RNA–Protein interactions for RNA: ENST00000519529.1

CHMP7-206, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 690 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-206ENST00000519529 SPATA33Q96N06 139 aa23.16■■□□□ 1.3
CHMP7-206ENST00000519529 KATNAL1Q9BW62 490 aa23.16■■□□□ 1.3
CHMP7-206ENST00000519529 PITPNM1O00562 1244 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 PFKMP08237 780 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 TGFB3P10600 412 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 UBA1P22314 1058 aaKnown RBP23.15■■□□□ 1.3
CHMP7-206ENST00000519529 SP2Q02086 613 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 GRIN2CQ14957 1233 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 HSDL1Q3SXM5 330 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 GNPTABQ3T906 1256 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 USP17L6PQ6QN14 398 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 SYNE3Q6ZMZ3 975 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 SESTD1Q86VW0 696 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 MICU3Q86XE3 530 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 CCDC136Q96JN2 1154 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 NEK1Q96PY6 1258 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 MLXIPQ9HAP2 919 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 MSRAQ9UJ68 235 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 SLC4A7Q9Y6M7 1214 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 CHD9Q3L8U1 2897 aa23.15■■□□□ 1.3
CHMP7-206ENST00000519529 hCG_1642624A0A1W2PR95 340 aa23.14■■□□□ 1.29
CHMP7-206ENST00000519529 IQCF3P0C7M6 154 aa23.14■■□□□ 1.29
CHMP7-206ENST00000519529 MFSD10Q14728 455 aa23.14■■□□□ 1.29
CHMP7-206ENST00000519529 KIAA0753Q2KHM9 967 aa23.14■■□□□ 1.29
CHMP7-206ENST00000519529 CCDC155Q8N6L0 562 aa23.14■■□□□ 1.29
CHMP7-206ENST00000519529 FANCBQ8NB91 859 aa23.14■■□□□ 1.29
CHMP7-206ENST00000519529 MAFAQ8NHW3 353 aaPredicted RBP23.14■■□□□ 1.29
CHMP7-206ENST00000519529 VWCEQ96DN2 955 aa23.14■■□□□ 1.29
CHMP7-206ENST00000519529 RTEL1Q9NZ71 1219 aa23.14■■□□□ 1.29
CHMP7-206ENST00000519529 HDAC6Q9UBN7 1215 aa23.14■■□□□ 1.29
CHMP7-206ENST00000519529 FRMPD4Q14CM0 1322 aa23.13■■□□□ 1.29
CHMP7-206ENST00000519529 PPFIA4O75335 1185 aa23.13■■□□□ 1.29
CHMP7-206ENST00000519529 F2P00734 622 aa23.13■■□□□ 1.29
CHMP7-206ENST00000519529 RFC2P35250 354 aa23.13■■□□□ 1.29
CHMP7-206ENST00000519529 MRPS9P82933 396 aaKnown RBP23.13■■□□□ 1.29
CHMP7-206ENST00000519529 RAB30Q15771 203 aa23.13■■□□□ 1.29
CHMP7-206ENST00000519529 SGMS1Q86VZ5 419 aa23.13■■□□□ 1.29
CHMP7-206ENST00000519529 TCEANC2Q96MN5 208 aa23.13■■□□□ 1.29
CHMP7-206ENST00000519529 FTOQ9C0B1 505 aaKnown RBP eCLIP23.13■■□□□ 1.29
CHMP7-206ENST00000519529 GTF2IRD1Q9UHL9 959 aa23.13■■□□□ 1.29
CHMP7-206ENST00000519529 MEIS2O14770 477 aa23.12■■□□□ 1.29
CHMP7-206ENST00000519529 STAM2O75886 525 aa23.12■■□□□ 1.29
CHMP7-206ENST00000519529 ACTN1P12814 892 aa23.12■■□□□ 1.29
CHMP7-206ENST00000519529 TMTC3Q6ZXV5 915 aa23.12■■□□□ 1.29
CHMP7-206ENST00000519529 CAGE1Q8TC20 777 aa23.12■■□□□ 1.29
CHMP7-206ENST00000519529 PIK3CDO00329 1044 aa23.11■■□□□ 1.29
CHMP7-206ENST00000519529 ADCK5Q3MIX3 580 aa23.11■■□□□ 1.29
CHMP7-206ENST00000519529 RASEFQ8IZ41 740 aa23.11■■□□□ 1.29
CHMP7-206ENST00000519529 INPP4AQ96PE3 977 aaPredicted RBP23.11■■□□□ 1.29
CHMP7-206ENST00000519529 CTAGE1Q96RT6 745 aa23.11■■□□□ 1.29
CHMP7-206ENST00000519529 NKX2-4Q9H2Z4 354 aa23.11■■□□□ 1.29
CHMP7-206ENST00000519529 BCAS3Q9H6U6 928 aa23.11■■□□□ 1.29
CHMP7-206ENST00000519529 PSTPIP2Q9H939 334 aa23.11■■□□□ 1.29
CHMP7-206ENST00000519529 HAS3O00219 553 aa23.1■■□□□ 1.29
CHMP7-206ENST00000519529 DLL1O00548 723 aa23.1■■□□□ 1.29
CHMP7-206ENST00000519529 NOP56O00567 594 aaKnown RBP23.1■■□□□ 1.29
CHMP7-206ENST00000519529 HOXD8P13378 290 aaPredicted RBP23.1■■□□□ 1.29
CHMP7-206ENST00000519529 ATP2A2P16615 1042 aaKnown RBP23.1■■□□□ 1.29
CHMP7-206ENST00000519529 RABGGTBP53611 331 aa23.1■■□□□ 1.29
CHMP7-206ENST00000519529 APOA5Q6Q788 366 aa23.1■■□□□ 1.29
CHMP7-206ENST00000519529 DHX32Q7L7V1 743 aaKnown RBP23.1■■□□□ 1.29
CHMP7-206ENST00000519529 AFAP1L1Q8TED9 768 aa23.1■■□□□ 1.29
CHMP7-206ENST00000519529 SLC28A3Q9HAS3 691 aa23.1■■□□□ 1.29
CHMP7-206ENST00000519529 PTPRSQ13332 1948 aa23.1■■□□□ 1.29
CHMP7-206ENST00000519529 CHD7Q9P2D1 2997 aa23.09■■□□□ 1.29
CHMP7-206ENST00000519529 SPATA31C2B4DYI2 1134 aa23.09■■□□□ 1.29
CHMP7-206ENST00000519529 FIBPO43427 364 aa23.09■■□□□ 1.29
CHMP7-206ENST00000519529 ICAM3P32942 547 aa23.09■■□□□ 1.29
CHMP7-206ENST00000519529 EXOSC10Q01780 885 aaKnown RBP23.09■■□□□ 1.29
CHMP7-206ENST00000519529 NEDD9Q14511 834 aa23.09■■□□□ 1.29
CHMP7-206ENST00000519529 KRT32Q14532 448 aa23.09■■□□□ 1.29
CHMP7-206ENST00000519529 PCNX4Q63HM2 1172 aa23.09■■□□□ 1.29
CHMP7-206ENST00000519529 CYFIP1Q7L576 1253 aa23.09■■□□□ 1.29
CHMP7-206ENST00000519529 HEATR3Q7Z4Q2 680 aa23.09■■□□□ 1.29
CHMP7-206ENST00000519529 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.09■■□□□ 1.29
CHMP7-206ENST00000519529 DHX38Q92620 1227 aaKnown RBP23.09■■□□□ 1.29
CHMP7-206ENST00000519529 YBX2Q9Y2T7 364 aaKnown RBP23.09■■□□□ 1.29
CHMP7-206ENST00000519529 CUL9Q8IWT3 2517 aa23.09■■□□□ 1.29
CHMP7-206ENST00000519529 SELPP16109 830 aa23.08■■□□□ 1.29
CHMP7-206ENST00000519529 ZNF200P98182 395 aaPredicted RBP23.08■■□□□ 1.29
CHMP7-206ENST00000519529 SEMA3FQ13275 785 aa23.08■■□□□ 1.29
CHMP7-206ENST00000519529 UBE2SQ16763 222 aa23.08■■□□□ 1.29
CHMP7-206ENST00000519529 TSGA10IPQ3SY00 556 aa23.08■■□□□ 1.29
CHMP7-206ENST00000519529 LRRC8DQ7L1W4 858 aa23.08■■□□□ 1.29
CHMP7-206ENST00000519529 GAS2L1Q99501 681 aaPredicted RBP23.08■■□□□ 1.29
CHMP7-206ENST00000519529 C16orf70Q9BSU1 422 aa23.08■■□□□ 1.29
CHMP7-206ENST00000519529 PRDM12Q9H4Q4 367 aa23.08■■□□□ 1.29
CHMP7-206ENST00000519529 RBM28Q9NW13 759 aaKnown RBP23.08■■□□□ 1.29
CHMP7-206ENST00000519529 ZBTB43O43298 467 aa23.07■■□□□ 1.28
CHMP7-206ENST00000519529 CKBP12277 381 aa23.07■■□□□ 1.28
CHMP7-206ENST00000519529 PTK7Q13308 1070 aa23.07■■□□□ 1.28
CHMP7-206ENST00000519529 RTN1Q16799 776 aa23.07■■□□□ 1.28
CHMP7-206ENST00000519529 XRRA1Q6P2D8 792 aa23.07■■□□□ 1.28
CHMP7-206ENST00000519529 METTL7BQ6UX53 244 aa23.07■■□□□ 1.28
CHMP7-206ENST00000519529 NLRX1Q86UT6 975 aa23.07■■□□□ 1.28
CHMP7-206ENST00000519529 BRPF3Q9ULD4 1205 aa23.07■■□□□ 1.28
CHMP7-206ENST00000519529 NAP1L2Q9ULW6 460 aaPredicted RBP23.07■■□□□ 1.28
CHMP7-206ENST00000519529 SPDYE3A6NKU9 549 aa23.06■■□□□ 1.28
CHMP7-206ENST00000519529 H3BRB1 525 aa23.06■■□□□ 1.28
CHMP7-206ENST00000519529 LGALS2P05162 132 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms