RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 PPM1EQ8WY54 764 aa21.16■□□□□ 0.98
ATG9A-222ENST00000488833 DHX38Q92620 1227 aaKnown RBP21.16■□□□□ 0.98
ATG9A-222ENST00000488833 GPKOWQ92917 476 aaPredicted RBP eCLIP21.16■□□□□ 0.98
ATG9A-222ENST00000488833 SPZ1Q9BXG8 430 aa21.16■□□□□ 0.98
ATG9A-222ENST00000488833 LSG1Q9H089 658 aaKnown RBP21.16■□□□□ 0.98
ATG9A-222ENST00000488833 HOXD8P13378 290 aaPredicted RBP21.15■□□□□ 0.98
ATG9A-222ENST00000488833 IGFBP4P22692 258 aa21.15■□□□□ 0.98
ATG9A-222ENST00000488833 ADGRE1Q14246 886 aa21.15■□□□□ 0.98
ATG9A-222ENST00000488833 HSDL1Q3SXM5 330 aa21.15■□□□□ 0.98
ATG9A-222ENST00000488833 RRP36Q96EU6 259 aaKnown RBP21.15■□□□□ 0.98
ATG9A-222ENST00000488833 SLC9A7Q96T83 725 aa21.15■□□□□ 0.98
ATG9A-222ENST00000488833 MAP3K14Q99558 947 aa21.15■□□□□ 0.98
ATG9A-222ENST00000488833 ESYT1Q9BSJ8 1104 aa21.15■□□□□ 0.98
ATG9A-222ENST00000488833 VCANP13611 3396 aa21.14■□□□□ 0.98
ATG9A-222ENST00000488833 FRMPD4Q14CM0 1322 aa21.14■□□□□ 0.97
ATG9A-222ENST00000488833 HAS3O00219 553 aa21.14■□□□□ 0.97
ATG9A-222ENST00000488833 SLC27A2O14975 620 aa21.14■□□□□ 0.97
ATG9A-222ENST00000488833 TGFB3P10600 412 aa21.14■□□□□ 0.97
ATG9A-222ENST00000488833 SELPP16109 830 aa21.14■□□□□ 0.97
ATG9A-222ENST00000488833 MCM5P33992 734 aa21.14■□□□□ 0.97
ATG9A-222ENST00000488833 SP2Q02086 613 aa21.14■□□□□ 0.97
ATG9A-222ENST00000488833 LRRC8DQ7L1W4 858 aa21.14■□□□□ 0.97
ATG9A-222ENST00000488833 MTA3Q9BTC8 594 aa21.14■□□□□ 0.97
ATG9A-222ENST00000488833 MLXIPQ9HAP2 919 aa21.14■□□□□ 0.97
ATG9A-222ENST00000488833 SEC63Q9UGP8 760 aaKnown RBP21.14■□□□□ 0.97
ATG9A-222ENST00000488833 CCDC69A6NI79 296 aa21.13■□□□□ 0.97
ATG9A-222ENST00000488833 SH2B2O14492 632 aaPredicted RBP21.13■□□□□ 0.97
ATG9A-222ENST00000488833 PPFIA4O75335 1185 aa21.13■□□□□ 0.97
ATG9A-222ENST00000488833 RBL2Q08999 1139 aa21.13■□□□□ 0.97
ATG9A-222ENST00000488833 GNPTABQ3T906 1256 aa21.13■□□□□ 0.97
ATG9A-222ENST00000488833 TMEM87BQ96K49 555 aa21.13■□□□□ 0.97
ATG9A-222ENST00000488833 ANO2Q9NQ90 1003 aa21.13■□□□□ 0.97
ATG9A-222ENST00000488833 PRDM6Q9NQX0 595 aa21.13■□□□□ 0.97
ATG9A-222ENST00000488833 CHD7Q9P2D1 2997 aa21.13■□□□□ 0.97
ATG9A-222ENST00000488833 BAIAP3O94812 1187 aa21.12■□□□□ 0.97
ATG9A-222ENST00000488833 PLEKHA8P1O95397 391 aa21.12■□□□□ 0.97
ATG9A-222ENST00000488833 CA3P07451 260 aa21.12■□□□□ 0.97
ATG9A-222ENST00000488833 KCNJ6P48051 423 aa21.12■□□□□ 0.97
ATG9A-222ENST00000488833 PTK7Q13308 1070 aa21.12■□□□□ 0.97
ATG9A-222ENST00000488833 COL9A3Q14050 684 aaPredicted RBP21.12■□□□□ 0.97
ATG9A-222ENST00000488833 CREB3L3Q68CJ9 461 aa21.12■□□□□ 0.97
ATG9A-222ENST00000488833 SMARCC2Q8TAQ2 1214 aa21.12■□□□□ 0.97
ATG9A-222ENST00000488833 PHOSPHO2Q8TCD6 241 aa21.12■□□□□ 0.97
ATG9A-222ENST00000488833 CUL5Q93034 780 aa21.12■□□□□ 0.97
ATG9A-222ENST00000488833 LZTS2Q9BRK4 669 aa21.12■□□□□ 0.97
ATG9A-222ENST00000488833 SPTBN5Q9NRC6 3674 aaKnown RBP21.12■□□□□ 0.97
ATG9A-222ENST00000488833 DOCK5Q9H7D0 1870 aa21.11■□□□□ 0.97
ATG9A-222ENST00000488833 CKBP12277 381 aa21.11■□□□□ 0.97
ATG9A-222ENST00000488833 RXRAP19793 462 aa21.11■□□□□ 0.97
ATG9A-222ENST00000488833 GNAQP50148 359 aa21.11■□□□□ 0.97
ATG9A-222ENST00000488833 MRPS9P82933 396 aaKnown RBP21.11■□□□□ 0.97
ATG9A-222ENST00000488833 ZNF200P98182 395 aaPredicted RBP21.11■□□□□ 0.97
ATG9A-222ENST00000488833 CCDC85BQ15834 202 aaPredicted RBP21.11■□□□□ 0.97
ATG9A-222ENST00000488833 USP17L6PQ6QN14 398 aa21.11■□□□□ 0.97
ATG9A-222ENST00000488833 HERC6Q8IVU3 1022 aa21.11■□□□□ 0.97
ATG9A-222ENST00000488833 TMTC2Q8N394 836 aa21.11■□□□□ 0.97
ATG9A-222ENST00000488833 INPP4AQ96PE3 977 aaPredicted RBP21.11■□□□□ 0.97
ATG9A-222ENST00000488833 PTPRSQ13332 1948 aa21.11■□□□□ 0.97
ATG9A-222ENST00000488833 NOP56O00567 594 aaKnown RBP21.1■□□□□ 0.97
ATG9A-222ENST00000488833 STAM2O75886 525 aa21.1■□□□□ 0.97
ATG9A-222ENST00000488833 PARNO95453 639 aaKnown RBP21.1■□□□□ 0.97
ATG9A-222ENST00000488833 SMARCA1P28370 1054 aa21.1■□□□□ 0.97
ATG9A-222ENST00000488833 GPNMBQ14956 572 aa21.1■□□□□ 0.97
ATG9A-222ENST00000488833 RAB11FIP4Q86YS3 637 aa21.1■□□□□ 0.97
ATG9A-222ENST00000488833 SRBD1Q8N5C6 995 aaKnown RBP21.1■□□□□ 0.97
ATG9A-222ENST00000488833 WNT8BQ93098 351 aa21.1■□□□□ 0.97
ATG9A-222ENST00000488833 C16orf70Q9BSU1 422 aa21.1■□□□□ 0.97
ATG9A-222ENST00000488833 LRRC2Q9BYS8 371 aa21.1■□□□□ 0.97
ATG9A-222ENST00000488833 BCAS3Q9H6U6 928 aa21.1■□□□□ 0.97
ATG9A-222ENST00000488833 RTEL1Q9NZ71 1219 aa21.1■□□□□ 0.97
ATG9A-222ENST00000488833 KIF28PB7ZC32 967 aa21.09■□□□□ 0.97
ATG9A-222ENST00000488833 NBNO60934 754 aa21.09■□□□□ 0.97
ATG9A-222ENST00000488833 LGALS2P05162 132 aa21.09■□□□□ 0.97
ATG9A-222ENST00000488833 CALM1P0DP23 149 aa21.09■□□□□ 0.97
ATG9A-222ENST00000488833 CALM2P0DP24 149 aa21.09■□□□□ 0.97
ATG9A-222ENST00000488833 CALM3P0DP25 149 aa21.09■□□□□ 0.97
ATG9A-222ENST00000488833 ICAM3P32942 547 aa21.09■□□□□ 0.97
ATG9A-222ENST00000488833 SEMA3FQ13275 785 aa21.09■□□□□ 0.97
ATG9A-222ENST00000488833 TRIM71Q2Q1W2 868 aaKnown RBP21.09■□□□□ 0.97
ATG9A-222ENST00000488833 CNKSR3Q6P9H4 555 aa21.09■□□□□ 0.97
ATG9A-222ENST00000488833 CMTR1Q8N1G2 835 aaKnown RBP21.09■□□□□ 0.97
ATG9A-222ENST00000488833 CERS4Q9HA82 394 aa21.09■□□□□ 0.97
ATG9A-222ENST00000488833 C17orf102A2RUQ5 167 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 SPATA31C2B4DYI2 1134 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 FIBPO43427 364 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 CXCL10P02778 98 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 LIFRP42702 1097 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 WDR5P61964 334 aaKnown RBP21.08■□□□□ 0.97
ATG9A-222ENST00000488833 NEDD9Q14511 834 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 HIC1Q14526 733 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 NECTIN1Q15223 517 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 TJAP1Q5JTD0 557 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 ZNF618Q5T7W0 954 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 CYFIP1Q7L576 1253 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 SKAP1Q86WV1 359 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 MICALL1Q8N3F8 863 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 SYMPKQ92797 1274 aaKnown RBP21.08■□□□□ 0.97
ATG9A-222ENST00000488833 THEGQ9P2T0 379 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 SLC12A7Q9Y666 1083 aa21.08■□□□□ 0.97
ATG9A-222ENST00000488833 PRRC2BQ5JSZ5 2229 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms