RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 CXCL10P02778 98 aa12.66□□□□□ -0.38
USP1-204ENST00000452143 PSEN2P49810 448 aa12.66□□□□□ -0.38
USP1-204ENST00000452143 WDR5P61964 334 aaKnown RBP12.66□□□□□ -0.38
USP1-204ENST00000452143 TAP1Q03518 808 aa12.66□□□□□ -0.38
USP1-204ENST00000452143 CNKSR3Q6P9H4 555 aa12.66□□□□□ -0.38
USP1-204ENST00000452143 STOX1Q6ZVD7 989 aa12.66□□□□□ -0.38
USP1-204ENST00000452143 MICALL1Q8N3F8 863 aa12.66□□□□□ -0.38
USP1-204ENST00000452143 DHX38Q92620 1227 aaKnown RBP12.66□□□□□ -0.38
USP1-204ENST00000452143 PDCD2LQ9BRP1 358 aa12.66□□□□□ -0.38
USP1-204ENST00000452143 TCF20Q9UGU0 1960 aaKnown RBP12.66□□□□□ -0.38
USP1-204ENST00000452143 BAZ2BQ9UIF8 2168 aaKnown RBP12.65□□□□□ -0.38
USP1-204ENST00000452143 TLL1O43897 1013 aa12.65□□□□□ -0.38
USP1-204ENST00000452143 TGFB3P10600 412 aa12.65□□□□□ -0.38
USP1-204ENST00000452143 CKBP12277 381 aa12.65□□□□□ -0.38
USP1-204ENST00000452143 TRDNQ13061 729 aa12.65□□□□□ -0.38
USP1-204ENST00000452143 PTK7Q13308 1070 aa12.65□□□□□ -0.38
USP1-204ENST00000452143 MFSD10Q14728 455 aa12.65□□□□□ -0.38
USP1-204ENST00000452143 SEC23AQ15436 765 aa12.65□□□□□ -0.38
USP1-204ENST00000452143 DHX37Q8IY37 1157 aaKnown RBP12.65□□□□□ -0.38
USP1-204ENST00000452143 STAG2Q8N3U4 1231 aa12.65□□□□□ -0.38
USP1-204ENST00000452143 ARNTL2Q8WYA1 636 aa12.65□□□□□ -0.38
USP1-204ENST00000452143 VAT1LQ9HCJ6 419 aa12.65□□□□□ -0.38
USP1-204ENST00000452143 HDAC6Q9UBN7 1215 aa12.65□□□□□ -0.38
USP1-204ENST00000452143 MAD2L2Q9UI95 211 aa12.65□□□□□ -0.38
USP1-204ENST00000452143 COG5Q9UP83 839 aa12.65□□□□□ -0.38
USP1-204ENST00000452143 PCDHA1Q9Y5I3 950 aa12.65□□□□□ -0.38
USP1-204ENST00000452143 EMSYQ7Z589 1322 aa12.64□□□□□ -0.39
USP1-204ENST00000452143 ABHD14A-ACY1A0A1B0GW23 586 aa12.64□□□□□ -0.39
USP1-204ENST00000452143 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
USP1-204ENST00000452143 EPOPA6NHQ4 379 aa12.64□□□□□ -0.39
USP1-204ENST00000452143 PPP1R11O60927 126 aaPredicted RBP12.64□□□□□ -0.39
USP1-204ENST00000452143 PPFIA4O75335 1185 aa12.64□□□□□ -0.39
USP1-204ENST00000452143 RGS20O76081 388 aa12.64□□□□□ -0.39
USP1-204ENST00000452143 ZNF286BP0CG31 522 aa12.64□□□□□ -0.39
USP1-204ENST00000452143 GPNMBQ14956 572 aa12.64□□□□□ -0.39
USP1-204ENST00000452143 PGM5Q15124 567 aa12.64□□□□□ -0.39
USP1-204ENST00000452143 SKIV2LQ15477 1246 aaKnown RBP12.64□□□□□ -0.39
USP1-204ENST00000452143 KIAA0753Q2KHM9 967 aa12.64□□□□□ -0.39
USP1-204ENST00000452143 MYSM1Q5VVJ2 828 aa12.64□□□□□ -0.39
USP1-204ENST00000452143 VSIG10LQ86VR7 867 aa12.64□□□□□ -0.39
USP1-204ENST00000452143 CERS4Q9HA82 394 aa12.64□□□□□ -0.39
USP1-204ENST00000452143 NBNO60934 754 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 ARHGEF15O94989 841 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 GJB5O95377 273 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 GGPS1O95749 300 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 BMP1P13497 986 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 UBA1P22314 1058 aaKnown RBP12.63□□□□□ -0.39
USP1-204ENST00000452143 CCND2P30279 289 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 TFF2Q03403 129 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 GRB10Q13322 594 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 GRM4Q14833 912 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 SART3Q15020 963 aaKnown RBP12.63□□□□□ -0.39
USP1-204ENST00000452143 TRIM71Q2Q1W2 868 aaKnown RBP12.63□□□□□ -0.39
USP1-204ENST00000452143 HSDL1Q3SXM5 330 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 CELF3Q5SZQ8 465 aaKnown RBP12.63□□□□□ -0.39
USP1-204ENST00000452143 SPATA33Q96N06 139 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 ALG1Q9BT22 464 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 ZBED2Q9BTP6 218 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 IL25Q9H293 177 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 RIOX1Q9H6W3 641 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 LMCD1Q9NZU5 365 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 COL4A6Q14031 1691 aa12.63□□□□□ -0.39
USP1-204ENST00000452143 FRMPD4Q14CM0 1322 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 DOCK5Q9H7D0 1870 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 ERICH2A1L162 156 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 GCOM1H8Y6P7 765 aaPredicted RBP12.62□□□□□ -0.39
USP1-204ENST00000452143 RFXAPO00287 272 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 LPXNO60711 386 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 STAM2O75886 525 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 POLR2MP0CAP2 368 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 MYCLP12524 364 aaPredicted RBP12.62□□□□□ -0.39
USP1-204ENST00000452143 HOXA13P31271 388 aaPredicted RBP12.62□□□□□ -0.39
USP1-204ENST00000452143 DEFB103AP81534 67 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 IKBKEQ14164 716 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 TRAF7Q6Q0C0 670 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 CYB5R4Q7L1T6 521 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 RALYLQ86SE5 291 aaKnown RBP12.62□□□□□ -0.39
USP1-204ENST00000452143 SERINC5Q86VE9 423 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 HOMER1Q86YM7 354 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 EXOC6Q8TAG9 804 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 RUFY2Q8WXA3 655 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 RAD9AQ99638 391 aa12.62□□□□□ -0.39
USP1-204ENST00000452143 PNMA6FA0A0J9YX94 578 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 LCHNA4D1U4 455 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 CAND2O75155 1236 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 LGR5O75473 907 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 CYP21A2P08686 494 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 GSPT1P15170 499 aaKnown RBP12.61□□□□□ -0.39
USP1-204ENST00000452143 COL9A1P20849 921 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 HOXC8P31273 242 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 KCNQ1P51787 676 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 TROAPQ12815 778 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 GNPTABQ3T906 1256 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 ZNF618Q5T7W0 954 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 TTC22Q5TAA0 569 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 IL31RAQ8NI17 732 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 HLA-CQ95604 372 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 PIGSQ96S52 555 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 C16orf70Q9BSU1 422 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 RALGAPA2Q2PPJ7 1873 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms