RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 F2P00734 622 aa17.68■□□□□ 0.42
SNX29P1-201ENST00000548357 BFSP2Q13515 415 aa17.68■□□□□ 0.42
SNX29P1-201ENST00000548357 HSDL1Q3SXM5 330 aa17.68■□□□□ 0.42
SNX29P1-201ENST00000548357 TMEM67Q5HYA8 995 aa17.68■□□□□ 0.42
SNX29P1-201ENST00000548357 HERC6Q8IVU3 1022 aa17.68■□□□□ 0.42
SNX29P1-201ENST00000548357 RETREG2Q8NC44 543 aa17.68■□□□□ 0.42
SNX29P1-201ENST00000548357 PIBF1Q8WXW3 757 aa17.68■□□□□ 0.42
SNX29P1-201ENST00000548357 SLC9A7Q96T83 725 aa17.68■□□□□ 0.42
SNX29P1-201ENST00000548357 OSBPL7Q9BZF2 842 aa17.68■□□□□ 0.42
SNX29P1-201ENST00000548357 IFIT3O14879 490 aaKnown RBP17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 GGPS1O95749 300 aa17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 CKBP12277 381 aa17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 HOXD8P13378 290 aaPredicted RBP17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 CASTP20810 708 aaKnown RBP17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 UBA1P22314 1058 aaKnown RBP17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 WDR5P61964 334 aaKnown RBP17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 TFF2Q03403 129 aa17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 TROAPQ12815 778 aa17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 SEMA3FQ13275 785 aa17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 DGKDQ16760 1214 aa17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 KIAA0753Q2KHM9 967 aa17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 MYSM1Q5VVJ2 828 aa17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 LRRC8DQ7L1W4 858 aa17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 FCHSD1Q86WN1 690 aa17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 DHX37Q8IY37 1157 aaKnown RBP17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 MB21D2Q8IYB1 491 aaPredicted RBP17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 PPTC7Q8NI37 304 aa17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 MYL10Q9BUA6 226 aa17.67■□□□□ 0.42
SNX29P1-201ENST00000548357 SGSM2O43147 1006 aa17.66■□□□□ 0.42
SNX29P1-201ENST00000548357 ACTN1P12814 892 aa17.66■□□□□ 0.42
SNX29P1-201ENST00000548357 SELPP16109 830 aa17.66■□□□□ 0.42
SNX29P1-201ENST00000548357 RBL2Q08999 1139 aa17.66■□□□□ 0.42
SNX29P1-201ENST00000548357 CELF3Q5SZQ8 465 aaKnown RBP17.66■□□□□ 0.42
SNX29P1-201ENST00000548357 ZNF618Q5T7W0 954 aa17.66■□□□□ 0.42
SNX29P1-201ENST00000548357 VSIG10LQ86VR7 867 aa17.66■□□□□ 0.42
SNX29P1-201ENST00000548357 CAGE1Q8TC20 777 aa17.66■□□□□ 0.42
SNX29P1-201ENST00000548357 AFAP1L1Q8TED9 768 aa17.66■□□□□ 0.42
SNX29P1-201ENST00000548357 NECAB3Q96P71 396 aaPredicted RBP17.66■□□□□ 0.42
SNX29P1-201ENST00000548357 ASB2Q96Q27 587 aa17.66■□□□□ 0.42
SNX29P1-201ENST00000548357 MTCH2Q9Y6C9 303 aa17.66■□□□□ 0.42
SNX29P1-201ENST00000548357 LPXNO60711 386 aa17.65■□□□□ 0.42
SNX29P1-201ENST00000548357 CXCL10P02778 98 aa17.65■□□□□ 0.42
SNX29P1-201ENST00000548357 MRPS9P82933 396 aaKnown RBP17.65■□□□□ 0.42
SNX29P1-201ENST00000548357 LAMC2Q13753 1193 aa17.65■□□□□ 0.42
SNX29P1-201ENST00000548357 WTAPQ15007 396 aa17.65■□□□□ 0.42
SNX29P1-201ENST00000548357 SKAP1Q86WV1 359 aa17.65■□□□□ 0.42
SNX29P1-201ENST00000548357 IGDCC4Q8TDY8 1250 aa17.65■□□□□ 0.42
SNX29P1-201ENST00000548357 ATXN2LQ8WWM7 1075 aaKnown RBP17.65■□□□□ 0.42
SNX29P1-201ENST00000548357 ARNTL2Q8WYA1 636 aa17.65■□□□□ 0.42
SNX29P1-201ENST00000548357 C16orf70Q9BSU1 422 aa17.65■□□□□ 0.42
SNX29P1-201ENST00000548357 FRMPD4Q14CM0 1322 aa17.65■□□□□ 0.42
SNX29P1-201ENST00000548357 KIAA1671Q9BY89 1806 aa17.64■□□□□ 0.41
SNX29P1-201ENST00000548357 C7orf31Q8N865 590 aa17.64■□□□□ 0.41
SNX29P1-201ENST00000548357 PHOSPHO2Q8TCD6 241 aa17.64■□□□□ 0.41
SNX29P1-201ENST00000548357 ADAMTS19Q8TE59 1207 aa17.64■□□□□ 0.41
SNX29P1-201ENST00000548357 SYMPKQ92797 1274 aaKnown RBP17.64■□□□□ 0.41
SNX29P1-201ENST00000548357 SPATA33Q96N06 139 aa17.64■□□□□ 0.41
SNX29P1-201ENST00000548357 LY9Q9HBG7 655 aa17.64■□□□□ 0.41
SNX29P1-201ENST00000548357 RBM8AQ9Y5S9 174 aaKnown RBP17.64■□□□□ 0.41
SNX29P1-201ENST00000548357 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
SNX29P1-201ENST00000548357 MYO7AQ13402 2215 aa17.64■□□□□ 0.41
SNX29P1-201ENST00000548357 WDR81Q562E7 1941 aa17.63■□□□□ 0.41
SNX29P1-201ENST00000548357 GCOM1H8Y6P7 765 aaPredicted RBP17.63■□□□□ 0.41
SNX29P1-201ENST00000548357 TNFRSF10AO00220 468 aa17.63■□□□□ 0.41
SNX29P1-201ENST00000548357 BAIAP3O94812 1187 aa17.63■□□□□ 0.41
SNX29P1-201ENST00000548357 POLR2MP0CAP2 368 aa17.63■□□□□ 0.41
SNX29P1-201ENST00000548357 KCNQ1P51787 676 aa17.63■□□□□ 0.41
SNX29P1-201ENST00000548357 TRDNQ13061 729 aa17.63■□□□□ 0.41
SNX29P1-201ENST00000548357 PTK7Q13308 1070 aa17.63■□□□□ 0.41
SNX29P1-201ENST00000548357 CCDC155Q8N6L0 562 aa17.63■□□□□ 0.41
SNX29P1-201ENST00000548357 NCOA7Q8NI08 942 aa17.63■□□□□ 0.41
SNX29P1-201ENST00000548357 MAP4K1Q92918 833 aa17.63■□□□□ 0.41
SNX29P1-201ENST00000548357 RALGAPA2Q2PPJ7 1873 aa17.63■□□□□ 0.41
SNX29P1-201ENST00000548357 PNMA6FA0A0J9YX94 578 aa17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 PLEKHA8P1O95397 391 aa17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 RXRAP19793 462 aa17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 CCND2P30279 289 aa17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 MRPS5P82675 430 aaKnown RBP17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 GRB10Q13322 594 aa17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 MKRN4PQ13434 485 aaPredicted RBP17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 CNKSR3Q6P9H4 555 aa17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 RALYLQ86SE5 291 aaKnown RBP17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 TRIM50Q86XT4 487 aa17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 RAB11FIP4Q86YS3 637 aa17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 CMTR1Q8N1G2 835 aaKnown RBP17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 GDPD5Q8WTR4 605 aa17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 RTEL1Q9NZ71 1219 aa17.62■□□□□ 0.41
SNX29P1-201ENST00000548357 TLL1O43897 1013 aa17.61■□□□□ 0.41
SNX29P1-201ENST00000548357 LGALS2P05162 132 aa17.61■□□□□ 0.41
SNX29P1-201ENST00000548357 POU3F3P20264 500 aaPredicted RBP17.61■□□□□ 0.41
SNX29P1-201ENST00000548357 HOXC8P31273 242 aa17.61■□□□□ 0.41
SNX29P1-201ENST00000548357 KCNJ6P48051 423 aa17.61■□□□□ 0.41
SNX29P1-201ENST00000548357 FAM117BQ6P1L5 589 aa17.61■□□□□ 0.41
SNX29P1-201ENST00000548357 USP17L6PQ6QN14 398 aa17.61■□□□□ 0.41
SNX29P1-201ENST00000548357 ZNF654Q8IZM8 581 aa17.61■□□□□ 0.41
SNX29P1-201ENST00000548357 RUFY2Q8WXA3 655 aa17.61■□□□□ 0.41
SNX29P1-201ENST00000548357 KATNAL1Q9BW62 490 aa17.61■□□□□ 0.41
SNX29P1-201ENST00000548357 MAP3K20Q9NYL2 800 aaKnown RBP17.61■□□□□ 0.41
SNX29P1-201ENST00000548357 RAPGEFL1Q9UHV5 662 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms