RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 MAMDC4Q6UXC1 1216 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 SEPT14Q6ZU15 432 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 SLAIN1Q8ND83 568 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 SCFD2Q8WU76 684 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 USP6NLQ92738 828 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 FAM20AQ96MK3 541 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 PURBQ96QR8 312 aaKnown RBP12.39□□□□□ -0.43
VARS2-210ENST00000490699 ZNF577Q9BSK1 485 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 JADE2Q9NQC1 790 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.39□□□□□ -0.43
VARS2-210ENST00000490699 NRBP1Q9UHY1 535 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 GJD2Q9UKL4 321 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 ZHX1Q9UKY1 873 aaPredicted RBP12.39□□□□□ -0.43
VARS2-210ENST00000490699 PCDHB6Q9Y5E3 794 aa12.39□□□□□ -0.43
VARS2-210ENST00000490699 ADAMTS3O15072 1205 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 ADCY3O60266 1144 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 HMGCRP04035 888 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 TGFB3P10600 412 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 ME1P48163 572 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 PTGDRQ13258 359 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 ARL6IP4Q66PJ3 421 aaKnown RBP12.38□□□□□ -0.43
VARS2-210ENST00000490699 FAM173BQ6P4H8 233 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 DTHD1Q6ZMT9 781 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 EEPD1Q7L9B9 569 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 IL31RAQ8NI17 732 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 NPLOC4Q8TAT6 608 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 MORC4Q8TE76 937 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 CRYGNQ8WXF5 182 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 FERMT2Q96AC1 680 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 INPP4AQ96PE3 977 aaPredicted RBP12.38□□□□□ -0.43
VARS2-210ENST00000490699 USP28Q96RU2 1077 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 WDR11Q9BZH6 1224 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.38□□□□□ -0.43
VARS2-210ENST00000490699 TBC1D22BQ9NU19 505 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 TFIP11Q9UBB9 837 aaKnown RBP12.38□□□□□ -0.43
VARS2-210ENST00000490699 UBIAD1Q9Y5Z9 338 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 STK24Q9Y6E0 443 aa12.38□□□□□ -0.43
VARS2-210ENST00000490699 LCTP09848 1927 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 FAM86B1E9PN63 330 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 IPO5O00410 1097 aaKnown RBP12.37□□□□□ -0.43
VARS2-210ENST00000490699 MEIS1O00470 390 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 SPTLC2O15270 562 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 GAS7O60861 476 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 FAM86B2P0C5J1 330 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 HSPA8P11142 646 aaKnown RBP12.37□□□□□ -0.43
VARS2-210ENST00000490699 PTMSP20962 102 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 CTGFP29279 349 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 TXLNAP40222 546 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 PRPHP41219 470 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 NASPP49321 788 aaPredicted RBP12.37□□□□□ -0.43
VARS2-210ENST00000490699 TOB1P50616 345 aaPredicted RBP12.37□□□□□ -0.43
VARS2-210ENST00000490699 MRPS9P82933 396 aaKnown RBP12.37□□□□□ -0.43
VARS2-210ENST00000490699 ACVR2BQ13705 512 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 NEDD9Q14511 834 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 NBR1Q14596 966 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 PKN2Q16513 984 aaKnown RBP12.37□□□□□ -0.43
VARS2-210ENST00000490699 LRCH2Q5VUJ6 765 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 OTOP1Q7RTM1 612 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 FBXO16Q8IX29 292 aaPredicted RBP12.37□□□□□ -0.43
VARS2-210ENST00000490699 ERMNQ8TAM6 284 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 PXYLP1Q8TE99 480 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 MBOAT7Q96N66 472 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 TEKT3Q9BXF9 490 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 KCNH7Q9NS40 1196 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 PCDHA12Q9UN75 941 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 GABRQQ9UN88 632 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 CLIC4Q9Y696 253 aa12.37□□□□□ -0.43
VARS2-210ENST00000490699 NKRFO15226 690 aaKnown RBP eCLIP12.36□□□□□ -0.43
VARS2-210ENST00000490699 FOXN1O15353 648 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 PPP6R2O75170 966 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 ITGB5P18084 799 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 ICAM3P32942 547 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 TXKP42681 527 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 LBX1P52954 281 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 ATP2C1P98194 919 aaPredicted RBP12.36□□□□□ -0.43
VARS2-210ENST00000490699 SLC39A14Q15043 492 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 BRDTQ58F21 947 aaPredicted RBP12.36□□□□□ -0.43
VARS2-210ENST00000490699 IQSEC1Q6DN90 963 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 CTU1Q7Z7A3 348 aaKnown RBP12.36□□□□□ -0.43
VARS2-210ENST00000490699 KRI1Q8N9T8 703 aaKnown RBP12.36□□□□□ -0.43
VARS2-210ENST00000490699 RASSF8Q8NHQ8 419 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 FGD4Q96M96 766 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 RIT2Q99578 217 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 MLXIPQ9HAP2 919 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 SPC25Q9HBM1 224 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 FAM184BQ9ULE4 1060 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 ZSWIM8A7E2V4 1837 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 ASTN1O14525 1302 aa12.36□□□□□ -0.43
VARS2-210ENST00000490699 KIAA1217Q5T5P2 1943 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 LRRC37A2A6NM11 1700 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 IGLV3-22A0A075B6J6 115 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 SPATA31C2B4DYI2 1134 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 NOP56O00567 594 aaKnown RBP12.35□□□□□ -0.43
VARS2-210ENST00000490699 SLC37A4O43826 429 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 TXNP10599 105 aaKnown RBP12.35□□□□□ -0.43
VARS2-210ENST00000490699 AKR1A1P14550 325 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 CNGA1P29973 690 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 GRK4P32298 578 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 CYP2C19P33261 490 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 KRT76Q01546 638 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms