RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 CIITAP33076 1130 aa16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 GJA9P57773 515 aa16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 NEDD9Q14511 834 aa16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 INF2Q27J81 1249 aa16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 NEK8Q86SG6 692 aa16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 ANKLE1Q8NAG6 615 aa16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 GIMAP8Q8ND71 665 aaPredicted RBP16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 OR6J1Q8NGC5 347 aa16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 CRYGNQ8WXF5 182 aa16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 LENG1Q96BZ8 264 aaPredicted RBP16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 NAP1L4Q99733 375 aaKnown RBP16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 MLXIPQ9HAP2 919 aa16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 LRRC37A2A6NM11 1700 aa16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 KBTBD13C9JR72 458 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 MEIS1O00470 390 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 ZEB2O60315 1214 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 LAMC2Q13753 1193 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 LRRC41Q15345 812 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 LETM2Q2VYF4 491 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 BRDTQ58F21 947 aaPredicted RBP16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 GNASQ5JWF2 1037 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 TMEM63BQ5T3F8 832 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 GJC2Q5T442 439 aaPredicted RBP16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 MCTP1Q6DN14 999 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 PLA2G4DQ86XP0 818 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 CYP2W1Q8TAV3 490 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 COPS5Q92905 334 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 TNFRSF25Q93038 417 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 SENP7Q9BQF6 1050 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 UPF3AQ9H1J1 476 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 SYNRGQ9UMZ2 1314 aa16.61■□□□□ 0.25
NCKIPSD-207ENST00000453349 FAM86B1E9PN63 330 aa16.6■□□□□ 0.25
NCKIPSD-207ENST00000453349 FAM86B2P0C5J1 330 aa16.6■□□□□ 0.25
NCKIPSD-207ENST00000453349 CPT1AP50416 773 aa16.6■□□□□ 0.25
NCKIPSD-207ENST00000453349 SETQ01105 290 aaPredicted RBP16.6■□□□□ 0.25
NCKIPSD-207ENST00000453349 SP2Q02086 613 aa16.6■□□□□ 0.25
NCKIPSD-207ENST00000453349 CELF3Q5SZQ8 465 aaKnown RBP16.6■□□□□ 0.25
NCKIPSD-207ENST00000453349 PCSK9Q8NBP7 692 aaKnown RBP16.6■□□□□ 0.25
NCKIPSD-207ENST00000453349 SPRYD3Q8NCJ5 442 aa16.6■□□□□ 0.25
NCKIPSD-207ENST00000453349 TSEN34Q9BSV6 310 aaKnown RBP16.6■□□□□ 0.25
NCKIPSD-207ENST00000453349 KCNH7Q9NS40 1196 aa16.6■□□□□ 0.25
NCKIPSD-207ENST00000453349 KIAA1217Q5T5P2 1943 aa16.6■□□□□ 0.25
NCKIPSD-207ENST00000453349 CYP3A7-CYP3A51PA0A087WV96 503 aa16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 DNM1LO00429 736 aa16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 CCNT1O60563 726 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 ADAMTS4O75173 837 aa16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 GGPS1O95749 300 aa16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 ARP10275 920 aa16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 CYP3A7P24462 503 aa16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 U2AF2P26368 475 aaKnown RBP eCLIP16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 NKX3-2P78367 333 aa16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 SEMA3FQ13275 785 aa16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 FSCN1Q16658 493 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 PRR16Q569H4 304 aa16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 EARS2Q5JPH6 523 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 MOXD1Q6UVY6 613 aa16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 NOSTRINQ8IVI9 506 aa16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 KLHDC9Q8NEP7 349 aa16.59■□□□□ 0.25
NCKIPSD-207ENST00000453349 IGLV3-22A0A075B6J6 115 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 SORBS3O60504 671 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 ATP9AO75110 1047 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 CAPN15O75808 1086 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 PDIA4P13667 645 aaKnown RBP16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 GCFC2P16383 781 aaKnown RBP16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 UBA1P22314 1058 aaKnown RBP16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 CST5P28325 142 aaPredicted RBP16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 BEX3Q00994 111 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 ARHGAP1Q07960 439 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 KCNA10Q16322 511 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 Q4G0T1 1027 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 MYSM1Q5VVJ2 828 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 PPP4R3AQ6IN85 833 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 CYFIP1Q7L576 1253 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 EMID1Q96A84 441 aaPredicted RBP16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 SPATA33Q96N06 139 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 SDF4Q9BRK5 362 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 ZNF577Q9BSK1 485 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 AGO4Q9HCK5 861 aaKnown RBP16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 PKD2L1Q9P0L9 805 aa16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 NOL7Q9UMY1 257 aaKnown RBP16.58■□□□□ 0.24
NCKIPSD-207ENST00000453349 VPS37CA5D8V6 355 aaPredicted RBP16.57■□□□□ 0.24
NCKIPSD-207ENST00000453349 FAM205CA6NFA0 338 aa16.57■□□□□ 0.24
NCKIPSD-207ENST00000453349 MOXD2PA6NHM9 499 aa16.57■□□□□ 0.24
NCKIPSD-207ENST00000453349 EDIL3O43854 480 aa16.57■□□□□ 0.24
NCKIPSD-207ENST00000453349 KPNA6O60684 536 aa16.57■□□□□ 0.24
NCKIPSD-207ENST00000453349 FARP2O94887 1054 aaPredicted RBP16.57■□□□□ 0.24
NCKIPSD-207ENST00000453349 SYT1P21579 422 aa16.57■□□□□ 0.24
NCKIPSD-207ENST00000453349 PTGS1P23219 599 aa16.57■□□□□ 0.24
NCKIPSD-207ENST00000453349 METTL7BQ6UX53 244 aa16.57■□□□□ 0.24
NCKIPSD-207ENST00000453349 NECAB2Q7Z6G3 386 aa16.57■□□□□ 0.24
NCKIPSD-207ENST00000453349 POLR3EQ9NVU0 708 aa16.57■□□□□ 0.24
NCKIPSD-207ENST00000453349 DDX25Q9UHL0 483 aaKnown RBP16.57■□□□□ 0.24
NCKIPSD-207ENST00000453349 NFASCO94856 1347 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 MYADML2A6NDP7 307 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 A6NJR5 290 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 KIF28PB7ZC32 967 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 IPO5O00410 1097 aaKnown RBP16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 NOP56O00567 594 aaKnown RBP16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 CTAGE5O15320 804 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 MARCH6O60337 910 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms