RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 HAS3O00219 553 aa21.77■■□□□ 1.08
MCF2L-207ENST00000397024 PITPNM1O00562 1244 aa21.77■■□□□ 1.08
MCF2L-207ENST00000397024 UBA1P22314 1058 aaKnown RBP21.77■■□□□ 1.08
MCF2L-207ENST00000397024 LIFRP42702 1097 aa21.77■■□□□ 1.08
MCF2L-207ENST00000397024 GPNMBQ14956 572 aa21.77■■□□□ 1.08
MCF2L-207ENST00000397024 KCNV1Q6PIU1 500 aa21.77■■□□□ 1.08
MCF2L-207ENST00000397024 RETREG2Q8NC44 543 aa21.77■■□□□ 1.08
MCF2L-207ENST00000397024 SPATA33Q96N06 139 aa21.77■■□□□ 1.08
MCF2L-207ENST00000397024 MTIF3Q9H2K0 278 aaKnown RBP21.77■■□□□ 1.08
MCF2L-207ENST00000397024 NKX2-4Q9H2Z4 354 aa21.77■■□□□ 1.08
MCF2L-207ENST00000397024 NOD1Q9Y239 953 aa21.77■■□□□ 1.08
MCF2L-207ENST00000397024 FRMPD4Q14CM0 1322 aa21.77■■□□□ 1.07
MCF2L-207ENST00000397024 hCG_1642624A0A1W2PR95 340 aa21.76■■□□□ 1.07
MCF2L-207ENST00000397024 ZBBXA8MT70 800 aa21.76■■□□□ 1.07
MCF2L-207ENST00000397024 MEIS2O14770 477 aa21.76■■□□□ 1.07
MCF2L-207ENST00000397024 PPFIA4O75335 1185 aa21.76■■□□□ 1.07
MCF2L-207ENST00000397024 F2P00734 622 aa21.76■■□□□ 1.07
MCF2L-207ENST00000397024 TGFB3P10600 412 aa21.76■■□□□ 1.07
MCF2L-207ENST00000397024 MYOGP15173 224 aa21.76■■□□□ 1.07
MCF2L-207ENST00000397024 BFSP2Q13515 415 aa21.76■■□□□ 1.07
MCF2L-207ENST00000397024 HIC1Q14526 733 aa21.76■■□□□ 1.07
MCF2L-207ENST00000397024 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.76■■□□□ 1.07
MCF2L-207ENST00000397024 LZTS2Q9BRK4 669 aa21.76■■□□□ 1.07
MCF2L-207ENST00000397024 RTEL1Q9NZ71 1219 aa21.76■■□□□ 1.07
MCF2L-207ENST00000397024 GTF2IRD1Q9UHL9 959 aa21.76■■□□□ 1.07
MCF2L-207ENST00000397024 MSRAQ9UJ68 235 aa21.76■■□□□ 1.07
MCF2L-207ENST00000397024 ZNF200P98182 395 aaPredicted RBP21.75■■□□□ 1.07
MCF2L-207ENST00000397024 SEMA3FQ13275 785 aa21.75■■□□□ 1.07
MCF2L-207ENST00000397024 MFSD10Q14728 455 aa21.75■■□□□ 1.07
MCF2L-207ENST00000397024 RAB30Q15771 203 aa21.75■■□□□ 1.07
MCF2L-207ENST00000397024 KIAA0753Q2KHM9 967 aa21.75■■□□□ 1.07
MCF2L-207ENST00000397024 RASEFQ8IZ41 740 aa21.75■■□□□ 1.07
MCF2L-207ENST00000397024 CCDC82Q8N4S0 544 aa21.75■■□□□ 1.07
MCF2L-207ENST00000397024 C7orf31Q8N865 590 aa21.75■■□□□ 1.07
MCF2L-207ENST00000397024 PRDM12Q9H4Q4 367 aa21.75■■□□□ 1.07
MCF2L-207ENST00000397024 PFKMP08237 780 aa21.74■■□□□ 1.07
MCF2L-207ENST00000397024 RFC2P35250 354 aa21.74■■□□□ 1.07
MCF2L-207ENST00000397024 GNAQP50148 359 aa21.74■■□□□ 1.07
MCF2L-207ENST00000397024 EXOSC10Q01780 885 aaKnown RBP21.74■■□□□ 1.07
MCF2L-207ENST00000397024 FANCBQ8NB91 859 aa21.74■■□□□ 1.07
MCF2L-207ENST00000397024 WNT8BQ93098 351 aa21.74■■□□□ 1.07
MCF2L-207ENST00000397024 INPP4AQ96PE3 977 aaPredicted RBP21.74■■□□□ 1.07
MCF2L-207ENST00000397024 C16orf70Q9BSU1 422 aa21.74■■□□□ 1.07
MCF2L-207ENST00000397024 TELO2Q9Y4R8 837 aa21.74■■□□□ 1.07
MCF2L-207ENST00000397024 SLC12A7Q9Y666 1083 aa21.74■■□□□ 1.07
MCF2L-207ENST00000397024 SPATA31C2B4DYI2 1134 aa21.73■■□□□ 1.07
MCF2L-207ENST00000397024 PIK3CDO00329 1044 aa21.73■■□□□ 1.07
MCF2L-207ENST00000397024 ATP2A2P16615 1042 aaKnown RBP21.73■■□□□ 1.07
MCF2L-207ENST00000397024 ICAM3P32942 547 aa21.73■■□□□ 1.07
MCF2L-207ENST00000397024 SGMS1Q86VZ5 419 aa21.73■■□□□ 1.07
MCF2L-207ENST00000397024 TCEANC2Q96MN5 208 aa21.73■■□□□ 1.07
MCF2L-207ENST00000397024 FTOQ9C0B1 505 aaKnown RBP eCLIP21.73■■□□□ 1.07
MCF2L-207ENST00000397024 MLXIPQ9HAP2 919 aa21.73■■□□□ 1.07
MCF2L-207ENST00000397024 SEC63Q9UGP8 760 aaKnown RBP21.73■■□□□ 1.07
MCF2L-207ENST00000397024 CALM1P0DP23 149 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 CALM2P0DP24 149 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 CALM3P0DP25 149 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 ADGRE1Q14246 886 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 TRIM71Q2Q1W2 868 aaKnown RBP21.72■■□□□ 1.07
MCF2L-207ENST00000397024 ADCK5Q3MIX3 580 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 TMTC3Q6ZXV5 915 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 USP38Q8NB14 1042 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 SMARCC2Q8TAQ2 1214 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 CAGE1Q8TC20 777 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 AFAP1L1Q8TED9 768 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 NEK1Q96PY6 1258 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 KATNAL1Q9BW62 490 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 SLC28A3Q9HAS3 691 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 BRPF3Q9ULD4 1205 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 TANC1Q9C0D5 1861 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 REV3LO60673 3130 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 TRANK1O15050 2925 aa21.72■■□□□ 1.07
MCF2L-207ENST00000397024 DOCK5Q9H7D0 1870 aa21.71■■□□□ 1.07
MCF2L-207ENST00000397024 CKBP12277 381 aa21.71■■□□□ 1.07
MCF2L-207ENST00000397024 SELPP16109 830 aa21.71■■□□□ 1.07
MCF2L-207ENST00000397024 RBL2Q08999 1139 aa21.71■■□□□ 1.07
MCF2L-207ENST00000397024 TCTN1Q2MV58 587 aa21.71■■□□□ 1.07
MCF2L-207ENST00000397024 PCNX4Q63HM2 1172 aa21.71■■□□□ 1.07
MCF2L-207ENST00000397024 TRAF7Q6Q0C0 670 aa21.71■■□□□ 1.07
MCF2L-207ENST00000397024 CYFIP1Q7L576 1253 aa21.71■■□□□ 1.07
MCF2L-207ENST00000397024 CUL5Q93034 780 aa21.71■■□□□ 1.07
MCF2L-207ENST00000397024 PSTPIP2Q9H939 334 aa21.71■■□□□ 1.07
MCF2L-207ENST00000397024 PCDHA11Q9Y5I1 949 aa21.71■■□□□ 1.07
MCF2L-207ENST00000397024 STAM2O75886 525 aa21.7■■□□□ 1.06
MCF2L-207ENST00000397024 ACTN1P12814 892 aa21.7■■□□□ 1.06
MCF2L-207ENST00000397024 UBE2SQ16763 222 aa21.7■■□□□ 1.06
MCF2L-207ENST00000397024 TSGA10IPQ3SY00 556 aa21.7■■□□□ 1.06
MCF2L-207ENST00000397024 GNPTABQ3T906 1256 aa21.7■■□□□ 1.06
MCF2L-207ENST00000397024 RNF20Q5VTR2 975 aa21.7■■□□□ 1.06
MCF2L-207ENST00000397024 MICU3Q86XE3 530 aa21.7■■□□□ 1.06
MCF2L-207ENST00000397024 CCDC155Q8N6L0 562 aa21.7■■□□□ 1.06
MCF2L-207ENST00000397024 FIBPO43427 364 aa21.69■■□□□ 1.06
MCF2L-207ENST00000397024 NBNO60934 754 aa21.69■■□□□ 1.06
MCF2L-207ENST00000397024 CDC45O75419 566 aa21.69■■□□□ 1.06
MCF2L-207ENST00000397024 PTK7Q13308 1070 aa21.69■■□□□ 1.06
MCF2L-207ENST00000397024 APOA5Q6Q788 366 aa21.69■■□□□ 1.06
MCF2L-207ENST00000397024 LRRC8DQ7L1W4 858 aa21.69■■□□□ 1.06
MCF2L-207ENST00000397024 DHX32Q7L7V1 743 aaKnown RBP21.69■■□□□ 1.06
MCF2L-207ENST00000397024 COL25A1Q9BXS0 654 aaPredicted RBP21.69■■□□□ 1.06
MCF2L-207ENST00000397024 SPTBN5Q9NRC6 3674 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms