RNA–Protein interactions for RNA: ENST00000528699.1

SIPA1-204, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-204ENST00000528699 RXRAP19793 462 aa12.42□□□□□ -0.42
SIPA1-204ENST00000528699 PSEN2P49810 448 aa12.42□□□□□ -0.42
SIPA1-204ENST00000528699 GNAQP50148 359 aa12.42□□□□□ -0.42
SIPA1-204ENST00000528699 MRPS9P82933 396 aaKnown RBP12.42□□□□□ -0.42
SIPA1-204ENST00000528699 SP2Q02086 613 aa12.42□□□□□ -0.42
SIPA1-204ENST00000528699 RBL2Q08999 1139 aa12.42□□□□□ -0.42
SIPA1-204ENST00000528699 PTGISQ16647 500 aa12.42□□□□□ -0.42
SIPA1-204ENST00000528699 HSDL1Q3SXM5 330 aa12.42□□□□□ -0.42
SIPA1-204ENST00000528699 CELF3Q5SZQ8 465 aaKnown RBP12.42□□□□□ -0.42
SIPA1-204ENST00000528699 GDF6Q6KF10 455 aaPredicted RBP12.42□□□□□ -0.42
SIPA1-204ENST00000528699 NFXL1Q6ZNB6 911 aa12.42□□□□□ -0.42
SIPA1-204ENST00000528699 TMTC3Q6ZXV5 915 aa12.42□□□□□ -0.42
SIPA1-204ENST00000528699 DHX37Q8IY37 1157 aaKnown RBP12.42□□□□□ -0.42
SIPA1-204ENST00000528699 PIBF1Q8WXW3 757 aa12.42□□□□□ -0.42
SIPA1-204ENST00000528699 DHX38Q92620 1227 aaKnown RBP12.42□□□□□ -0.42
SIPA1-204ENST00000528699 ZFP91Q96JP5 570 aaPredicted RBP12.42□□□□□ -0.42
SIPA1-204ENST00000528699 INPP4AQ96PE3 977 aaPredicted RBP12.42□□□□□ -0.42
SIPA1-204ENST00000528699 LRRC2Q9BYS8 371 aa12.42□□□□□ -0.42
SIPA1-204ENST00000528699 ZNF576Q9H609 170 aa12.42□□□□□ -0.42
SIPA1-204ENST00000528699 GTF2IRD1Q9UHL9 959 aa12.42□□□□□ -0.42
SIPA1-204ENST00000528699 PPFIA4O75335 1185 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 STAM2O75886 525 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 IQCF3P0C7M6 154 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 ICAM3P32942 547 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 HSPA4P34932 840 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 CHMP4BP1P59074 171 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 SEMA3FQ13275 785 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 BFSP2Q13515 415 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 MFSD10Q14728 455 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 RAB30Q15771 203 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 USP17L6PQ6QN14 398 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 CMTR1Q8N1G2 835 aaKnown RBP12.41□□□□□ -0.42
SIPA1-204ENST00000528699 MAFAQ8NHW3 353 aaPredicted RBP12.41□□□□□ -0.42
SIPA1-204ENST00000528699 CAGE1Q8TC20 777 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 AFAP1L1Q8TED9 768 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 SPATA33Q96N06 139 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 NEK1Q96PY6 1258 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 KATNAL1Q9BW62 490 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 DOCK5Q9H7D0 1870 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 SEC63Q9UGP8 760 aaKnown RBP12.41□□□□□ -0.42
SIPA1-204ENST00000528699 NOD1Q9Y239 953 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 YBX2Q9Y2T7 364 aaKnown RBP12.41□□□□□ -0.42
SIPA1-204ENST00000528699 SLC12A7Q9Y666 1083 aa12.41□□□□□ -0.42
SIPA1-204ENST00000528699 EPB41L2O43491 1005 aaKnown RBP12.4□□□□□ -0.42
SIPA1-204ENST00000528699 KRT32Q14532 448 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 KIAA0753Q2KHM9 967 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 GNPTABQ3T906 1256 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 PCNX4Q63HM2 1172 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 APOA5Q6Q788 366 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 DHX32Q7L7V1 743 aaKnown RBP12.4□□□□□ -0.42
SIPA1-204ENST00000528699 DEFB128Q7Z7B8 93 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 RAB11FIP4Q86YS3 637 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.4□□□□□ -0.42
SIPA1-204ENST00000528699 CCDC155Q8N6L0 562 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 C7orf31Q8N865 590 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 FANCBQ8NB91 859 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 RETREG2Q8NC44 543 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 TCEANC2Q96MN5 208 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 C16orf70Q9BSU1 422 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 BCAS3Q9H6U6 928 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 HDAC6Q9UBN7 1215 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 SNX14Q9Y5W7 946 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 SLC4A7Q9Y6M7 1214 aa12.4□□□□□ -0.42
SIPA1-204ENST00000528699 TET1Q8NFU7 2136 aa12.4□□□□□ -0.43
SIPA1-204ENST00000528699 ZBBXA8MT70 800 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 SPATA31C2B4DYI2 1134 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 FIBPO43427 364 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 SORBS3O60504 671 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 HOXC8P31273 242 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 HIC1Q14526 733 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 GPNMBQ14956 572 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 TRIM71Q2Q1W2 868 aaKnown RBP12.39□□□□□ -0.43
SIPA1-204ENST00000528699 XRRA1Q6P2D8 792 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 METTL7BQ6UX53 244 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 MICU3Q86XE3 530 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 SMARCC2Q8TAQ2 1214 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 CUL5Q93034 780 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 ALG1Q9BT22 464 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 NKX2-4Q9H2Z4 354 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 MSRAQ9UJ68 235 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 BRPF3Q9ULD4 1205 aa12.39□□□□□ -0.43
SIPA1-204ENST00000528699 CNTNAP5Q8WYK1 1306 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 TRIP12Q14669 1992 aaPredicted RBP12.38□□□□□ -0.43
SIPA1-204ENST00000528699 hCG_1642624A0A1W2PR95 340 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 REC8O95072 547 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 LGALS2P05162 132 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 ACTN1P12814 892 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 SELPP16109 830 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 ATP2A2P16615 1042 aaKnown RBP12.38□□□□□ -0.43
SIPA1-204ENST00000528699 RABGGTBP53611 331 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 FUT2Q10981 343 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 PTK7Q13308 1070 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 NEDD9Q14511 834 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 TRAF7Q6Q0C0 670 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 LRRC8DQ7L1W4 858 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 FBXL16Q8N461 479 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 WNT8BQ93098 351 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 SLC9A7Q96T83 725 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 AGXT2Q9BYV1 514 aa12.38□□□□□ -0.43
SIPA1-204ENST00000528699 PSTPIP2Q9H939 334 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms