RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CASTP20810 708 aaKnown RBP16.49■□□□□ 0.23
VTI1A-209ENST00000496445 MRPS9P82933 396 aaKnown RBP16.49■□□□□ 0.23
VTI1A-209ENST00000496445 GRIN2CQ14957 1233 aa16.49■□□□□ 0.23
VTI1A-209ENST00000496445 HSDL1Q3SXM5 330 aa16.49■□□□□ 0.23
VTI1A-209ENST00000496445 CELF3Q5SZQ8 465 aaKnown RBP16.49■□□□□ 0.23
VTI1A-209ENST00000496445 USP17L6PQ6QN14 398 aa16.49■□□□□ 0.23
VTI1A-209ENST00000496445 SGMS1Q86VZ5 419 aa16.49■□□□□ 0.23
VTI1A-209ENST00000496445 DHX37Q8IY37 1157 aaKnown RBP16.49■□□□□ 0.23
VTI1A-209ENST00000496445 TMTC2Q8N394 836 aa16.49■□□□□ 0.23
VTI1A-209ENST00000496445 CDC45O75419 566 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 IQCF3P0C7M6 154 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 PSEN2P49810 448 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 SEMA3FQ13275 785 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 PTGISQ16647 500 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 ADCK5Q3MIX3 580 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 KCNV1Q6PIU1 500 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 TMTC3Q6ZXV5 915 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 DEFB128Q7Z7B8 93 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 RASEFQ8IZ41 740 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 RPUSD2Q8IZ73 545 aaKnown RBP16.48■□□□□ 0.23
VTI1A-209ENST00000496445 DHX38Q92620 1227 aaKnown RBP16.48■□□□□ 0.23
VTI1A-209ENST00000496445 INPP4AQ96PE3 977 aaPredicted RBP16.48■□□□□ 0.23
VTI1A-209ENST00000496445 MTIF3Q9H2K0 278 aaKnown RBP16.48■□□□□ 0.23
VTI1A-209ENST00000496445 ZNF576Q9H609 170 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 BCAS3Q9H6U6 928 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 HDAC6Q9UBN7 1215 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 SEC63Q9UGP8 760 aaKnown RBP16.48■□□□□ 0.23
VTI1A-209ENST00000496445 GTF2IRD1Q9UHL9 959 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 SLC12A7Q9Y666 1083 aa16.48■□□□□ 0.23
VTI1A-209ENST00000496445 hCG_1642624A0A1W2PR95 340 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 PIK3CDO00329 1044 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 PFKMP08237 780 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 CALM1P0DP23 149 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 CALM2P0DP24 149 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 CALM3P0DP25 149 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 FOSL2P15408 326 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 GNAQP50148 359 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 MFSD10Q14728 455 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 MICU3Q86XE3 530 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 MAFAQ8NHW3 353 aaPredicted RBP16.47■□□□□ 0.23
VTI1A-209ENST00000496445 TCEANC2Q96MN5 208 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 SPATA33Q96N06 139 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 ALG1Q9BT22 464 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 KATNAL1Q9BW62 490 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 NOD1Q9Y239 953 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 YBX2Q9Y2T7 364 aaKnown RBP16.47■□□□□ 0.23
VTI1A-209ENST00000496445 MUC3AQ02505 3323 aa16.47■□□□□ 0.23
VTI1A-209ENST00000496445 CNTNAP5Q8WYK1 1306 aa16.46■□□□□ 0.23
VTI1A-209ENST00000496445 RBAK-RBAKDNI3L0D1 243 aa16.46■□□□□ 0.23
VTI1A-209ENST00000496445 TGFB3P10600 412 aa16.46■□□□□ 0.23
VTI1A-209ENST00000496445 ICAM3P32942 547 aa16.46■□□□□ 0.23
VTI1A-209ENST00000496445 RFC2P35250 354 aa16.46■□□□□ 0.23
VTI1A-209ENST00000496445 EXOSC10Q01780 885 aaKnown RBP16.46■□□□□ 0.23
VTI1A-209ENST00000496445 BFSP2Q13515 415 aa16.46■□□□□ 0.23
VTI1A-209ENST00000496445 HIC1Q14526 733 aa16.46■□□□□ 0.23
VTI1A-209ENST00000496445 KIAA0753Q2KHM9 967 aa16.46■□□□□ 0.23
VTI1A-209ENST00000496445 RNF20Q5VTR2 975 aa16.46■□□□□ 0.23
VTI1A-209ENST00000496445 APOA5Q6Q788 366 aa16.46■□□□□ 0.23
VTI1A-209ENST00000496445 FANCBQ8NB91 859 aa16.46■□□□□ 0.23
VTI1A-209ENST00000496445 SMARCC2Q8TAQ2 1214 aa16.46■□□□□ 0.23
VTI1A-209ENST00000496445 CAGE1Q8TC20 777 aa16.46■□□□□ 0.23
VTI1A-209ENST00000496445 NEK1Q96PY6 1258 aa16.46■□□□□ 0.23
VTI1A-209ENST00000496445 ZBBXA8MT70 800 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 STAM2O75886 525 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 RABGGTBP53611 331 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 RBL2Q08999 1139 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 GPNMBQ14956 572 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 RAB30Q15771 203 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 TSGA10IPQ3SY00 556 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 GNPTABQ3T906 1256 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 PCNX4Q63HM2 1172 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 CCDC82Q8N4S0 544 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 C7orf31Q8N865 590 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 AFAP1L1Q8TED9 768 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 WNT8BQ93098 351 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 C16orf70Q9BSU1 422 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 NKX2-4Q9H2Z4 354 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 RTEL1Q9NZ71 1219 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 BRPF3Q9ULD4 1205 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 TELO2Q9Y4R8 837 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 SLC4A7Q9Y6M7 1214 aa16.45■□□□□ 0.22
VTI1A-209ENST00000496445 SPATA31C2B4DYI2 1134 aa16.44■□□□□ 0.22
VTI1A-209ENST00000496445 PPFIA4O75335 1185 aa16.44■□□□□ 0.22
VTI1A-209ENST00000496445 ZNF200P98182 395 aaPredicted RBP16.44■□□□□ 0.22
VTI1A-209ENST00000496445 UBE2SQ16763 222 aa16.44■□□□□ 0.22
VTI1A-209ENST00000496445 TRAF7Q6Q0C0 670 aa16.44■□□□□ 0.22
VTI1A-209ENST00000496445 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.44■□□□□ 0.22
VTI1A-209ENST00000496445 CCDC155Q8N6L0 562 aa16.44■□□□□ 0.22
VTI1A-209ENST00000496445 RETREG2Q8NC44 543 aa16.44■□□□□ 0.22
VTI1A-209ENST00000496445 CUL5Q93034 780 aa16.44■□□□□ 0.22
VTI1A-209ENST00000496445 MLXIPQ9HAP2 919 aa16.44■□□□□ 0.22
VTI1A-209ENST00000496445 MSRAQ9UJ68 235 aa16.44■□□□□ 0.22
VTI1A-209ENST00000496445 SIP14410 1827 aa16.43■□□□□ 0.22
VTI1A-209ENST00000496445 MYO9BQ13459 2157 aa16.43■□□□□ 0.22
VTI1A-209ENST00000496445 FIBPO43427 364 aa16.43■□□□□ 0.22
VTI1A-209ENST00000496445 LGALS2P05162 132 aa16.43■□□□□ 0.22
VTI1A-209ENST00000496445 MYOGP15173 224 aa16.43■□□□□ 0.22
VTI1A-209ENST00000496445 SELPP16109 830 aa16.43■□□□□ 0.22
VTI1A-209ENST00000496445 ATP2A2P16615 1042 aaKnown RBP16.43■□□□□ 0.22
VTI1A-209ENST00000496445 FUT2Q10981 343 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms