RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 GPKOWQ92917 476 aaPredicted RBP eCLIP17.63■□□□□ 0.41
LIMS3-203ENST00000480744 CTAGE1Q96RT6 745 aa17.63■□□□□ 0.41
LIMS3-203ENST00000480744 SLC9A7Q96T83 725 aa17.63■□□□□ 0.41
LIMS3-203ENST00000480744 LY9Q9HBG7 655 aa17.63■□□□□ 0.41
LIMS3-203ENST00000480744 PRDM6Q9NQX0 595 aa17.63■□□□□ 0.41
LIMS3-203ENST00000480744 DDAH1O94760 285 aa17.62■□□□□ 0.41
LIMS3-203ENST00000480744 F2P00734 622 aa17.62■□□□□ 0.41
LIMS3-203ENST00000480744 CA3P07451 260 aa17.62■□□□□ 0.41
LIMS3-203ENST00000480744 SELPP16109 830 aa17.62■□□□□ 0.41
LIMS3-203ENST00000480744 KIF5BP33176 963 aa17.62■□□□□ 0.41
LIMS3-203ENST00000480744 SP2Q02086 613 aa17.62■□□□□ 0.41
LIMS3-203ENST00000480744 HSDL1Q3SXM5 330 aa17.62■□□□□ 0.41
LIMS3-203ENST00000480744 LRRC8DQ7L1W4 858 aa17.62■□□□□ 0.41
LIMS3-203ENST00000480744 DHX38Q92620 1227 aaKnown RBP17.62■□□□□ 0.41
LIMS3-203ENST00000480744 RRP36Q96EU6 259 aaKnown RBP17.62■□□□□ 0.41
LIMS3-203ENST00000480744 MLXIPQ9HAP2 919 aa17.62■□□□□ 0.41
LIMS3-203ENST00000480744 CCDC69A6NI79 296 aa17.61■□□□□ 0.41
LIMS3-203ENST00000480744 MCM5P33992 734 aa17.61■□□□□ 0.41
LIMS3-203ENST00000480744 KCNJ6P48051 423 aa17.61■□□□□ 0.41
LIMS3-203ENST00000480744 MICALL1Q8N3F8 863 aa17.61■□□□□ 0.41
LIMS3-203ENST00000480744 SMARCC2Q8TAQ2 1214 aa17.61■□□□□ 0.41
LIMS3-203ENST00000480744 LSG1Q9H089 658 aaKnown RBP17.61■□□□□ 0.41
LIMS3-203ENST00000480744 SEC63Q9UGP8 760 aaKnown RBP17.61■□□□□ 0.41
LIMS3-203ENST00000480744 KAT6AQ92794 2004 aa17.6■□□□□ 0.41
LIMS3-203ENST00000480744 HAS3O00219 553 aa17.6■□□□□ 0.41
LIMS3-203ENST00000480744 SLC27A2O14975 620 aa17.6■□□□□ 0.41
LIMS3-203ENST00000480744 PPFIA4O75335 1185 aa17.6■□□□□ 0.41
LIMS3-203ENST00000480744 TGFB3P10600 412 aa17.6■□□□□ 0.41
LIMS3-203ENST00000480744 CKBP12277 381 aa17.6■□□□□ 0.41
LIMS3-203ENST00000480744 RXRAP19793 462 aa17.6■□□□□ 0.41
LIMS3-203ENST00000480744 ZNF200P98182 395 aaPredicted RBP17.6■□□□□ 0.41
LIMS3-203ENST00000480744 GNPTABQ3T906 1256 aa17.6■□□□□ 0.41
LIMS3-203ENST00000480744 HERC6Q8IVU3 1022 aa17.6■□□□□ 0.41
LIMS3-203ENST00000480744 CUL5Q93034 780 aa17.6■□□□□ 0.41
LIMS3-203ENST00000480744 ESYT1Q9BSJ8 1104 aa17.6■□□□□ 0.41
LIMS3-203ENST00000480744 SPZ1Q9BXG8 430 aa17.6■□□□□ 0.41
LIMS3-203ENST00000480744 CERS4Q9HA82 394 aa17.6■□□□□ 0.41
LIMS3-203ENST00000480744 RTEL1Q9NZ71 1219 aa17.6■□□□□ 0.41
LIMS3-203ENST00000480744 CHD7Q9P2D1 2997 aa17.59■□□□□ 0.41
LIMS3-203ENST00000480744 KIF28PB7ZC32 967 aa17.59■□□□□ 0.41
LIMS3-203ENST00000480744 NOP56O00567 594 aaKnown RBP17.59■□□□□ 0.41
LIMS3-203ENST00000480744 SH2B2O14492 632 aaPredicted RBP17.59■□□□□ 0.41
LIMS3-203ENST00000480744 BAIAP3O94812 1187 aa17.59■□□□□ 0.41
LIMS3-203ENST00000480744 PLEKHA8P1O95397 391 aa17.59■□□□□ 0.41
LIMS3-203ENST00000480744 HOXD8P13378 290 aaPredicted RBP17.59■□□□□ 0.41
LIMS3-203ENST00000480744 PTK7Q13308 1070 aa17.59■□□□□ 0.41
LIMS3-203ENST00000480744 USP17L6PQ6QN14 398 aa17.59■□□□□ 0.41
LIMS3-203ENST00000480744 RAB11FIP4Q86YS3 637 aa17.59■□□□□ 0.41
LIMS3-203ENST00000480744 CMTR1Q8N1G2 835 aaKnown RBP17.59■□□□□ 0.41
LIMS3-203ENST00000480744 PHOSPHO2Q8TCD6 241 aa17.59■□□□□ 0.41
LIMS3-203ENST00000480744 SYMPKQ92797 1274 aaKnown RBP17.59■□□□□ 0.41
LIMS3-203ENST00000480744 TMEM87BQ96K49 555 aa17.59■□□□□ 0.41
LIMS3-203ENST00000480744 MAP3K14Q99558 947 aa17.59■□□□□ 0.41
LIMS3-203ENST00000480744 BCAS3Q9H6U6 928 aa17.59■□□□□ 0.41
LIMS3-203ENST00000480744 ANO2Q9NQ90 1003 aa17.59■□□□□ 0.41
LIMS3-203ENST00000480744 FRMPD4Q14CM0 1322 aa17.58■□□□□ 0.4
LIMS3-203ENST00000480744 RFXAPO00287 272 aa17.58■□□□□ 0.4
LIMS3-203ENST00000480744 GNAQP50148 359 aa17.58■□□□□ 0.4
LIMS3-203ENST00000480744 MRPS9P82933 396 aaKnown RBP17.58■□□□□ 0.4
LIMS3-203ENST00000480744 RBL2Q08999 1139 aa17.58■□□□□ 0.4
LIMS3-203ENST00000480744 GPNMBQ14956 572 aa17.58■□□□□ 0.4
LIMS3-203ENST00000480744 TJAP1Q5JTD0 557 aa17.58■□□□□ 0.4
LIMS3-203ENST00000480744 CREB3L3Q68CJ9 461 aa17.58■□□□□ 0.4
LIMS3-203ENST00000480744 TMTC2Q8N394 836 aa17.58■□□□□ 0.4
LIMS3-203ENST00000480744 WNT8BQ93098 351 aa17.58■□□□□ 0.4
LIMS3-203ENST00000480744 LZTS2Q9BRK4 669 aa17.58■□□□□ 0.4
LIMS3-203ENST00000480744 C16orf70Q9BSU1 422 aa17.58■□□□□ 0.4
LIMS3-203ENST00000480744 MTA3Q9BTC8 594 aa17.58■□□□□ 0.4
LIMS3-203ENST00000480744 LRRC2Q9BYS8 371 aa17.58■□□□□ 0.4
LIMS3-203ENST00000480744 THEGQ9P2T0 379 aa17.58■□□□□ 0.4
LIMS3-203ENST00000480744 RBAK-RBAKDNI3L0D1 243 aa17.57■□□□□ 0.4
LIMS3-203ENST00000480744 TLL1O43897 1013 aa17.57■□□□□ 0.4
LIMS3-203ENST00000480744 NBNO60934 754 aa17.57■□□□□ 0.4
LIMS3-203ENST00000480744 STAM2O75886 525 aa17.57■□□□□ 0.4
LIMS3-203ENST00000480744 PARNO95453 639 aaKnown RBP17.57■□□□□ 0.4
LIMS3-203ENST00000480744 LGALS2P05162 132 aa17.57■□□□□ 0.4
LIMS3-203ENST00000480744 WDR5P61964 334 aaKnown RBP17.57■□□□□ 0.4
LIMS3-203ENST00000480744 SP4Q02446 784 aa17.57■□□□□ 0.4
LIMS3-203ENST00000480744 COL9A3Q14050 684 aaPredicted RBP17.57■□□□□ 0.4
LIMS3-203ENST00000480744 HIC1Q14526 733 aa17.57■□□□□ 0.4
LIMS3-203ENST00000480744 ZNF618Q5T7W0 954 aa17.57■□□□□ 0.4
LIMS3-203ENST00000480744 CNKSR3Q6P9H4 555 aa17.57■□□□□ 0.4
LIMS3-203ENST00000480744 CYFIP1Q7L576 1253 aa17.57■□□□□ 0.4
LIMS3-203ENST00000480744 TMCO2Q7Z6W1 182 aaPredicted RBP17.57■□□□□ 0.4
LIMS3-203ENST00000480744 SKAP1Q86WV1 359 aa17.57■□□□□ 0.4
LIMS3-203ENST00000480744 SRBD1Q8N5C6 995 aaKnown RBP17.57■□□□□ 0.4
LIMS3-203ENST00000480744 ARNTL2Q8WYA1 636 aa17.57■□□□□ 0.4
LIMS3-203ENST00000480744 INPP4AQ96PE3 977 aaPredicted RBP17.57■□□□□ 0.4
LIMS3-203ENST00000480744 ZBED2Q9BTP6 218 aa17.57■□□□□ 0.4
LIMS3-203ENST00000480744 COL4A4P53420 1690 aaPredicted RBP17.57■□□□□ 0.4
LIMS3-203ENST00000480744 MICAL3Q7RTP6 2002 aa17.57■□□□□ 0.4
LIMS3-203ENST00000480744 PRRC2BQ5JSZ5 2229 aaKnown RBP17.56■□□□□ 0.4
LIMS3-203ENST00000480744 hCG_1642624A0A1W2PR95 340 aa17.56■□□□□ 0.4
LIMS3-203ENST00000480744 C17orf102A2RUQ5 167 aa17.56■□□□□ 0.4
LIMS3-203ENST00000480744 SPATA31C2B4DYI2 1134 aa17.56■□□□□ 0.4
LIMS3-203ENST00000480744 H3BRB1 525 aa17.56■□□□□ 0.4
LIMS3-203ENST00000480744 FIBPO43427 364 aa17.56■□□□□ 0.4
LIMS3-203ENST00000480744 CALM1P0DP23 149 aa17.56■□□□□ 0.4
LIMS3-203ENST00000480744 CALM2P0DP24 149 aa17.56■□□□□ 0.4
LIMS3-203ENST00000480744 CALM3P0DP25 149 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms