59■□□□□ 0.41
CDH11-209ENST00000564317 KCNV1Q6PIU1 500 aa17.59■□□□□ 0.41
CDH11-209ENST00000564317 C4orf32Q8N8J7 132 aa17.59■□□□□ 0.41
CDH11-209ENST00000564317 HAS1Q92839 578 aa17.59■□□□□ 0.41
CDH11-209ENST00000564317 ZNF577Q9BSK1 485 aa17.59■□□□□ 0.41
CDH11-209ENST00000564317 PAK6Q9NQU5 681 aaPredicted RBP17.59■□□□□ 0.41
CDH11-209ENST00000564317 TELO2Q9Y4R8 837 aa17.59■□□□□ 0.41
CDH11-209ENST00000564317 IPO5O00410 1097 aaKnown RBP17.58■□□□□ 0.4
CDH11-209ENST00000564317 MAFGO15525 162 aa17.58■□□□□ 0.4
CDH11-209ENST00000564317 DHX15O43143 795 aaKnown RBP17.58■□□□□ 0.4
CDH11-209ENST00000564317 GGPS1O95749 300 aa17.58■□□□□ 0.4
CDH11-209ENST00000564317 TGFB3P10600 412 aa17.58■□□□□ 0.4
CDH11-209ENST00000564317 IRX5P78411 483 aaPredicted RBP17.58■□□□□ 0.4
CDH11-209ENST00000564317 ARHGAP1Q07960 439 aa17.58■□□□□ 0.4
CDH11-209ENST00000564317 ORC2Q13416 577 aaPredicted RBP17.58■□□□□ 0.4
CDH11-209ENST00000564317 LHX8Q68G74 356 aa17.58■□□□□ 0.4
CDH11-209ENST00000564317 SLC5A5Q92911 643 aa17.58■□□□□ 0.4
CDH11-209ENST00000564317 USP28Q96RU2 1077 aa17.58■□□□□ 0.4
CDH11-209ENST00000564317 CLIC4Q9Y696 253 aa17.58■□□□□ 0.4
CDH11-209ENST00000564317 DUSP11O75319 330 aaKnown RBP17.57■□□□□ 0.4
CDH11-209ENST00000564317 GH1P01241 217 aa17.57■□□□□ 0.4
CDH11-209ENST00000564317 CALCRLQ16602 461 aa17.57■□□□□ 0.4
CDH11-209ENST00000564317 CELF3Q5SZQ8 465 aaKnown RBP17.57■□□□□ 0.4
CDH11-209ENST00000564317 TLK2Q86UE8 772 aa17.57■□□□□ 0.4
CDH11-209ENST00000564317 MTMR9Q96QG7 549 aa17.57■□□□□ 0.4
CDH11-209ENST00000564317 SENP7Q9BQF6 1050 aa17.57■□□□□ 0.4
CDH11-209ENST00000564317 RNF208Q9H0X6 261 aa17.57■□□□□ 0.4
CDH11-209ENST00000564317 CHMP5Q9NZZ3 219 aa17.57■□□□□ 0.4
CDH11-209ENST00000564317 MYH15Q9Y2K3 1946 aa17.57■□□□□ 0.4
CDH11-209ENST00000564317 NFASCO94856 1347 aa17.56■□□□□ 0.4
CDH11-209ENST00000564317 SYNRGQ9UMZ2 1314 aa17.56■□□□□ 0.4
CDH11-209ENST00000564317 MYADML2A6NDP7 307 aa17.56■□□□□ 0.4
CDH11-209ENST00000564317 DDX39AO00148 427 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms