RNA–Protein interactions for RNA: ENST00000489571.5

PGAP2-223, Transcript of post-GPI attachment to proteins 2, human

TSL 2

Gene PGAP2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-223	ENST00000489571	DEFB128	Q7Z7B8	93 aa		18.23	■□□□□ 0.51
PGAP2-223	ENST00000489571	RETREG2	Q8NC44	543 aa		18.23	■□□□□ 0.51
PGAP2-223	ENST00000489571	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	18.23	■□□□□ 0.51
PGAP2-223	ENST00000489571	CTAGE1	Q96RT6	745 aa		18.23	■□□□□ 0.51
PGAP2-223	ENST00000489571	KATNAL1	Q9BW62	490 aa		18.23	■□□□□ 0.51
PGAP2-223	ENST00000489571	SLC12A7	Q9Y666	1083 aa		18.23	■□□□□ 0.51
PGAP2-223	ENST00000489571	TRANK1	O15050	2925 aa		18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	SORBS3	O60504	671 aa		18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	CDC45	O75419	566 aa		18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	IQCF3	P0C7M6	154 aa		18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	PSEN2	P49810	448 aa		18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	MRPS9	P82933	396 aa	Known RBP	18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	SP2	Q02086	613 aa		18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	MFSD10	Q14728	455 aa		18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	SGMS1	Q86VZ5	419 aa		18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	RAB11FIP4	Q86YS3	637 aa		18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	CMTR1	Q8N1G2	835 aa	Known RBP	18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	MAFA	Q8NHW3	353 aa	Predicted RBP	18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	SPATA33	Q96N06	139 aa		18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	HDAC6	Q9UBN7	1215 aa		18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	GTF2IRD1	Q9UHL9	959 aa		18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	MSRA	Q9UJ68	235 aa		18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	SLC4A7	Q9Y6M7	1214 aa		18.22	■□□□□ 0.51
PGAP2-223	ENST00000489571	ZBBX	A8MT70	800 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	HAS3	O00219	553 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	PIK3CD	O00329	1044 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	PPFIA4	O75335	1185 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	STAM2	O75886	525 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	KIAA0753	Q2KHM9	967 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	HSDL1	Q3SXM5	330 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	GNPTAB	Q3T906	1256 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	USP17L6P	Q6QN14	398 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	CCDC155	Q8N6L0	562 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	C7orf31	Q8N865	590 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	SMARCC2	Q8TAQ2	1214 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	CAGE1	Q8TC20	777 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	CUL5	Q93034	780 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	INPP4A	Q96PE3	977 aa	Predicted RBP	18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	ALG1	Q9BT22	464 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	PTPRS	Q13332	1948 aa		18.21	■□□□□ 0.51
PGAP2-223	ENST00000489571	MEIS2	O14770	477 aa		18.2	■□□□□ 0.5
PGAP2-223	ENST00000489571	ICAM3	P32942	547 aa		18.2	■□□□□ 0.5
PGAP2-223	ENST00000489571	TMTC3	Q6ZXV5	915 aa		18.2	■□□□□ 0.5
PGAP2-223	ENST00000489571	MICU3	Q86XE3	530 aa		18.2	■□□□□ 0.5
PGAP2-223	ENST00000489571	FANCB	Q8NB91	859 aa		18.2	■□□□□ 0.5
PGAP2-223	ENST00000489571	AFAP1L1	Q8TED9	768 aa		18.2	■□□□□ 0.5
PGAP2-223	ENST00000489571	DHX38	Q92620	1227 aa	Known RBP	18.2	■□□□□ 0.5
PGAP2-223	ENST00000489571	NEK1	Q96PY6	1258 aa		18.2	■□□□□ 0.5
PGAP2-223	ENST00000489571	MLXIP	Q9HAP2	919 aa		18.2	■□□□□ 0.5
PGAP2-223	ENST00000489571	TTC28	Q96AY4	2481 aa		18.2	■□□□□ 0.5
PGAP2-223	ENST00000489571	DLL1	O00548	723 aa		18.19	■□□□□ 0.5
PGAP2-223	ENST00000489571	ACTN1	P12814	892 aa		18.19	■□□□□ 0.5
PGAP2-223	ENST00000489571	EXOSC10	Q01780	885 aa	Known RBP	18.19	■□□□□ 0.5
PGAP2-223	ENST00000489571	RBL2	Q08999	1139 aa		18.19	■□□□□ 0.5
PGAP2-223	ENST00000489571	SEMA3F	Q13275	785 aa		18.19	■□□□□ 0.5
PGAP2-223	ENST00000489571	TSGA10IP	Q3SY00	556 aa		18.19	■□□□□ 0.5
PGAP2-223	ENST00000489571	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
PGAP2-223	ENST00000489571	NKX2-4	Q9H2Z4	354 aa		18.19	■□□□□ 0.5
PGAP2-223	ENST00000489571	BCAS3	Q9H6U6	928 aa		18.19	■□□□□ 0.5
PGAP2-223	ENST00000489571	YBX2	Q9Y2T7	364 aa	Known RBP	18.19	■□□□□ 0.5
PGAP2-223	ENST00000489571	hCG_1642624	A0A1W2PR95	340 aa		18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	SPATA31C2	B4DYI2	1134 aa		18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	FIBP	O43427	364 aa		18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	SELP	P16109	830 aa		18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	ATP2A2	P16615	1042 aa	Known RBP	18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	RABGGTB	P53611	331 aa		18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	PCNX4	Q63HM2	1172 aa		18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	XRRA1	Q6P2D8	792 aa		18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	APOA5	Q6Q788	366 aa		18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	DHX32	Q7L7V1	743 aa	Known RBP	18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	RASEF	Q8IZ41	740 aa		18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	CCDC82	Q8N4S0	544 aa		18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	TCEANC2	Q96MN5	208 aa		18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	C16orf70	Q9BSU1	422 aa		18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	FTO	Q9C0B1	505 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	PSTPIP2	Q9H939	334 aa		18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	RTEL1	Q9NZ71	1219 aa		18.18	■□□□□ 0.5
PGAP2-223	ENST00000489571	VCAN	P13611	3396 aa		18.17	■□□□□ 0.5
PGAP2-223	ENST00000489571	NEDD9	Q14511	834 aa		18.17	■□□□□ 0.5
PGAP2-223	ENST00000489571	ADCK5	Q3MIX3	580 aa		18.17	■□□□□ 0.5
PGAP2-223	ENST00000489571	METTL7B	Q6UX53	244 aa		18.17	■□□□□ 0.5
PGAP2-223	ENST00000489571	SYNE3	Q6ZMZ3	975 aa		18.17	■□□□□ 0.5
PGAP2-223	ENST00000489571	LRRC8D	Q7L1W4	858 aa		18.17	■□□□□ 0.5
PGAP2-223	ENST00000489571	PRDM12	Q9H4Q4	367 aa		18.17	■□□□□ 0.5
PGAP2-223	ENST00000489571	SLC28A3	Q9HAS3	691 aa		18.17	■□□□□ 0.5
PGAP2-223	ENST00000489571	PCDHA11	Q9Y5I1	949 aa		18.17	■□□□□ 0.5
PGAP2-223	ENST00000489571	NOP56	O00567	594 aa	Known RBP	18.16	■□□□□ 0.5
PGAP2-223	ENST00000489571	LGALS2	P05162	132 aa		18.16	■□□□□ 0.5
PGAP2-223	ENST00000489571	CKB	P12277	381 aa		18.16	■□□□□ 0.5
PGAP2-223	ENST00000489571	PTK7	Q13308	1070 aa		18.16	■□□□□ 0.5
PGAP2-223	ENST00000489571	HIC1	Q14526	733 aa		18.16	■□□□□ 0.5
PGAP2-223	ENST00000489571	KRT32	Q14532	448 aa		18.16	■□□□□ 0.5
PGAP2-223	ENST00000489571	GPNMB	Q14956	572 aa		18.16	■□□□□ 0.5
PGAP2-223	ENST00000489571	TRIM71	Q2Q1W2	868 aa	Known RBP	18.16	■□□□□ 0.5
PGAP2-223	ENST00000489571	CYFIP1	Q7L576	1253 aa		18.16	■□□□□ 0.5
PGAP2-223	ENST00000489571	CCDC136	Q96JN2	1154 aa		18.16	■□□□□ 0.5
PGAP2-223	ENST00000489571	RBM28	Q9NW13	759 aa	Known RBP	18.16	■□□□□ 0.5
PGAP2-223	ENST00000489571	MICAL3	Q7RTP6	2002 aa		18.16	■□□□□ 0.5
PGAP2-223	ENST00000489571	CNTNAP5	Q8WYK1	1306 aa		18.16	■□□□□ 0.5
PGAP2-223	ENST00000489571	PRRC2B	Q5JSZ5	2229 aa	Known RBP	18.15	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms