RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 SH3TC2Q8TF17 1288 aa19.77■□□□□ 0.76
TUBB3-211ENST00000556536 CHAMP1Q96JM3 812 aa19.77■□□□□ 0.76
TUBB3-211ENST00000556536 UIMC1Q96RL1 719 aa19.77■□□□□ 0.76
TUBB3-211ENST00000556536 FTOQ9C0B1 505 aaKnown RBP eCLIP19.77■□□□□ 0.76
TUBB3-211ENST00000556536 DDX25Q9UHL0 483 aaKnown RBP19.77■□□□□ 0.76
TUBB3-211ENST00000556536 PLXNA1Q9UIW2 1896 aa19.77■□□□□ 0.76
TUBB3-211ENST00000556536 INHAP05111 366 aa19.76■□□□□ 0.75
TUBB3-211ENST00000556536 CYBAP13498 195 aa19.76■□□□□ 0.75
TUBB3-211ENST00000556536 PRKAR2AP13861 404 aaKnown RBP19.76■□□□□ 0.75
TUBB3-211ENST00000556536 GCFC2P16383 781 aaKnown RBP19.76■□□□□ 0.75
TUBB3-211ENST00000556536 EN2P19622 333 aaPredicted RBP19.76■□□□□ 0.75
TUBB3-211ENST00000556536 MCM7P33993 719 aa19.76■□□□□ 0.75
TUBB3-211ENST00000556536 Q4G0T1 1027 aa19.76■□□□□ 0.75
TUBB3-211ENST00000556536 TMEM63BQ5T3F8 832 aa19.76■□□□□ 0.75
TUBB3-211ENST00000556536 MAP3K21Q5TCX8 1036 aa19.76■□□□□ 0.75
TUBB3-211ENST00000556536 NIPA1Q7RTP0 329 aa19.76■□□□□ 0.75
TUBB3-211ENST00000556536 NLRX1Q86UT6 975 aa19.76■□□□□ 0.75
TUBB3-211ENST00000556536 PLA2G4DQ86XP0 818 aa19.76■□□□□ 0.75
TUBB3-211ENST00000556536 GPRASP2Q96D09 838 aa19.76■□□□□ 0.75
TUBB3-211ENST00000556536 LRRC37A2A6NM11 1700 aa19.76■□□□□ 0.75
TUBB3-211ENST00000556536 RBM47A0AV96 593 aaKnown RBP19.75■□□□□ 0.75
TUBB3-211ENST00000556536 SPATA31C2B4DYI2 1134 aa19.75■□□□□ 0.75
TUBB3-211ENST00000556536 ARIH2O95376 493 aa19.75■□□□□ 0.75
TUBB3-211ENST00000556536 MTMR1Q13613 665 aa19.75■□□□□ 0.75
TUBB3-211ENST00000556536 GNPTABQ3T906 1256 aa19.75■□□□□ 0.75
TUBB3-211ENST00000556536 POTEDQ86YR6 584 aa19.75■□□□□ 0.75
TUBB3-211ENST00000556536 NAP1L4Q99733 375 aaKnown RBP19.75■□□□□ 0.75
TUBB3-211ENST00000556536 TMEM106CQ9BVX2 250 aa19.75■□□□□ 0.75
TUBB3-211ENST00000556536 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.75■□□□□ 0.75
TUBB3-211ENST00000556536 KCNH7Q9NS40 1196 aa19.75■□□□□ 0.75
TUBB3-211ENST00000556536 NRBP1Q9UHY1 535 aa19.75■□□□□ 0.75
TUBB3-211ENST00000556536 CLIC4Q9Y696 253 aa19.75■□□□□ 0.75
TUBB3-211ENST00000556536 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.74■□□□□ 0.75
TUBB3-211ENST00000556536 MSH4O15457 936 aa19.74■□□□□ 0.75
TUBB3-211ENST00000556536 FIBPO43427 364 aa19.74■□□□□ 0.75
TUBB3-211ENST00000556536 PTGS1P23219 599 aa19.74■□□□□ 0.75
TUBB3-211ENST00000556536 CCND3P30281 292 aaPredicted RBP19.74■□□□□ 0.75
TUBB3-211ENST00000556536 ICAM3P32942 547 aa19.74■□□□□ 0.75
TUBB3-211ENST00000556536 ADCYAP1R1P41586 468 aa19.74■□□□□ 0.75
TUBB3-211ENST00000556536 CCDC144BQ3MJ40 725 aa19.74■□□□□ 0.75
TUBB3-211ENST00000556536 CCDC62Q6P9F0 684 aa19.74■□□□□ 0.75
TUBB3-211ENST00000556536 GJA10Q969M2 543 aa19.74■□□□□ 0.75
TUBB3-211ENST00000556536 USP28Q96RU2 1077 aa19.74■□□□□ 0.75
TUBB3-211ENST00000556536 TMEM60Q9H2L4 133 aa19.74■□□□□ 0.75
TUBB3-211ENST00000556536 AGO4Q9HCK5 861 aaKnown RBP19.74■□□□□ 0.75
TUBB3-211ENST00000556536 PKD2L1Q9P0L9 805 aa19.74■□□□□ 0.75
TUBB3-211ENST00000556536 TFIP11Q9UBB9 837 aaKnown RBP19.74■□□□□ 0.75
TUBB3-211ENST00000556536 MRVI1Q9Y6F6 885 aa19.74■□□□□ 0.75
TUBB3-211ENST00000556536 ADCY6O43306 1168 aa19.73■□□□□ 0.75
TUBB3-211ENST00000556536 NEMFO60524 1076 aa19.73■□□□□ 0.75
TUBB3-211ENST00000556536 ATP9AO75110 1047 aa19.73■□□□□ 0.75
TUBB3-211ENST00000556536 SETQ01105 290 aaPredicted RBP19.73■□□□□ 0.75
TUBB3-211ENST00000556536 SP2Q02086 613 aa19.73■□□□□ 0.75
TUBB3-211ENST00000556536 DNM1Q05193 864 aaKnown RBP19.73■□□□□ 0.75
TUBB3-211ENST00000556536 LY6KQ17RY6 165 aa19.73■□□□□ 0.75
TUBB3-211ENST00000556536 SLC9C1Q4G0N8 1177 aa19.73■□□□□ 0.75
TUBB3-211ENST00000556536 C4orf32Q8N8J7 132 aa19.73■□□□□ 0.75
TUBB3-211ENST00000556536 ETNPPLQ8TBG4 499 aa19.73■□□□□ 0.75
TUBB3-211ENST00000556536 SCFD2Q8WU76 684 aa19.73■□□□□ 0.75
TUBB3-211ENST00000556536 BCAS3Q9H6U6 928 aa19.73■□□□□ 0.75
TUBB3-211ENST00000556536 DDX41Q9UJV9 622 aaKnown RBP19.73■□□□□ 0.75
TUBB3-211ENST00000556536 TXNP10599 105 aaKnown RBP19.72■□□□□ 0.75
TUBB3-211ENST00000556536 SMPD1P17405 629 aa19.72■□□□□ 0.75
TUBB3-211ENST00000556536 CEBPZQ03701 1054 aaKnown RBP19.72■□□□□ 0.75
TUBB3-211ENST00000556536 ITGB3BPQ13352 177 aaPredicted RBP19.72■□□□□ 0.75
TUBB3-211ENST00000556536 ORC2Q13416 577 aaPredicted RBP19.72■□□□□ 0.75
TUBB3-211ENST00000556536 SF3A1Q15459 793 aaKnown RBP19.72■□□□□ 0.75
TUBB3-211ENST00000556536 GJC2Q5T442 439 aaPredicted RBP19.72■□□□□ 0.75
TUBB3-211ENST00000556536 HAS1Q92839 578 aa19.72■□□□□ 0.75
TUBB3-211ENST00000556536 COPS5Q92905 334 aa19.72■□□□□ 0.75
TUBB3-211ENST00000556536 LENG1Q96BZ8 264 aaPredicted RBP19.72■□□□□ 0.75
TUBB3-211ENST00000556536 ZNF333Q96JL9 665 aa19.72■□□□□ 0.75
TUBB3-211ENST00000556536 CDHR1Q96JP9 859 aa19.72■□□□□ 0.75
TUBB3-211ENST00000556536 ZNF396Q96N95 335 aaPredicted RBP19.72■□□□□ 0.75
TUBB3-211ENST00000556536 ZNF577Q9BSK1 485 aa19.72■□□□□ 0.75
TUBB3-211ENST00000556536 KCNMB3Q9NPA1 279 aa19.72■□□□□ 0.75
TUBB3-211ENST00000556536 MYH7BA7E2Y1 1941 aa19.72■□□□□ 0.75
TUBB3-211ENST00000556536 MAFGO15525 162 aa19.71■□□□□ 0.75
TUBB3-211ENST00000556536 SORBS3O60504 671 aa19.71■□□□□ 0.75
TUBB3-211ENST00000556536 KCNA2P16389 499 aa19.71■□□□□ 0.75
TUBB3-211ENST00000556536 UBA1P22314 1058 aaKnown RBP19.71■□□□□ 0.75
TUBB3-211ENST00000556536 CNGA1P29973 690 aa19.71■□□□□ 0.75
TUBB3-211ENST00000556536 PTGDRQ13258 359 aa19.71■□□□□ 0.75
TUBB3-211ENST00000556536 TTLL4Q14679 1199 aa19.71■□□□□ 0.75
TUBB3-211ENST00000556536 CALCRLQ16602 461 aa19.71■□□□□ 0.75
TUBB3-211ENST00000556536 ANO1Q5XXA6 986 aa19.71■□□□□ 0.75
TUBB3-211ENST00000556536 IQSEC1Q6DN90 963 aa19.71■□□□□ 0.75
TUBB3-211ENST00000556536 SLC5A5Q92911 643 aa19.71■□□□□ 0.75
TUBB3-211ENST00000556536 MTMR9Q96QG7 549 aa19.71■□□□□ 0.75
TUBB3-211ENST00000556536 FAM184BQ9ULE4 1060 aa19.71■□□□□ 0.75
TUBB3-211ENST00000556536 IPO5O00410 1097 aaKnown RBP19.7■□□□□ 0.74
TUBB3-211ENST00000556536 TGFB3P10600 412 aa19.7■□□□□ 0.74
TUBB3-211ENST00000556536 TNFAIP2Q03169 654 aa19.7■□□□□ 0.74
TUBB3-211ENST00000556536 PTPAQ15257 358 aa19.7■□□□□ 0.74
TUBB3-211ENST00000556536 KCNV1Q6PIU1 500 aa19.7■□□□□ 0.74
TUBB3-211ENST00000556536 ATP6V1DQ9Y5K8 247 aa19.7■□□□□ 0.74
TUBB3-211ENST00000556536 DHX15O43143 795 aaKnown RBP19.69■□□□□ 0.74
TUBB3-211ENST00000556536 SEPT4O43236 478 aa19.69■□□□□ 0.74
TUBB3-211ENST00000556536 MYCP01106 439 aaPredicted RBP19.69■□□□□ 0.74
TUBB3-211ENST00000556536 OR52Z1P0C646 297 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms