RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PYCARDQ9ULZ3 195 aa21.75■■□□□ 1.07
PDLIM2-204ENST00000397760 IGLV3-22A0A075B6J6 115 aa21.74■■□□□ 1.07
PDLIM2-204ENST00000397760 TBX3O15119 743 aa21.74■■□□□ 1.07
PDLIM2-204ENST00000397760 PGM5Q15124 567 aa21.74■■□□□ 1.07
PDLIM2-204ENST00000397760 PCNX4Q63HM2 1172 aa21.74■■□□□ 1.07
PDLIM2-204ENST00000397760 SLFN12Q8IYM2 578 aa21.74■■□□□ 1.07
PDLIM2-204ENST00000397760 ETNPPLQ8TBG4 499 aa21.74■■□□□ 1.07
PDLIM2-204ENST00000397760 GJA10Q969M2 543 aa21.74■■□□□ 1.07
PDLIM2-204ENST00000397760 UIMC1Q96RL1 719 aa21.74■■□□□ 1.07
PDLIM2-204ENST00000397760 PDCD2LQ9BRP1 358 aa21.74■■□□□ 1.07
PDLIM2-204ENST00000397760 NAT10Q9H0A0 1025 aaKnown RBP21.74■■□□□ 1.07
PDLIM2-204ENST00000397760 PFASO15067 1338 aa21.74■■□□□ 1.07
PDLIM2-204ENST00000397760 FAM155AB1AL88 458 aaPredicted RBP21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 POLR2DO15514 142 aaKnown RBP21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 CDC25AP30304 524 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 ANKRD13CQ8N6S4 541 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 PDILTQ8N807 584 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 IGSF22Q8N9C0 903 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 ZNF784Q8NCA9 323 aaPredicted RBP21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 NSUN6Q8TEA1 469 aaKnown RBP21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 HHIPL1Q96JK4 782 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 SDF4Q9BRK5 362 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 R3HDMLQ9H3Y0 253 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 PCDHA12Q9UN75 941 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 PP2D1A8MPX8 630 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 MSH4O15457 936 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 PTGS1P23219 599 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 TXLNAP40222 546 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 INHBEP58166 350 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 PDIA5Q14554 519 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 CCDC186Q7Z3E2 898 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 FAM20AQ96MK3 541 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 TIGD1Q96MW7 591 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 MXRA8Q9BRK3 442 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 RAB34Q9BZG1 259 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 MROH8Q9H579 483 aa21.73■■□□□ 1.07
PDLIM2-204ENST00000397760 A0A087X0B3 334 aa21.72■■□□□ 1.07
PDLIM2-204ENST00000397760 IGF2BP3O00425 579 aaKnown RBP eCLIP21.72■■□□□ 1.07
PDLIM2-204ENST00000397760 MEIS1O00470 390 aa21.72■■□□□ 1.07
PDLIM2-204ENST00000397760 MYCLP12524 364 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-204ENST00000397760 UBA7P41226 1012 aa21.72■■□□□ 1.07
PDLIM2-204ENST00000397760 CCNA1P78396 465 aa21.72■■□□□ 1.07
PDLIM2-204ENST00000397760 LONRF3Q496Y0 759 aa21.72■■□□□ 1.07
PDLIM2-204ENST00000397760 DRC7Q8IY82 874 aa21.72■■□□□ 1.07
PDLIM2-204ENST00000397760 CEP57L1Q8IYX8 460 aa21.72■■□□□ 1.07
PDLIM2-204ENST00000397760 SHCBP1Q8NEM2 672 aa21.72■■□□□ 1.07
PDLIM2-204ENST00000397760 LRWD1Q9UFC0 647 aa21.72■■□□□ 1.07
PDLIM2-204ENST00000397760 ITGB5P18084 799 aa21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 MRPS9P82933 396 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 SETQ01105 290 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 WDR78Q5VTH9 848 aa21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.71■■□□□ 1.075e-6■■■□□ 17.2
PDLIM2-204ENST00000397760 BPIFA3Q9BQP9 254 aa21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 CCSER1Q9C0I3 900 aa21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 ZCCHC17Q9NP64 241 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 MORF4L1Q9UBU8 362 aa21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 NR3C2P08235 984 aa21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 CNTN2Q02246 1040 aa21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 XRRA1Q6P2D8 792 aa21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 KRBA2Q6ZNG9 492 aa21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 PAXIP1Q6ZW49 1069 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 CNNM3Q8NE01 707 aa21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 PORCNQ9H237 461 aa21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 UBIAD1Q9Y5Z9 338 aa21.71■■□□□ 1.07
PDLIM2-204ENST00000397760 RBBP6Q7Z6E9 1792 aaKnown RBP21.7■■□□□ 1.07
PDLIM2-204ENST00000397760 POTEMA6NI47 508 aa21.7■■□□□ 1.06
PDLIM2-204ENST00000397760 POTEB2H3BUK9 544 aa21.7■■□□□ 1.06
PDLIM2-204ENST00000397760 ARP10275 920 aa21.7■■□□□ 1.06
PDLIM2-204ENST00000397760 CCND2P30279 289 aa21.7■■□□□ 1.06
PDLIM2-204ENST00000397760 NIPA1Q7RTP0 329 aa21.7■■□□□ 1.06
PDLIM2-204ENST00000397760 VSIG10LQ86VR7 867 aa21.7■■□□□ 1.06
PDLIM2-204ENST00000397760 IFNL1Q8IU54 200 aa21.7■■□□□ 1.06
PDLIM2-204ENST00000397760 DNERQ8NFT8 737 aa21.7■■□□□ 1.06
PDLIM2-204ENST00000397760 DHX58Q96C10 678 aa21.7■■□□□ 1.06
PDLIM2-204ENST00000397760 MMP19Q99542 508 aa21.7■■□□□ 1.06
PDLIM2-204ENST00000397760 EFCC1Q9HA90 598 aa21.7■■□□□ 1.06
PDLIM2-204ENST00000397760 SERTAD1Q9UHV2 236 aa21.7■■□□□ 1.06
PDLIM2-204ENST00000397760 BECN2A8MW95 431 aa21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 KCTD2Q14681 263 aa21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 C11orf57Q6ZUT1 292 aaPredicted RBP21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 CABP7Q86V35 215 aa21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 PYM1Q9BRP8 204 aaKnown RBP21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 WDR11Q9BZH6 1224 aa21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 JADE2Q9NQC1 790 aa21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 BCRP11274 1271 aa21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 FCER1AP12319 257 aa21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 SREBF2Q12772 1141 aa21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 GRM1Q13255 1194 aa21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 DHX8Q14562 1220 aaKnown RBP21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 KARSQ15046 597 aaKnown RBP21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 C17orf53Q8N3J3 647 aaPredicted RBP21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 RASSF8Q8NHQ8 419 aa21.69■■□□□ 1.06
PDLIM2-204ENST00000397760 ACTN4O43707 911 aaKnown RBP21.68■■□□□ 1.06
PDLIM2-204ENST00000397760 TAF1CQ15572 869 aaPredicted RBP21.68■■□□□ 1.06
PDLIM2-204ENST00000397760 CYP4F22Q6NT55 531 aa21.68■■□□□ 1.06
PDLIM2-204ENST00000397760 IQUBQ8NA54 791 aa21.68■■□□□ 1.06
PDLIM2-204ENST00000397760 SLC5A5Q92911 643 aa21.68■■□□□ 1.06
PDLIM2-204ENST00000397760 IWS1Q96ST2 819 aa21.68■■□□□ 1.06
PDLIM2-204ENST00000397760 ZNF577Q9BSK1 485 aa21.68■■□□□ 1.06
PDLIM2-204ENST00000397760 MMTAG2Q9BU76 263 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms