RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 KATNAL1Q9BW62 490 aa21.75■■□□□ 1.07
COL20A1-204ENST00000455906 MTCH2Q9Y6C9 303 aa21.75■■□□□ 1.07
COL20A1-204ENST00000455906 U3KPZ7 1027 aaPredicted RBP21.75■■□□□ 1.07
COL20A1-204ENST00000455906 RBAK-RBAKDNI3L0D1 243 aa21.74■■□□□ 1.07
COL20A1-204ENST00000455906 IFIT3O14879 490 aaKnown RBP21.74■■□□□ 1.07
COL20A1-204ENST00000455906 NBNO60934 754 aa21.74■■□□□ 1.07
COL20A1-204ENST00000455906 WDR5P61964 334 aaKnown RBP21.74■■□□□ 1.07
COL20A1-204ENST00000455906 SP2Q02086 613 aa21.74■■□□□ 1.07
COL20A1-204ENST00000455906 TROAPQ12815 778 aa21.74■■□□□ 1.07
COL20A1-204ENST00000455906 HIC1Q14526 733 aa21.74■■□□□ 1.07
COL20A1-204ENST00000455906 TCTN1Q2MV58 587 aa21.74■■□□□ 1.07
COL20A1-204ENST00000455906 TRIM71Q2Q1W2 868 aaKnown RBP21.74■■□□□ 1.07
COL20A1-204ENST00000455906 HSDL1Q3SXM5 330 aa21.74■■□□□ 1.07
COL20A1-204ENST00000455906 CELF3Q5SZQ8 465 aaKnown RBP21.74■■□□□ 1.07
COL20A1-204ENST00000455906 TRAF7Q6Q0C0 670 aa21.74■■□□□ 1.07
COL20A1-204ENST00000455906 MICALL1Q8N3F8 863 aa21.74■■□□□ 1.07
COL20A1-204ENST00000455906 WNT8BQ93098 351 aa21.74■■□□□ 1.07
COL20A1-204ENST00000455906 PPFIA4O75335 1185 aa21.73■■□□□ 1.07
COL20A1-204ENST00000455906 PARNO95453 639 aaKnown RBP21.73■■□□□ 1.07
COL20A1-204ENST00000455906 UBA1P22314 1058 aaKnown RBP21.73■■□□□ 1.07
COL20A1-204ENST00000455906 ZNF200P98182 395 aaPredicted RBP21.73■■□□□ 1.07
COL20A1-204ENST00000455906 KCNV1Q6PIU1 500 aa21.73■■□□□ 1.07
COL20A1-204ENST00000455906 SPRED2Q7Z698 418 aa21.73■■□□□ 1.07
COL20A1-204ENST00000455906 ADAMTS19Q8TE59 1207 aa21.73■■□□□ 1.07
COL20A1-204ENST00000455906 ZFP91Q96JP5 570 aaPredicted RBP21.73■■□□□ 1.07
COL20A1-204ENST00000455906 TCF20Q9UGU0 1960 aaKnown RBP21.72■■□□□ 1.07
COL20A1-204ENST00000455906 KIF28PB7ZC32 967 aa21.72■■□□□ 1.07
COL20A1-204ENST00000455906 E7EWF7 191 aa21.72■■□□□ 1.07
COL20A1-204ENST00000455906 GCOM1H8Y6P7 765 aaPredicted RBP21.72■■□□□ 1.07
COL20A1-204ENST00000455906 SORBS3O60504 671 aa21.72■■□□□ 1.07
COL20A1-204ENST00000455906 GGPS1O95749 300 aa21.72■■□□□ 1.07
COL20A1-204ENST00000455906 POLR2MP0CAP2 368 aa21.72■■□□□ 1.07
COL20A1-204ENST00000455906 KCNJ6P48051 423 aa21.72■■□□□ 1.07
COL20A1-204ENST00000455906 DEFB103AP81534 67 aa21.72■■□□□ 1.07
COL20A1-204ENST00000455906 PTK7Q13308 1070 aa21.72■■□□□ 1.07
COL20A1-204ENST00000455906 CNKSR3Q6P9H4 555 aa21.72■■□□□ 1.07
COL20A1-204ENST00000455906 TMCO2Q7Z6W1 182 aaPredicted RBP21.72■■□□□ 1.07
COL20A1-204ENST00000455906 RUFY2Q8WXA3 655 aa21.72■■□□□ 1.07
COL20A1-204ENST00000455906 ARNTL2Q8WYA1 636 aa21.72■■□□□ 1.07
COL20A1-204ENST00000455906 GPKOWQ92917 476 aaPredicted RBP eCLIP21.72■■□□□ 1.07
COL20A1-204ENST00000455906 SPATA33Q96N06 139 aa21.72■■□□□ 1.07
COL20A1-204ENST00000455906 COL4A4P53420 1690 aaPredicted RBP21.72■■□□□ 1.07
COL20A1-204ENST00000455906 PNMA6FA0A0J9YX94 578 aa21.71■■□□□ 1.07
COL20A1-204ENST00000455906 LCHNA4D1U4 455 aa21.71■■□□□ 1.07
COL20A1-204ENST00000455906 TLL1O43897 1013 aa21.71■■□□□ 1.07
COL20A1-204ENST00000455906 TGFB3P10600 412 aa21.71■■□□□ 1.07
COL20A1-204ENST00000455906 CCND2P30279 289 aa21.71■■□□□ 1.07
COL20A1-204ENST00000455906 ANTXR2P58335 489 aa21.71■■□□□ 1.07
COL20A1-204ENST00000455906 MBTPS1Q14703 1052 aa21.71■■□□□ 1.07
COL20A1-204ENST00000455906 WTAPQ15007 396 aa21.71■■□□□ 1.07
COL20A1-204ENST00000455906 KRT40Q6A162 431 aa21.71■■□□□ 1.07
COL20A1-204ENST00000455906 C16orf70Q9BSU1 422 aa21.71■■□□□ 1.07
COL20A1-204ENST00000455906 TSPYL2Q9H2G4 693 aaPredicted RBP21.71■■□□□ 1.07
COL20A1-204ENST00000455906 SUPT16HQ9Y5B9 1047 aaKnown RBP21.71■■□□□ 1.07
COL20A1-204ENST00000455906 ERICH2A1L162 156 aa21.7■■□□□ 1.06
COL20A1-204ENST00000455906 SGSM2O43147 1006 aa21.7■■□□□ 1.06
COL20A1-204ENST00000455906 TFF2Q03403 129 aa21.7■■□□□ 1.06
COL20A1-204ENST00000455906 TRAF1Q13077 416 aa21.7■■□□□ 1.06
COL20A1-204ENST00000455906 ZNF618Q5T7W0 954 aa21.7■■□□□ 1.06
COL20A1-204ENST00000455906 RALYLQ86SE5 291 aaKnown RBP21.7■■□□□ 1.06
COL20A1-204ENST00000455906 FCHSD1Q86WN1 690 aa21.7■■□□□ 1.06
COL20A1-204ENST00000455906 NCOA7Q8NI08 942 aa21.7■■□□□ 1.06
COL20A1-204ENST00000455906 UHRF1Q96T88 793 aaPredicted RBP21.7■■□□□ 1.06
COL20A1-204ENST00000455906 BCAS3Q9H6U6 928 aa21.7■■□□□ 1.06
COL20A1-204ENST00000455906 FRMPD4Q14CM0 1322 aa21.7■■□□□ 1.06
COL20A1-204ENST00000455906 DOCK5Q9H7D0 1870 aa21.69■■□□□ 1.06
COL20A1-204ENST00000455906 GTPBP6O43824 516 aaPredicted RBP21.69■■□□□ 1.06
COL20A1-204ENST00000455906 LPXNO60711 386 aa21.69■■□□□ 1.06
COL20A1-204ENST00000455906 IGDCC4Q8TDY8 1250 aa21.69■■□□□ 1.06
COL20A1-204ENST00000455906 BRWD1Q9NSI6 2320 aa21.68■■□□□ 1.06
COL20A1-204ENST00000455906 ABHD14A-ACY1A0A1B0GW23 586 aa21.68■■□□□ 1.06
COL20A1-204ENST00000455906 BMP1P13497 986 aa21.68■■□□□ 1.06
COL20A1-204ENST00000455906 HOXC8P31273 242 aa21.68■■□□□ 1.06
COL20A1-204ENST00000455906 MRPS9P82933 396 aaKnown RBP21.68■■□□□ 1.06
COL20A1-204ENST00000455906 GRB10Q13322 594 aa21.68■■□□□ 1.06
COL20A1-204ENST00000455906 SART3Q15020 963 aaKnown RBP21.68■■□□□ 1.06
COL20A1-204ENST00000455906 MB21D2Q8IYB1 491 aaPredicted RBP21.68■■□□□ 1.06
COL20A1-204ENST00000455906 MICAL3Q7RTP6 2002 aa21.67■■□□□ 1.06
COL20A1-204ENST00000455906 GJB5O95377 273 aa21.67■■□□□ 1.06
COL20A1-204ENST00000455906 CATIPQ7Z7H3 387 aa21.67■■□□□ 1.06
COL20A1-204ENST00000455906 SERINC5Q86VE9 423 aa21.67■■□□□ 1.06
COL20A1-204ENST00000455906 MAP4K1Q92918 833 aa21.67■■□□□ 1.06
COL20A1-204ENST00000455906 INPP4AQ96PE3 977 aaPredicted RBP21.67■■□□□ 1.06
COL20A1-204ENST00000455906 MLXIPQ9HAP2 919 aa21.67■■□□□ 1.06
COL20A1-204ENST00000455906 ICAM3P32942 547 aa21.66■■□□□ 1.06
COL20A1-204ENST00000455906 SEMA3FQ13275 785 aa21.66■■□□□ 1.06
COL20A1-204ENST00000455906 MKRN4PQ13434 485 aaPredicted RBP21.66■■□□□ 1.06
COL20A1-204ENST00000455906 SKIV2LQ15477 1246 aaKnown RBP21.66■■□□□ 1.06
COL20A1-204ENST00000455906 IL27Q8NEV9 243 aa21.66■■□□□ 1.06
COL20A1-204ENST00000455906 PIBF1Q8WXW3 757 aa21.66■■□□□ 1.06
COL20A1-204ENST00000455906 NECAB3Q96P71 396 aaPredicted RBP21.66■■□□□ 1.06
COL20A1-204ENST00000455906 ZBED2Q9BTP6 218 aa21.66■■□□□ 1.06
COL20A1-204ENST00000455906 SIP14410 1827 aa21.65■■□□□ 1.06
COL20A1-204ENST00000455906 SPATA31C2B4DYI2 1134 aa21.65■■□□□ 1.06
COL20A1-204ENST00000455906 H3BRB1 525 aa21.65■■□□□ 1.06
COL20A1-204ENST00000455906 EFCAB14O75071 495 aa21.65■■□□□ 1.06
COL20A1-204ENST00000455906 LGR5O75473 907 aa21.65■■□□□ 1.06
COL20A1-204ENST00000455906 LGALS2P05162 132 aa21.65■■□□□ 1.06
COL20A1-204ENST00000455906 KCNQ1P51787 676 aa21.65■■□□□ 1.06
COL20A1-204ENST00000455906 IKBKEQ14164 716 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms