RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 KCNK18Q7Z418 384 aa21.02■□□□□ 0.96
TNFRSF8-202ENST00000413146 SLF2Q8IX21 1173 aa21.02■□□□□ 0.96
TNFRSF8-202ENST00000413146 CCDC155Q8N6L0 562 aa21.02■□□□□ 0.96
TNFRSF8-202ENST00000413146 PPFIA4O75335 1185 aa21.02■□□□□ 0.96
TNFRSF8-202ENST00000413146 RHBDL3P58872 404 aa21.02■□□□□ 0.96
TNFRSF8-202ENST00000413146 GPSM2P81274 684 aa21.02■□□□□ 0.96
TNFRSF8-202ENST00000413146 RASSF7Q02833 373 aa21.02■□□□□ 0.96
TNFRSF8-202ENST00000413146 CCDC40Q4G0X9 1142 aa21.02■□□□□ 0.96
TNFRSF8-202ENST00000413146 ANKRD13CQ8N6S4 541 aa21.02■□□□□ 0.96
TNFRSF8-202ENST00000413146 GLIS3Q8NEA6 775 aa21.02■□□□□ 0.96
TNFRSF8-202ENST00000413146 CCNL1Q9UK58 526 aaPredicted RBP21.02■□□□□ 0.96
TNFRSF8-202ENST00000413146 COL4A3BPQ9Y5P4 624 aa21.02■□□□□ 0.96
TNFRSF8-202ENST00000413146 BTAF1O14981 1849 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 NCK2O43639 380 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 SLC1A4P43007 532 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 EPHB4P54760 987 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 NAP1L1P55209 391 aaKnown RBP21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 ASTE1Q2TB18 679 aaPredicted RBP21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 ARHGAP27Q6ZUM4 889 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 AMIGO3Q86WK7 504 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 LRRC47Q8N1G4 583 aaKnown RBP21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 CNBD1Q8NA66 436 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 NUCKS1Q9H1E3 243 aaKnown RBP21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 STIM2Q9P246 746 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 SALL4Q9UJQ4 1053 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 TSKSQ9UJT2 592 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 PLIN4Q96Q06 1357 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 FKBP3Q00688 224 aaKnown RBP21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 SLC7A5Q01650 507 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 COASYQ13057 564 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 SLC9C1Q4G0N8 1177 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 RNF10Q8N5U6 811 aaKnown RBP21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 NLRC4Q9NPP4 1024 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 CEP72Q9P209 647 aa21.01■□□□□ 0.95
TNFRSF8-202ENST00000413146 TRAF5O00463 557 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 EDIL3O43854 480 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 HSPA1LP34931 641 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 RFC4P35249 363 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 SEPT2Q15019 361 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 VPS72Q15906 364 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 MFSD14BQ5SR56 506 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 C8orf74Q6P047 294 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 MTMR8Q96EF0 704 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 LUC7LQ9NQ29 371 aaKnown RBP21■□□□□ 0.95
TNFRSF8-202ENST00000413146 MTMR4Q9NYA4 1195 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 SMARCAL1Q9NZC9 954 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 EHD2Q9NZN4 543 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 FOCADQ5VW36 1801 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 BUB1O43683 1085 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 MARCH6O60337 910 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 KCNMA1Q12791 1236 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 SFMBT2Q5VUG0 894 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 HGSNATQ68CP4 663 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 HAUS3Q68CZ6 603 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 PPP4R3AQ6IN85 833 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 PPP1R18Q6NYC8 613 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 RPGRQ92834 1020 aaKnown RBP21■□□□□ 0.95
TNFRSF8-202ENST00000413146 TLR10Q9BXR5 811 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 TRIM34Q9BYJ4 488 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 GPCPD1Q9NPB8 672 aa21■□□□□ 0.95
TNFRSF8-202ENST00000413146 IL1R1P14778 569 aa20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 MRPS25P82663 173 aaKnown RBP20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 ZCWPW2Q504Y3 356 aa20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 FAM26FQ5R3K3 315 aa20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 EMBQ6PCB8 327 aa20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 FAM163AQ96GL9 167 aaPredicted RBP20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 PANK4Q9NVE7 773 aa20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 DDX25Q9UHL0 483 aaKnown RBP20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 RBAK-RBAKDNI3L0D1 243 aa20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 SHOX2O60902 331 aaPredicted RBP20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 SERPING1P05155 500 aa20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 ATP2B4P23634 1241 aa20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 UBE2SQ16763 222 aa20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 KLHDC7AQ5VTJ3 777 aa20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 DNAJC19Q96DA6 116 aa20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 PLEKHA4Q9H4M7 779 aa20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 BMP2KQ9NSY1 1161 aaPredicted RBP20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 GGA1Q9UJY5 639 aa20.99■□□□□ 0.95
TNFRSF8-202ENST00000413146 GAKO14976 1311 aa20.98■□□□□ 0.95
TNFRSF8-202ENST00000413146 GOLGA8KD6RF30 607 aa20.98■□□□□ 0.95
TNFRSF8-202ENST00000413146 OPA1O60313 960 aa20.98■□□□□ 0.95
TNFRSF8-202ENST00000413146 EIF6P56537 245 aaKnown RBP20.98■□□□□ 0.95
TNFRSF8-202ENST00000413146 CFAP221Q4G0U5 840 aa20.98■□□□□ 0.95
TNFRSF8-202ENST00000413146 SYN2Q92777 582 aaPredicted RBP20.98■□□□□ 0.95
TNFRSF8-202ENST00000413146 RUFY1Q96T51 708 aa20.98■□□□□ 0.95
TNFRSF8-202ENST00000413146 PNMA6FA0A0J9YX94 578 aa20.97■□□□□ 0.95
TNFRSF8-202ENST00000413146 SSBP05455 408 aaKnown RBP eCLIP20.97■□□□□ 0.95
TNFRSF8-202ENST00000413146 TNFRSF8P28908 595 aa20.97■□□□□ 0.95
TNFRSF8-202ENST00000413146 ECM1Q16610 540 aa20.97■□□□□ 0.95
TNFRSF8-202ENST00000413146 FAM83BQ5T0W9 1011 aa20.97■□□□□ 0.95
TNFRSF8-202ENST00000413146 CEP63Q96MT8 703 aa20.97■□□□□ 0.95
TNFRSF8-202ENST00000413146 LSM14BQ9BX40 385 aaKnown RBP20.97■□□□□ 0.95
TNFRSF8-202ENST00000413146 RBM12Q9NTZ6 932 aaKnown RBP20.97■□□□□ 0.95
TNFRSF8-202ENST00000413146 KDM3AQ9Y4C1 1321 aa20.97■□□□□ 0.95
TNFRSF8-202ENST00000413146 MYH7BA7E2Y1 1941 aa20.97■□□□□ 0.95
TNFRSF8-202ENST00000413146 SNHG28P0DPA3 235 aa20.97■□□□□ 0.95
TNFRSF8-202ENST00000413146 PPFIA1Q13136 1202 aa20.97■□□□□ 0.95
TNFRSF8-202ENST00000413146 GLE1Q53GS7 698 aaKnown RBP20.97■□□□□ 0.95
TNFRSF8-202ENST00000413146 CUL5Q93034 780 aa20.97■□□□□ 0.95
TNFRSF8-202ENST00000413146 NT5C3AQ9H0P0 336 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms