RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 SLC9A7Q96T83 725 aa21.52■■□□□ 1.04
PRKCB-209ENST00000498058 U3KPZ7 1027 aaPredicted RBP21.52■■□□□ 1.04
PRKCB-209ENST00000498058 DOCK5Q9H7D0 1870 aa21.52■■□□□ 1.03
PRKCB-209ENST00000498058 SGSM2O43147 1006 aa21.51■■□□□ 1.03
PRKCB-209ENST00000498058 RBL2Q08999 1139 aa21.51■■□□□ 1.03
PRKCB-209ENST00000498058 TRDNQ13061 729 aa21.51■■□□□ 1.03
PRKCB-209ENST00000498058 LAMC2Q13753 1193 aa21.51■■□□□ 1.03
PRKCB-209ENST00000498058 KIAA0753Q2KHM9 967 aa21.51■■□□□ 1.03
PRKCB-209ENST00000498058 CELF3Q5SZQ8 465 aaKnown RBP21.51■■□□□ 1.03
PRKCB-209ENST00000498058 HERC6Q8IVU3 1022 aa21.51■■□□□ 1.03
PRKCB-209ENST00000498058 CAGE1Q8TC20 777 aa21.51■■□□□ 1.03
PRKCB-209ENST00000498058 PHOSPHO2Q8TCD6 241 aa21.51■■□□□ 1.03
PRKCB-209ENST00000498058 AFAP1L1Q8TED9 768 aa21.51■■□□□ 1.03
PRKCB-209ENST00000498058 SYMPKQ92797 1274 aaKnown RBP21.51■■□□□ 1.03
PRKCB-209ENST00000498058 THEGQ9P2T0 379 aa21.51■■□□□ 1.03
PRKCB-209ENST00000498058 MUC3AQ02505 3323 aa21.5■■□□□ 1.03
PRKCB-209ENST00000498058 CKBP12277 381 aa21.5■■□□□ 1.03
PRKCB-209ENST00000498058 SELPP16109 830 aa21.5■■□□□ 1.03
PRKCB-209ENST00000498058 TAP1Q03518 808 aa21.5■■□□□ 1.03
PRKCB-209ENST00000498058 KRT40Q6A162 431 aa21.5■■□□□ 1.03
PRKCB-209ENST00000498058 LRRC8DQ7L1W4 858 aa21.5■■□□□ 1.03
PRKCB-209ENST00000498058 FCHSD1Q86WN1 690 aa21.5■■□□□ 1.03
PRKCB-209ENST00000498058 MB21D2Q8IYB1 491 aaPredicted RBP21.5■■□□□ 1.03
PRKCB-209ENST00000498058 IGDCC4Q8TDY8 1250 aa21.5■■□□□ 1.03
PRKCB-209ENST00000498058 ATXN2LQ8WWM7 1075 aaKnown RBP21.5■■□□□ 1.03
PRKCB-209ENST00000498058 ASB2Q96Q27 587 aa21.5■■□□□ 1.03
PRKCB-209ENST00000498058 MAP3K20Q9NYL2 800 aaKnown RBP21.5■■□□□ 1.03
PRKCB-209ENST00000498058 GGPS1O95749 300 aa21.49■■□□□ 1.03
PRKCB-209ENST00000498058 CXCL10P02778 98 aa21.49■■□□□ 1.03
PRKCB-209ENST00000498058 UBA1P22314 1058 aaKnown RBP21.49■■□□□ 1.03
PRKCB-209ENST00000498058 WDR5P61964 334 aaKnown RBP21.49■■□□□ 1.03
PRKCB-209ENST00000498058 DEFB103AP81534 67 aa21.49■■□□□ 1.03
PRKCB-209ENST00000498058 MBTPS1Q14703 1052 aa21.49■■□□□ 1.03
PRKCB-209ENST00000498058 WTAPQ15007 396 aa21.49■■□□□ 1.03
PRKCB-209ENST00000498058 MICALL1Q8N3F8 863 aa21.49■■□□□ 1.03
PRKCB-209ENST00000498058 C7orf31Q8N865 590 aa21.49■■□□□ 1.03
PRKCB-209ENST00000498058 NCOA7Q8NI08 942 aa21.49■■□□□ 1.03
PRKCB-209ENST00000498058 RUFY2Q8WXA3 655 aa21.49■■□□□ 1.03
PRKCB-209ENST00000498058 PIBF1Q8WXW3 757 aa21.49■■□□□ 1.03
PRKCB-209ENST00000498058 MAP4K1Q92918 833 aa21.49■■□□□ 1.03
PRKCB-209ENST00000498058 TCF20Q9UGU0 1960 aaKnown RBP21.48■■□□□ 1.03
PRKCB-209ENST00000498058 PNMA6FA0A0J9YX94 578 aa21.48■■□□□ 1.03
PRKCB-209ENST00000498058 LCHNA4D1U4 455 aa21.48■■□□□ 1.03
PRKCB-209ENST00000498058 GCOM1H8Y6P7 765 aaPredicted RBP21.48■■□□□ 1.03
PRKCB-209ENST00000498058 POLR2MP0CAP2 368 aa21.48■■□□□ 1.03
PRKCB-209ENST00000498058 MRPS9P82933 396 aaKnown RBP21.48■■□□□ 1.03
PRKCB-209ENST00000498058 SAMD3Q8N6K7 520 aa21.48■■□□□ 1.03
PRKCB-209ENST00000498058 SPATA33Q96N06 139 aa21.48■■□□□ 1.03
PRKCB-209ENST00000498058 C16orf70Q9BSU1 422 aa21.48■■□□□ 1.03
PRKCB-209ENST00000498058 MYL10Q9BUA6 226 aa21.48■■□□□ 1.03
PRKCB-209ENST00000498058 TELO2Q9Y4R8 837 aa21.48■■□□□ 1.03
PRKCB-209ENST00000498058 MTCH2Q9Y6C9 303 aa21.48■■□□□ 1.03
PRKCB-209ENST00000498058 BAIAP3O94812 1187 aa21.47■■□□□ 1.03
PRKCB-209ENST00000498058 SEMA3FQ13275 785 aa21.47■■□□□ 1.03
PRKCB-209ENST00000498058 ZNF618Q5T7W0 954 aa21.47■■□□□ 1.03
PRKCB-209ENST00000498058 RALYLQ86SE5 291 aaKnown RBP21.47■■□□□ 1.03
PRKCB-209ENST00000498058 CCDC155Q8N6L0 562 aa21.47■■□□□ 1.03
PRKCB-209ENST00000498058 RBM8AQ9Y5S9 174 aaKnown RBP21.47■■□□□ 1.03
PRKCB-209ENST00000498058 FRMPD4Q14CM0 1322 aa21.47■■□□□ 1.03
PRKCB-209ENST00000498058 PPFIA4O75335 1185 aa21.46■■□□□ 1.03
PRKCB-209ENST00000498058 POU3F3P20264 500 aaPredicted RBP21.46■■□□□ 1.03
PRKCB-209ENST00000498058 CCND2P30279 289 aa21.46■■□□□ 1.03
PRKCB-209ENST00000498058 PTK7Q13308 1070 aa21.46■■□□□ 1.03
PRKCB-209ENST00000498058 ARNTL2Q8WYA1 636 aa21.46■■□□□ 1.03
PRKCB-209ENST00000498058 KATNAL1Q9BW62 490 aa21.46■■□□□ 1.03
PRKCB-209ENST00000498058 LY9Q9HBG7 655 aa21.46■■□□□ 1.03
PRKCB-209ENST00000498058 COL4A4P53420 1690 aaPredicted RBP21.45■■□□□ 1.02
PRKCB-209ENST00000498058 ERICH2A1L162 156 aa21.45■■□□□ 1.02
PRKCB-209ENST00000498058 MRPS5P82675 430 aaKnown RBP21.45■■□□□ 1.02
PRKCB-209ENST00000498058 TFF2Q03403 129 aa21.45■■□□□ 1.02
PRKCB-209ENST00000498058 CNKSR3Q6P9H4 555 aa21.45■■□□□ 1.02
PRKCB-209ENST00000498058 KCNV1Q6PIU1 500 aa21.45■■□□□ 1.02
PRKCB-209ENST00000498058 OSBPL7Q9BZF2 842 aa21.45■■□□□ 1.02
PRKCB-209ENST00000498058 TNFRSF10AO00220 468 aa21.44■■□□□ 1.02
PRKCB-209ENST00000498058 TLL1O43897 1013 aa21.44■■□□□ 1.02
PRKCB-209ENST00000498058 LPXNO60711 386 aa21.44■■□□□ 1.02
PRKCB-209ENST00000498058 TGFB3P10600 412 aa21.44■■□□□ 1.02
PRKCB-209ENST00000498058 ADAMTS19Q8TE59 1207 aa21.44■■□□□ 1.02
PRKCB-209ENST00000498058 RTEL1Q9NZ71 1219 aa21.44■■□□□ 1.02
PRKCB-209ENST00000498058 XIRP2A4UGR9 3374 aa21.44■■□□□ 1.02
PRKCB-209ENST00000498058 HOXC8P31273 242 aa21.43■■□□□ 1.02
PRKCB-209ENST00000498058 KCNJ6P48051 423 aa21.43■■□□□ 1.02
PRKCB-209ENST00000498058 GRB10Q13322 594 aa21.43■■□□□ 1.02
PRKCB-209ENST00000498058 USP17L6PQ6QN14 398 aa21.43■■□□□ 1.02
PRKCB-209ENST00000498058 CATIPQ7Z7H3 387 aa21.43■■□□□ 1.02
PRKCB-209ENST00000498058 ZNF654Q8IZM8 581 aa21.43■■□□□ 1.02
PRKCB-209ENST00000498058 INPP4AQ96PE3 977 aaPredicted RBP21.43■■□□□ 1.02
PRKCB-209ENST00000498058 MLXIPQ9HAP2 919 aa21.43■■□□□ 1.02
PRKCB-209ENST00000498058 MICAL3Q7RTP6 2002 aa21.43■■□□□ 1.02
PRKCB-209ENST00000498058 SPATA31C2B4DYI2 1134 aa21.42■■□□□ 1.02
PRKCB-209ENST00000498058 KIF28PB7ZC32 967 aa21.42■■□□□ 1.02
PRKCB-209ENST00000498058 PLEKHA8P1O95397 391 aa21.42■■□□□ 1.02
PRKCB-209ENST00000498058 LGALS2P05162 132 aa21.42■■□□□ 1.02
PRKCB-209ENST00000498058 ICAM3P32942 547 aa21.42■■□□□ 1.02
PRKCB-209ENST00000498058 MKRN4PQ13434 485 aaPredicted RBP21.42■■□□□ 1.02
PRKCB-209ENST00000498058 SART3Q15020 963 aaKnown RBP21.42■■□□□ 1.02
PRKCB-209ENST00000498058 SERINC5Q86VE9 423 aa21.42■■□□□ 1.02
PRKCB-209ENST00000498058 NECAB3Q96P71 396 aaPredicted RBP21.42■■□□□ 1.02
PRKCB-209ENST00000498058 LSG1Q9H089 658 aaKnown RBP21.42■■□□□ 1.02
PRKCB-209ENST00000498058 MEIS2O14770 477 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms