RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 FAM160A1Q05DH4 1040 aa17.81■□□□□ 0.44
SNX17-204ENST00000453453 BAATQ14032 418 aaPredicted RBP17.81■□□□□ 0.44
SNX17-204ENST00000453453 CCAR1Q8IX12 1150 aaKnown RBP17.81■□□□□ 0.44
SNX17-204ENST00000453453 ANKRD35Q8N283 1001 aa17.81■□□□□ 0.44
SNX17-204ENST00000453453 MOV10L1Q9BXT6 1211 aaKnown RBP17.81■□□□□ 0.44
SNX17-204ENST00000453453 DDX25Q9UHL0 483 aaKnown RBP17.81■□□□□ 0.44
SNX17-204ENST00000453453 FBXO2Q9UK22 296 aaPredicted RBP17.81■□□□□ 0.44
SNX17-204ENST00000453453 MARCH6O60337 910 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 KINO60870 393 aaKnown RBP17.8■□□□□ 0.44
SNX17-204ENST00000453453 TDP2O95551 362 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 OR52Z1P0C646 297 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 PRPHP41219 470 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 CALCRLQ16602 461 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 SLC30A10Q6XR72 485 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 FSIP1Q8NA03 581 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 ZNF579Q8NAF0 562 aaKnown RBP17.8■□□□□ 0.44
SNX17-204ENST00000453453 SHCBP1Q8NEM2 672 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 GPRC5AQ8NFJ5 357 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 PTPN18Q99952 460 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 MROH8Q9H579 483 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 CYP3A7-CYP3A51PA0A087WV96 503 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 CMA1P23946 247 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 CYP3A7P24462 503 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 AXDND1Q5T1B0 1012 aaPredicted RBP17.8■□□□□ 0.44
SNX17-204ENST00000453453 POTEEQ6S8J3 1075 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 DTHD1Q6ZMT9 781 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 CRYGNQ8WXF5 182 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 TXNRD2Q9NNW7 524 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 A1CFQ9NQ94 594 aaKnown RBP17.8■□□□□ 0.44
SNX17-204ENST00000453453 CYP39A1Q9NYL5 469 aa17.8■□□□□ 0.44
SNX17-204ENST00000453453 RPTORQ8N122 1335 aa17.79■□□□□ 0.44
SNX17-204ENST00000453453 FAM155AB1AL88 458 aaPredicted RBP17.79■□□□□ 0.44
SNX17-204ENST00000453453 ERCC3P19447 782 aa17.79■□□□□ 0.44
SNX17-204ENST00000453453 BMS1Q14692 1282 aaKnown RBP17.79■□□□□ 0.44
SNX17-204ENST00000453453 TMEM266Q2M3C6 531 aa17.79■□□□□ 0.44
SNX17-204ENST00000453453 ARHGEF16Q5VV41 709 aa17.79■□□□□ 0.44
SNX17-204ENST00000453453 C11orf57Q6ZUT1 292 aaPredicted RBP17.79■□□□□ 0.44
SNX17-204ENST00000453453 POTEDQ86YR6 584 aa17.79■□□□□ 0.44
SNX17-204ENST00000453453 C4orf32Q8N8J7 132 aa17.79■□□□□ 0.44
SNX17-204ENST00000453453 ENGASEQ8NFI3 743 aa17.79■□□□□ 0.44
SNX17-204ENST00000453453 CLIC6Q96NY7 704 aa17.79■□□□□ 0.44
SNX17-204ENST00000453453 RMDN3Q96TC7 470 aa17.79■□□□□ 0.44
SNX17-204ENST00000453453 CREBZFQ9NS37 354 aa17.79■□□□□ 0.44
SNX17-204ENST00000453453 COL20A1Q9P218 1284 aa17.79■□□□□ 0.44
SNX17-204ENST00000453453 MORF4L1Q9UBU8 362 aa17.79■□□□□ 0.44
SNX17-204ENST00000453453 ZNF215Q9UL58 517 aaPredicted RBP17.79■□□□□ 0.44
SNX17-204ENST00000453453 FRMPD4Q14CM0 1322 aa17.78■□□□□ 0.44
SNX17-204ENST00000453453 VWA3AA6NCI4 1184 aa17.78■□□□□ 0.44
SNX17-204ENST00000453453 PEX10O60683 326 aa17.78■□□□□ 0.44
SNX17-204ENST00000453453 CIITAP33076 1130 aa17.78■□□□□ 0.44
SNX17-204ENST00000453453 LONP1P36776 959 aaKnown RBP17.78■□□□□ 0.44
SNX17-204ENST00000453453 APLP1P51693 650 aa17.78■□□□□ 0.44
SNX17-204ENST00000453453 GRM1Q13255 1194 aa17.78■□□□□ 0.44
SNX17-204ENST00000453453 TAF1CQ15572 869 aaPredicted RBP17.78■□□□□ 0.44
SNX17-204ENST00000453453 KMT5BQ4FZB7 885 aa17.78■□□□□ 0.44
SNX17-204ENST00000453453 Q4G0T1 1027 aa17.78■□□□□ 0.44
SNX17-204ENST00000453453 WDR78Q5VTH9 848 aa17.78■□□□□ 0.44
SNX17-204ENST00000453453 IFNL1Q8IU54 200 aa17.78■□□□□ 0.44
SNX17-204ENST00000453453 DHX40Q8IX18 779 aaKnown RBP17.78■□□□□ 0.44
SNX17-204ENST00000453453 ANKRD13CQ8N6S4 541 aa17.78■□□□□ 0.44
SNX17-204ENST00000453453 MBOAT7Q96N66 472 aa17.78■□□□□ 0.44
SNX17-204ENST00000453453 TMEM60Q9H2L4 133 aa17.78■□□□□ 0.44
SNX17-204ENST00000453453 SLC37A4O43826 429 aa17.77■□□□□ 0.44
SNX17-204ENST00000453453 H2AFXP16104 143 aaPredicted RBP17.77■□□□□ 0.44
SNX17-204ENST00000453453 TPM4P67936 248 aa17.77■□□□□ 0.44
SNX17-204ENST00000453453 UBXN2AP68543 259 aa17.77■□□□□ 0.44
SNX17-204ENST00000453453 KCTD2Q14681 263 aa17.77■□□□□ 0.44
SNX17-204ENST00000453453 PRR16Q569H4 304 aa17.77■□□□□ 0.44
SNX17-204ENST00000453453 RESP18Q5W5W9 173 aa17.77■□□□□ 0.44
SNX17-204ENST00000453453 PCNX4Q63HM2 1172 aa17.77■□□□□ 0.44
SNX17-204ENST00000453453 XRRA1Q6P2D8 792 aa17.77■□□□□ 0.44
SNX17-204ENST00000453453 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.77■□□□□ 0.44
SNX17-204ENST00000453453 NSUN6Q8TEA1 469 aaKnown RBP17.77■□□□□ 0.44
SNX17-204ENST00000453453 TAAR1Q96RJ0 339 aa17.77■□□□□ 0.44
SNX17-204ENST00000453453 RAB34Q9BZG1 259 aa17.77■□□□□ 0.44
SNX17-204ENST00000453453 PXMP2Q9NR77 195 aa17.77■□□□□ 0.44
SNX17-204ENST00000453453 CALCOCO1Q9P1Z2 691 aa17.77■□□□□ 0.44
SNX17-204ENST00000453453 IGF2BP3O00425 579 aaKnown RBP eCLIP17.76■□□□□ 0.43
SNX17-204ENST00000453453 EIF2AK2P19525 551 aaKnown RBP17.76■□□□□ 0.43
SNX17-204ENST00000453453 TXLNAP40222 546 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 SETQ01105 290 aaPredicted RBP17.76■□□□□ 0.43
SNX17-204ENST00000453453 NOGQ13253 232 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 FAM110CQ1W6H9 321 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 DEFB115Q30KQ5 88 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 Q3C1V9 767 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 SLFN12Q8IYM2 578 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 MMP19Q99542 508 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 SRRTQ9BXP5 876 aaKnown RBP17.76■□□□□ 0.43
SNX17-204ENST00000453453 CSRNP2Q9H175 543 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 ADD3Q9UEY8 706 aaKnown RBP17.76■□□□□ 0.43
SNX17-204ENST00000453453 RASSF10A6NK89 507 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 B4DLN1 442 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 POTEB2H3BUK9 544 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 TBX3O15119 743 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 ATP8B1O43520 1251 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 EDIL3O43854 480 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 FCER1AP12319 257 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 CCND2P30279 289 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 SNW1Q13573 536 aaKnown RBP17.76■□□□□ 0.43
SNX17-204ENST00000453453 PGM5Q15124 567 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms