RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 TGFB3P10600 412 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 RXRAP19793 462 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 UBA1P22314 1058 aaKnown RBP14.32□□□□□ -0.12
SMCR2-201ENST00000456090 RFC2P35250 354 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 PSEN2P49810 448 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 RABGGTBP53611 331 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 NECTIN1Q15223 517 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 HSDL1Q3SXM5 330 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 CELF3Q5SZQ8 465 aaKnown RBP14.32□□□□□ -0.12
SMCR2-201ENST00000456090 CMTR1Q8N1G2 835 aaKnown RBP14.32□□□□□ -0.12
SMCR2-201ENST00000456090 CCDC155Q8N6L0 562 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 C7orf31Q8N865 590 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 GPKOWQ92917 476 aaPredicted RBP eCLIP14.32□□□□□ -0.12
SMCR2-201ENST00000456090 SPATA33Q96N06 139 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 CTAGE1Q96RT6 745 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 LZTS2Q9BRK4 669 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 ALG1Q9BT22 464 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 LRRC2Q9BYS8 371 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 NKX2-4Q9H2Z4 354 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 HDAC6Q9UBN7 1215 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 SEC63Q9UGP8 760 aaKnown RBP14.32□□□□□ -0.12
SMCR2-201ENST00000456090 GTF2IRD1Q9UHL9 959 aa14.32□□□□□ -0.12
SMCR2-201ENST00000456090 YBX2Q9Y2T7 364 aaKnown RBP14.32□□□□□ -0.12
SMCR2-201ENST00000456090 ACTN1P12814 892 aa14.31□□□□□ -0.12
SMCR2-201ENST00000456090 HOXD8P13378 290 aaPredicted RBP14.31□□□□□ -0.12
SMCR2-201ENST00000456090 ATP2A2P16615 1042 aaKnown RBP14.31□□□□□ -0.12
SMCR2-201ENST00000456090 SMARCA1P28370 1054 aa14.31□□□□□ -0.12
SMCR2-201ENST00000456090 LIFRP42702 1097 aa14.31□□□□□ -0.12
SMCR2-201ENST00000456090 MFSD10Q14728 455 aa14.31□□□□□ -0.12
SMCR2-201ENST00000456090 KIAA0753Q2KHM9 967 aa14.31□□□□□ -0.12
SMCR2-201ENST00000456090 RAB11FIP4Q86YS3 637 aa14.31□□□□□ -0.12
SMCR2-201ENST00000456090 SRBD1Q8N5C6 995 aaKnown RBP14.31□□□□□ -0.12
SMCR2-201ENST00000456090 CAGE1Q8TC20 777 aa14.31□□□□□ -0.12
SMCR2-201ENST00000456090 FTOQ9C0B1 505 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMCR2-201ENST00000456090 SLC12A7Q9Y666 1083 aa14.31□□□□□ -0.12
SMCR2-201ENST00000456090 FRMPD4Q14CM0 1322 aa14.31□□□□□ -0.12
SMCR2-201ENST00000456090 MICAL3Q7RTP6 2002 aa14.31□□□□□ -0.12
SMCR2-201ENST00000456090 HAS3O00219 553 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 PPFIA4O75335 1185 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 CALM1P0DP23 149 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 CALM2P0DP24 149 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 CALM3P0DP25 149 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 MYOGP15173 224 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 GNAQP50148 359 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 MRPS9P82933 396 aaKnown RBP14.3□□□□□ -0.12
SMCR2-201ENST00000456090 GNPTABQ3T906 1256 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 USP17L6PQ6QN14 398 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 SMARCC2Q8TAQ2 1214 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 AFAP1L1Q8TED9 768 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 CUL5Q93034 780 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 GAS2L1Q99501 681 aaPredicted RBP14.3□□□□□ -0.12
SMCR2-201ENST00000456090 PRDM12Q9H4Q4 367 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 MLXIPQ9HAP2 919 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 SLC28A3Q9HAS3 691 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 RTEL1Q9NZ71 1219 aa14.3□□□□□ -0.12
SMCR2-201ENST00000456090 MEIS2O14770 477 aa14.29□□□□□ -0.12
SMCR2-201ENST00000456090 STAM2O75886 525 aa14.29□□□□□ -0.12
SMCR2-201ENST00000456090 RNF20Q5VTR2 975 aa14.29□□□□□ -0.12
SMCR2-201ENST00000456090 MICU3Q86XE3 530 aa14.29□□□□□ -0.12
SMCR2-201ENST00000456090 CCDC82Q8N4S0 544 aa14.29□□□□□ -0.12
SMCR2-201ENST00000456090 DHX38Q92620 1227 aaKnown RBP14.29□□□□□ -0.12
SMCR2-201ENST00000456090 INPP4AQ96PE3 977 aaPredicted RBP14.29□□□□□ -0.12
SMCR2-201ENST00000456090 BCAS3Q9H6U6 928 aa14.29□□□□□ -0.12
SMCR2-201ENST00000456090 PCDHA11Q9Y5I1 949 aa14.29□□□□□ -0.12
SMCR2-201ENST00000456090 PRRC2BQ5JSZ5 2229 aaKnown RBP14.29□□□□□ -0.12
SMCR2-201ENST00000456090 TTC28Q96AY4 2481 aa14.29□□□□□ -0.12
SMCR2-201ENST00000456090 hCG_1642624A0A1W2PR95 340 aa14.28□□□□□ -0.12
SMCR2-201ENST00000456090 PIK3CDO00329 1044 aa14.28□□□□□ -0.12
SMCR2-201ENST00000456090 NOP56O00567 594 aaKnown RBP14.28□□□□□ -0.12
SMCR2-201ENST00000456090 CKBP12277 381 aa14.28□□□□□ -0.12
SMCR2-201ENST00000456090 SELPP16109 830 aa14.28□□□□□ -0.12
SMCR2-201ENST00000456090 ZNF200P98182 395 aaPredicted RBP14.28□□□□□ -0.12
SMCR2-201ENST00000456090 PCNX4Q63HM2 1172 aa14.28□□□□□ -0.12
SMCR2-201ENST00000456090 PPP2R2DQ66LE6 453 aa14.28□□□□□ -0.12
SMCR2-201ENST00000456090 LRRC8DQ7L1W4 858 aa14.28□□□□□ -0.12
SMCR2-201ENST00000456090 CYFIP1Q7L576 1253 aa14.28□□□□□ -0.12
SMCR2-201ENST00000456090 SGMS1Q86VZ5 419 aa14.28□□□□□ -0.12
SMCR2-201ENST00000456090 USP38Q8NB14 1042 aa14.28□□□□□ -0.12
SMCR2-201ENST00000456090 FANCBQ8NB91 859 aa14.28□□□□□ -0.12
SMCR2-201ENST00000456090 SLC9A7Q96T83 725 aa14.28□□□□□ -0.12
SMCR2-201ENST00000456090 C16orf70Q9BSU1 422 aa14.28□□□□□ -0.12
SMCR2-201ENST00000456090 SPATA31C2B4DYI2 1134 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 FIBPO43427 364 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 ICAM3P32942 547 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 RBL2Q08999 1139 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 SEMA3FQ13275 785 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 PTK7Q13308 1070 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 NEDD9Q14511 834 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 HIC1Q14526 733 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 GPNMBQ14956 572 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 METTL7BQ6UX53 244 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 TMTC3Q6ZXV5 915 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 WNT8BQ93098 351 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 NEK1Q96PY6 1258 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 COL25A1Q9BXS0 654 aaPredicted RBP14.27□□□□□ -0.13
SMCR2-201ENST00000456090 PSTPIP2Q9H939 334 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 LOXHD1Q8IVV2 1947 aa14.27□□□□□ -0.13
SMCR2-201ENST00000456090 H3BRB1 525 aa14.26□□□□□ -0.13
SMCR2-201ENST00000456090 CDC45O75419 566 aa14.26□□□□□ -0.13
SMCR2-201ENST00000456090 BAIAP3O94812 1187 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms