RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 SAMD3Q8N6K7 520 aa26.18■■□□□ 1.78
CDC42SE2-207ENST00000504701 RRP36Q96EU6 259 aaKnown RBP26.18■■□□□ 1.78
CDC42SE2-207ENST00000504701 RTEL1Q9NZ71 1219 aa26.18■■□□□ 1.78
CDC42SE2-207ENST00000504701 F2P00734 622 aa26.17■■□□□ 1.78
CDC42SE2-207ENST00000504701 KIF5BP33176 963 aa26.17■■□□□ 1.78
CDC42SE2-207ENST00000504701 MFSD10Q14728 455 aa26.17■■□□□ 1.78
CDC42SE2-207ENST00000504701 ADCK5Q3MIX3 580 aa26.17■■□□□ 1.78
CDC42SE2-207ENST00000504701 RASEFQ8IZ41 740 aa26.17■■□□□ 1.78
CDC42SE2-207ENST00000504701 RPUSD2Q8IZ73 545 aaKnown RBP26.17■■□□□ 1.78
CDC42SE2-207ENST00000504701 WNT8BQ93098 351 aa26.17■■□□□ 1.78
CDC42SE2-207ENST00000504701 SPATA33Q96N06 139 aa26.17■■□□□ 1.78
CDC42SE2-207ENST00000504701 MTA3Q9BTC8 594 aa26.17■■□□□ 1.78
CDC42SE2-207ENST00000504701 NOD1Q9Y239 953 aa26.17■■□□□ 1.78
CDC42SE2-207ENST00000504701 CHD7Q9P2D1 2997 aa26.16■■□□□ 1.78
CDC42SE2-207ENST00000504701 HAS3O00219 553 aa26.16■■□□□ 1.78
CDC42SE2-207ENST00000504701 MEIS2O14770 477 aa26.16■■□□□ 1.78
CDC42SE2-207ENST00000504701 HOXD8P13378 290 aaPredicted RBP26.16■■□□□ 1.78
CDC42SE2-207ENST00000504701 GPNMBQ14956 572 aa26.16■■□□□ 1.78
CDC42SE2-207ENST00000504701 KIAA0753Q2KHM9 967 aa26.16■■□□□ 1.78
CDC42SE2-207ENST00000504701 SESTD1Q86VW0 696 aa26.16■■□□□ 1.78
CDC42SE2-207ENST00000504701 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.16■■□□□ 1.78
CDC42SE2-207ENST00000504701 USP38Q8NB14 1042 aa26.16■■□□□ 1.78
CDC42SE2-207ENST00000504701 PRDM12Q9H4Q4 367 aa26.16■■□□□ 1.78
CDC42SE2-207ENST00000504701 GTF2IRD1Q9UHL9 959 aa26.16■■□□□ 1.78
CDC42SE2-207ENST00000504701 PITPNM1O00562 1244 aa26.15■■□□□ 1.78
CDC42SE2-207ENST00000504701 LIFRP42702 1097 aa26.15■■□□□ 1.78
CDC42SE2-207ENST00000504701 TRAF1Q13077 416 aa26.15■■□□□ 1.78
CDC42SE2-207ENST00000504701 MICU3Q86XE3 530 aa26.15■■□□□ 1.78
CDC42SE2-207ENST00000504701 SLC4A7Q9Y6M7 1214 aa26.15■■□□□ 1.78
CDC42SE2-207ENST00000504701 TCTN1Q2MV58 587 aa26.14■■□□□ 1.78
CDC42SE2-207ENST00000504701 RETREG2Q8NC44 543 aa26.14■■□□□ 1.78
CDC42SE2-207ENST00000504701 MTIF3Q9H2K0 278 aaKnown RBP26.14■■□□□ 1.78
CDC42SE2-207ENST00000504701 SLC12A7Q9Y666 1083 aa26.14■■□□□ 1.78
CDC42SE2-207ENST00000504701 MYO9BQ13459 2157 aa26.13■■□□□ 1.77
CDC42SE2-207ENST00000504701 UBE2SQ16763 222 aa26.13■■□□□ 1.77
CDC42SE2-207ENST00000504701 TMTC3Q6ZXV5 915 aa26.13■■□□□ 1.77
CDC42SE2-207ENST00000504701 TMTC2Q8N394 836 aa26.13■■□□□ 1.77
CDC42SE2-207ENST00000504701 C7orf31Q8N865 590 aa26.13■■□□□ 1.77
CDC42SE2-207ENST00000504701 SMARCC2Q8TAQ2 1214 aa26.13■■□□□ 1.77
CDC42SE2-207ENST00000504701 INPP4AQ96PE3 977 aaPredicted RBP26.13■■□□□ 1.77
CDC42SE2-207ENST00000504701 C16orf70Q9BSU1 422 aa26.13■■□□□ 1.77
CDC42SE2-207ENST00000504701 SEC63Q9UGP8 760 aaKnown RBP26.13■■□□□ 1.77
CDC42SE2-207ENST00000504701 MSRAQ9UJ68 235 aa26.13■■□□□ 1.77
CDC42SE2-207ENST00000504701 BRPF3Q9ULD4 1205 aa26.13■■□□□ 1.77
CDC42SE2-207ENST00000504701 SMARCA1P28370 1054 aa26.12■■□□□ 1.77
CDC42SE2-207ENST00000504701 BFSP2Q13515 415 aa26.12■■□□□ 1.77
CDC42SE2-207ENST00000504701 RAB30Q15771 203 aa26.12■■□□□ 1.77
CDC42SE2-207ENST00000504701 KCNV1Q6PIU1 500 aa26.12■■□□□ 1.77
CDC42SE2-207ENST00000504701 SGMS1Q86VZ5 419 aa26.12■■□□□ 1.77
CDC42SE2-207ENST00000504701 FANCBQ8NB91 859 aa26.12■■□□□ 1.77
CDC42SE2-207ENST00000504701 NEK1Q96PY6 1258 aa26.12■■□□□ 1.77
CDC42SE2-207ENST00000504701 LZTS2Q9BRK4 669 aa26.12■■□□□ 1.77
CDC42SE2-207ENST00000504701 FTOQ9C0B1 505 aaKnown RBP eCLIP26.12■■□□□ 1.77
CDC42SE2-207ENST00000504701 MLXIPQ9HAP2 919 aa26.12■■□□□ 1.77
CDC42SE2-207ENST00000504701 CDC45O75419 566 aa26.11■■□□□ 1.77
CDC42SE2-207ENST00000504701 PFKMP08237 780 aa26.11■■□□□ 1.77
CDC42SE2-207ENST00000504701 CPA1P15085 419 aa26.11■■□□□ 1.77
CDC42SE2-207ENST00000504701 ATP2A2P16615 1042 aaKnown RBP26.11■■□□□ 1.77
CDC42SE2-207ENST00000504701 GNAQP50148 359 aa26.11■■□□□ 1.77
CDC42SE2-207ENST00000504701 EXOSC10Q01780 885 aaKnown RBP26.11■■□□□ 1.77
CDC42SE2-207ENST00000504701 ADGRE1Q14246 886 aa26.11■■□□□ 1.77
CDC42SE2-207ENST00000504701 CYFIP1Q7L576 1253 aa26.11■■□□□ 1.77
CDC42SE2-207ENST00000504701 KATNAL1Q9BW62 490 aa26.11■■□□□ 1.77
CDC42SE2-207ENST00000504701 VCANP13611 3396 aa26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 SPATA31C2B4DYI2 1134 aa26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 PIK3CDO00329 1044 aa26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 PPFIA4O75335 1185 aa26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 ARHGEF15O94989 841 aa26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 TGFB3P10600 412 aa26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 CKBP12277 381 aa26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 ICAM3P32942 547 aa26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 RFC2P35250 354 aa26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 TRIM71Q2Q1W2 868 aaKnown RBP26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 TRAF7Q6Q0C0 670 aa26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 APOA5Q6Q788 366 aa26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 TMCO2Q7Z6W1 182 aaPredicted RBP26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 TRIM50Q86XT4 487 aa26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 CNTNAP5Q8WYK1 1306 aa26.1■■□□□ 1.77
CDC42SE2-207ENST00000504701 NBNO60934 754 aa26.09■■□□□ 1.77
CDC42SE2-207ENST00000504701 LGALS2P05162 132 aa26.09■■□□□ 1.77
CDC42SE2-207ENST00000504701 CALM1P0DP23 149 aa26.09■■□□□ 1.77
CDC42SE2-207ENST00000504701 CALM2P0DP24 149 aa26.09■■□□□ 1.77
CDC42SE2-207ENST00000504701 CALM3P0DP25 149 aa26.09■■□□□ 1.77
CDC42SE2-207ENST00000504701 SP4Q02446 784 aa26.09■■□□□ 1.77
CDC42SE2-207ENST00000504701 PCNX4Q63HM2 1172 aa26.09■■□□□ 1.77
CDC42SE2-207ENST00000504701 LRRC8DQ7L1W4 858 aa26.09■■□□□ 1.77
CDC42SE2-207ENST00000504701 CAGE1Q8TC20 777 aa26.09■■□□□ 1.77
CDC42SE2-207ENST00000504701 AFAP1L1Q8TED9 768 aa26.09■■□□□ 1.77
CDC42SE2-207ENST00000504701 CUL5Q93034 780 aa26.09■■□□□ 1.77
CDC42SE2-207ENST00000504701 PRDM6Q9NQX0 595 aa26.09■■□□□ 1.77
CDC42SE2-207ENST00000504701 SELPP16109 830 aa26.08■■□□□ 1.77
CDC42SE2-207ENST00000504701 MBTPS1Q14703 1052 aa26.08■■□□□ 1.77
CDC42SE2-207ENST00000504701 GNPTABQ3T906 1256 aa26.08■■□□□ 1.77
CDC42SE2-207ENST00000504701 RNF20Q5VTR2 975 aa26.08■■□□□ 1.77
CDC42SE2-207ENST00000504701 TYW1BQ6NUM6 668 aa26.08■■□□□ 1.77
CDC42SE2-207ENST00000504701 HEATR3Q7Z4Q2 680 aa26.08■■□□□ 1.77
CDC42SE2-207ENST00000504701 COL25A1Q9BXS0 654 aaPredicted RBP26.08■■□□□ 1.77
CDC42SE2-207ENST00000504701 PSTPIP2Q9H939 334 aa26.08■■□□□ 1.77
CDC42SE2-207ENST00000504701 SLC28A3Q9HAS3 691 aa26.08■■□□□ 1.77
CDC42SE2-207ENST00000504701 FIBPO43427 364 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms