RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 NKX2-4Q9H2Z4 354 aa17.22■□□□□ 0.35
MRPL55-225ENST00000465268 GTF2IRD1Q9UHL9 959 aa17.22■□□□□ 0.35
MRPL55-225ENST00000465268 VCANP13611 3396 aa17.21■□□□□ 0.35
MRPL55-225ENST00000465268 DLL1O00548 723 aa17.21■□□□□ 0.35
MRPL55-225ENST00000465268 FOSL2P15408 326 aa17.21■□□□□ 0.35
MRPL55-225ENST00000465268 SMARCA1P28370 1054 aa17.21■□□□□ 0.35
MRPL55-225ENST00000465268 KIF5BP33176 963 aa17.21■□□□□ 0.35
MRPL55-225ENST00000465268 EXOSC10Q01780 885 aaKnown RBP17.21■□□□□ 0.35
MRPL55-225ENST00000465268 MFSD10Q14728 455 aa17.21■□□□□ 0.35
MRPL55-225ENST00000465268 KIAA0753Q2KHM9 967 aa17.21■□□□□ 0.35
MRPL55-225ENST00000465268 TCTN1Q2MV58 587 aa17.21■□□□□ 0.35
MRPL55-225ENST00000465268 RPUSD2Q8IZ73 545 aaKnown RBP17.21■□□□□ 0.35
MRPL55-225ENST00000465268 USP38Q8NB14 1042 aa17.21■□□□□ 0.35
MRPL55-225ENST00000465268 C16orf70Q9BSU1 422 aa17.21■□□□□ 0.35
MRPL55-225ENST00000465268 BRPF3Q9ULD4 1205 aa17.21■□□□□ 0.35
MRPL55-225ENST00000465268 BAZ2BQ9UIF8 2168 aaKnown RBP17.21■□□□□ 0.34
MRPL55-225ENST00000465268 ZBBXA8MT70 800 aa17.2■□□□□ 0.34
MRPL55-225ENST00000465268 PITPNM1O00562 1244 aa17.2■□□□□ 0.34
MRPL55-225ENST00000465268 TRAF1Q13077 416 aa17.2■□□□□ 0.34
MRPL55-225ENST00000465268 TRAF7Q6Q0C0 670 aa17.2■□□□□ 0.34
MRPL55-225ENST00000465268 TMTC3Q6ZXV5 915 aa17.2■□□□□ 0.34
MRPL55-225ENST00000465268 SGMS1Q86VZ5 419 aa17.2■□□□□ 0.34
MRPL55-225ENST00000465268 TMTC2Q8N394 836 aa17.2■□□□□ 0.34
MRPL55-225ENST00000465268 FANCBQ8NB91 859 aa17.2■□□□□ 0.34
MRPL55-225ENST00000465268 INPP4AQ96PE3 977 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-225ENST00000465268 NEK1Q96PY6 1258 aa17.2■□□□□ 0.34
MRPL55-225ENST00000465268 LZTS2Q9BRK4 669 aa17.2■□□□□ 0.34
MRPL55-225ENST00000465268 PRDM12Q9H4Q4 367 aa17.2■□□□□ 0.34
MRPL55-225ENST00000465268 NOD1Q9Y239 953 aa17.2■□□□□ 0.34
MRPL55-225ENST00000465268 SLC12A7Q9Y666 1083 aa17.2■□□□□ 0.34
MRPL55-225ENST00000465268 SLC4A7Q9Y6M7 1214 aa17.2■□□□□ 0.34
MRPL55-225ENST00000465268 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
MRPL55-225ENST00000465268 PPFIA4O75335 1185 aa17.19■□□□□ 0.34
MRPL55-225ENST00000465268 TGFB3P10600 412 aa17.19■□□□□ 0.34
MRPL55-225ENST00000465268 ICAM3P32942 547 aa17.19■□□□□ 0.34
MRPL55-225ENST00000465268 ADGRE1Q14246 886 aa17.19■□□□□ 0.34
MRPL55-225ENST00000465268 UBE2SQ16763 222 aa17.19■□□□□ 0.34
MRPL55-225ENST00000465268 TRIM71Q2Q1W2 868 aaKnown RBP17.19■□□□□ 0.34
MRPL55-225ENST00000465268 MICU3Q86XE3 530 aa17.19■□□□□ 0.34
MRPL55-225ENST00000465268 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.19■□□□□ 0.34
MRPL55-225ENST00000465268 C7orf31Q8N865 590 aa17.19■□□□□ 0.34
MRPL55-225ENST00000465268 RETREG2Q8NC44 543 aa17.19■□□□□ 0.34
MRPL55-225ENST00000465268 CHD7Q9P2D1 2997 aa17.18■□□□□ 0.34
MRPL55-225ENST00000465268 PIK3CDO00329 1044 aa17.18■□□□□ 0.34
MRPL55-225ENST00000465268 CDC45O75419 566 aa17.18■□□□□ 0.34
MRPL55-225ENST00000465268 ARHGEF15O94989 841 aa17.18■□□□□ 0.34
MRPL55-225ENST00000465268 CPA1P15085 419 aa17.18■□□□□ 0.34
MRPL55-225ENST00000465268 ATP2A2P16615 1042 aaKnown RBP17.18■□□□□ 0.34
MRPL55-225ENST00000465268 GNAQP50148 359 aa17.18■□□□□ 0.34
MRPL55-225ENST00000465268 BFSP2Q13515 415 aa17.18■□□□□ 0.34
MRPL55-225ENST00000465268 TSGA10IPQ3SY00 556 aa17.18■□□□□ 0.34
MRPL55-225ENST00000465268 TYW1BQ6NUM6 668 aa17.18■□□□□ 0.34
MRPL55-225ENST00000465268 KCNV1Q6PIU1 500 aa17.18■□□□□ 0.34
MRPL55-225ENST00000465268 CYFIP1Q7L576 1253 aa17.18■□□□□ 0.34
MRPL55-225ENST00000465268 SMARCC2Q8TAQ2 1214 aa17.18■□□□□ 0.34
MRPL55-225ENST00000465268 MTIF3Q9H2K0 278 aaKnown RBP17.18■□□□□ 0.34
MRPL55-225ENST00000465268 MLXIPQ9HAP2 919 aa17.18■□□□□ 0.34
MRPL55-225ENST00000465268 SEC63Q9UGP8 760 aaKnown RBP17.18■□□□□ 0.34
MRPL55-225ENST00000465268 MSRAQ9UJ68 235 aa17.18■□□□□ 0.34
MRPL55-225ENST00000465268 NBNO60934 754 aa17.17■□□□□ 0.34
MRPL55-225ENST00000465268 PFKMP08237 780 aa17.17■□□□□ 0.34
MRPL55-225ENST00000465268 CALM1P0DP23 149 aa17.17■□□□□ 0.34
MRPL55-225ENST00000465268 CALM2P0DP24 149 aa17.17■□□□□ 0.34
MRPL55-225ENST00000465268 CALM3P0DP25 149 aa17.17■□□□□ 0.34
MRPL55-225ENST00000465268 CKBP12277 381 aa17.17■□□□□ 0.34
MRPL55-225ENST00000465268 FUT2Q10981 343 aa17.17■□□□□ 0.34
MRPL55-225ENST00000465268 RAB30Q15771 203 aa17.17■□□□□ 0.34
MRPL55-225ENST00000465268 PCNX4Q63HM2 1172 aa17.17■□□□□ 0.34
MRPL55-225ENST00000465268 APOA5Q6Q788 366 aa17.17■□□□□ 0.34
MRPL55-225ENST00000465268 FTOQ9C0B1 505 aaKnown RBP eCLIP17.17■□□□□ 0.34
MRPL55-225ENST00000465268 PSTPIP2Q9H939 334 aa17.17■□□□□ 0.34
MRPL55-225ENST00000465268 FAM217BQ9NTX9 383 aaPredicted RBP17.17■□□□□ 0.34
MRPL55-225ENST00000465268 CNTNAP5Q8WYK1 1306 aa17.17■□□□□ 0.34
MRPL55-225ENST00000465268 ATP9AO75110 1047 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 LGALS2P05162 132 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 SELPP16109 830 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 ITGB5P18084 799 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 RFC2P35250 354 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 RBL2Q08999 1139 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 MBTPS1Q14703 1052 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 WWC2Q6AWC2 1192 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 LRRC8DQ7L1W4 858 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 DHX32Q7L7V1 743 aaKnown RBP17.16■□□□□ 0.34
MRPL55-225ENST00000465268 TMCO2Q7Z6W1 182 aaPredicted RBP17.16■□□□□ 0.34
MRPL55-225ENST00000465268 TRIM50Q86XT4 487 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 CAGE1Q8TC20 777 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 AFAP1L1Q8TED9 768 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 CUL5Q93034 780 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 GPR20Q99678 358 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 KATNAL1Q9BW62 490 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 OSBPL7Q9BZF2 842 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 PRDM6Q9NQX0 595 aa17.16■□□□□ 0.34
MRPL55-225ENST00000465268 SPTBN5Q9NRC6 3674 aaKnown RBP17.16■□□□□ 0.34
MRPL55-225ENST00000465268 FIBPO43427 364 aa17.15■□□□□ 0.34
MRPL55-225ENST00000465268 CDC27P30260 824 aa17.15■□□□□ 0.34
MRPL55-225ENST00000465268 SP4Q02446 784 aa17.15■□□□□ 0.34
MRPL55-225ENST00000465268 PTK7Q13308 1070 aa17.15■□□□□ 0.34
MRPL55-225ENST00000465268 GNPTABQ3T906 1256 aa17.15■□□□□ 0.34
MRPL55-225ENST00000465268 ZNF618Q5T7W0 954 aa17.15■□□□□ 0.34
MRPL55-225ENST00000465268 RNF20Q5VTR2 975 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms