RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 TNMDQ9H2S6 317 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 LRWD1Q9UFC0 647 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 PCDHA12Q9UN75 941 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 ZNF236Q9UL36 1845 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 PLXNA1Q9UIW2 1896 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 CTAGE5O15320 804 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 FOXN1O15353 648 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 MYCLP12524 364 aaPredicted RBP14.66□□□□□ -0.06
COL4A1-202ENST00000467182 CCND2P30279 289 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 ALDH5A1P51649 535 aaPredicted RBP14.66□□□□□ -0.06
COL4A1-202ENST00000467182 INHBEP58166 350 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 SEMA3FQ13275 785 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 FAM110CQ1W6H9 321 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 CYP4F22Q6NT55 531 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 PDXDC2PQ6P474 469 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 CABP7Q86V35 215 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 CKAP2LQ8IYA6 745 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 DHX58Q96C10 678 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 PNMA5Q96PV4 448 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 IWS1Q96ST2 819 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 MMP19Q99542 508 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 AGO4Q9HCK5 861 aaKnown RBP14.66□□□□□ -0.06
COL4A1-202ENST00000467182 DISC1Q9NRI5 854 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 KIAA1217Q5T5P2 1943 aa14.66□□□□□ -0.06
COL4A1-202ENST00000467182 RASSF10A6NK89 507 aa14.65□□□□□ -0.06
COL4A1-202ENST00000467182 POTEB2H3BUK9 544 aa14.65□□□□□ -0.06
COL4A1-202ENST00000467182 DHX15O43143 795 aaKnown RBP14.65□□□□□ -0.06
COL4A1-202ENST00000467182 SLFN14P0C7P3 912 aa14.65□□□□□ -0.06
COL4A1-202ENST00000467182 UBA7P41226 1012 aa14.65□□□□□ -0.06
COL4A1-202ENST00000467182 CCNA1P78396 465 aa14.65□□□□□ -0.06
COL4A1-202ENST00000467182 GRB10Q13322 594 aa14.65□□□□□ -0.06
COL4A1-202ENST00000467182 GSE1Q14687 1217 aa14.65□□□□□ -0.06
COL4A1-202ENST00000467182 HYIQ5T013 277 aa14.65□□□□□ -0.06
COL4A1-202ENST00000467182 OTOP1Q7RTM1 612 aa14.65□□□□□ -0.06
COL4A1-202ENST00000467182 CNNM3Q8NE01 707 aa14.65□□□□□ -0.06
COL4A1-202ENST00000467182 ERCC4Q92889 916 aaPredicted RBP14.65□□□□□ -0.06
COL4A1-202ENST00000467182 INPP4AQ96PE3 977 aaPredicted RBP14.65□□□□□ -0.06
COL4A1-202ENST00000467182 MTRQ99707 1265 aa14.65□□□□□ -0.06
COL4A1-202ENST00000467182 KCNH7Q9NS40 1196 aa14.65□□□□□ -0.06
COL4A1-202ENST00000467182 USP25Q9UHP3 1055 aa14.65□□□□□ -0.06
COL4A1-202ENST00000467182 EML1O00423 815 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 MARCH6O60337 910 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 PGK2P07205 417 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 PRR29P0C7W0 189 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 FCER1AP12319 257 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 TXLNAP40222 546 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 SREBF2Q12772 1141 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 ITGB3BPQ13352 177 aaPredicted RBP14.64□□□□□ -0.07
COL4A1-202ENST00000467182 PPP2R5CQ13362 524 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 KCTD2Q14681 263 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 TAF1CQ15572 869 aaPredicted RBP14.64□□□□□ -0.07
COL4A1-202ENST00000467182 ECM1Q16610 540 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 TMEM119Q4V9L6 283 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 C17orf99Q6UX52 265 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 GRAMD1CQ8IYS0 662 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 GPRASP2Q96D09 838 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 RIT2Q99578 217 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 SDF4Q9BRK5 362 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 PYM1Q9BRP8 204 aaKnown RBP14.64□□□□□ -0.07
COL4A1-202ENST00000467182 ZNF577Q9BSK1 485 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 RAB34Q9BZG1 259 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 CREBZFQ9NS37 354 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 CPA4Q9UI42 421 aa14.64□□□□□ -0.07
COL4A1-202ENST00000467182 FSD2A1L4K1 749 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 IPO5O00410 1097 aaKnown RBP14.63□□□□□ -0.07
COL4A1-202ENST00000467182 SLC26A4O43511 780 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 ATP9AO75110 1047 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 STAM2O75886 525 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 PLCG1P19174 1290 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 APLP1P51693 650 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 PNOCQ13519 176 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 MTMR1Q13613 665 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 LRCH2Q5VUJ6 765 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 ABRAQ8N0Z2 381 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 IQUBQ8NA54 791 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 MORC4Q8TE76 937 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 SNX29Q8TEQ0 813 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 PAGE5Q96GU1 130 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 UNC45AQ9H3U1 944 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 BLOC1S4Q9NUP1 217 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 KIAA1468Q9P260 1216 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 CCDC39Q9UFE4 941 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 TUBE1Q9UJT0 475 aa14.63□□□□□ -0.07
COL4A1-202ENST00000467182 TLR2O60603 784 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 COBLO75128 1261 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 MED24O75448 989 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 SPATA31C1P0DKV0 1188 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 ICAM3P32942 547 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 STAT6P42226 847 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 POSTNQ15063 836 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 DEFB115Q30KQ5 88 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 ZNF792Q3KQV3 632 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 RRAGBQ5VZM2 374 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 KRT79Q5XKE5 535 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 NCAPH2Q6IBW4 605 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 KANK3Q6NY19 840 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 KCNK18Q7Z418 384 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 GPR142Q7Z601 462 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 NLRX1Q86UT6 975 aa14.62□□□□□ -0.07
COL4A1-202ENST00000467182 SPATA20Q8TB22 786 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms