RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 TTC12Q9H892 705 aaPredicted RBP4.73□□□□□ -1.65
HERC4-204ENST00000395198 AATFQ9NY61 560 aaKnown RBP eCLIP4.73□□□□□ -1.65
HERC4-204ENST00000395198 ITIH6Q6UXX5 1313 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 A0A087WZG4 1122 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 FZD6O60353 706 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 RPSAP08865 295 aaKnown RBP4.72□□□□□ -1.65
HERC4-204ENST00000395198 NPR3P17342 541 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 CCT5P48643 541 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 TMEM62Q0P6H9 643 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 LRP8Q14114 963 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 CRY1Q16526 586 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 SH2D4BQ5SQS7 431 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 STXBP5Q5T5C0 1151 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 KIAA1211Q6ZU35 1233 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 RUFY3Q7L099 469 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 HID1Q8IV36 788 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 MAP4K3Q8IVH8 894 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 FAM186BQ8IYM0 893 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 MYCT1Q8N699 235 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 TMCO5AQ8N6Q1 288 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 OR52K2Q8NGK3 314 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 BTBD6Q96KE9 485 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 SGCZQ96LD1 299 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 CCDC114Q96M63 670 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 CAMKK2Q96RR4 588 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 BICC1Q9H694 974 aaKnown RBP4.72□□□□□ -1.65
HERC4-204ENST00000395198 PRDM11Q9NQV5 511 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 ANGPTL3Q9Y5C1 460 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 TRAV6A0A075B6T7 132 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 GNAT3A8MTJ3 354 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 INO80B-WBP1J3KQ70 363 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 ENDOUP21128 410 aaKnown RBP4.72□□□□□ -1.65
HERC4-204ENST00000395198 ASMTP46597 345 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 HAAOP46952 286 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 PLTPP55058 493 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 NUCB2P80303 420 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 INAQ16352 499 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 CCDC149Q6ZUS6 474 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 GALNTL5Q7Z4T8 443 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 TMTC1Q8IUR5 882 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 ACMSDQ8TDX5 336 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 RNF139Q8WU17 664 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 SH3GL3Q99963 347 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 TSGA10Q9BZW7 698 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 MRPL46Q9H2W6 279 aaKnown RBP4.72□□□□□ -1.65
HERC4-204ENST00000395198 MMRN2Q9H8L6 949 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.72□□□□□ -1.65
HERC4-204ENST00000395198 KANK1Q14678 1352 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 SYNJ2BP-COX16A0A087WUM0 186 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 PDPK1O15530 556 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 ASGR2P07307 311 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 TFEBP19484 476 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 NPTX2P47972 431 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 DDR2Q16832 855 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 KRTCAP3Q53RY4 240 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 KRBOX4Q5JUW0 171 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 NLRP8Q86W28 1048 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 PASD1Q8IV76 773 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 NBPF15Q8N660 670 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 ZNF483Q8TF39 744 aaPredicted RBP4.72□□□□□ -1.65
HERC4-204ENST00000395198 ZNF845Q96IR2 970 aaPredicted RBP4.72□□□□□ -1.65
HERC4-204ENST00000395198 SEC16BQ96JE7 1060 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 FOXP3Q9BZS1 431 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 CWC15Q9P013 229 aaKnown RBP4.72□□□□□ -1.65
HERC4-204ENST00000395198 FAM198AQ9UFP1 575 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 HPCAL4Q9UM19 191 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 PARP3Q9Y6F1 533 aa4.72□□□□□ -1.65
HERC4-204ENST00000395198 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 DDX11L8A8MPP1 907 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 AOC2O75106 756 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 CAPNS1P04632 268 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 RPS6KB1P23443 525 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 MPSTP25325 297 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 SLC16A2P36021 539 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 PLCB3Q01970 1234 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 SUPT20HL1Q3ZLR7 823 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 RPUSD3Q6P087 351 aaKnown RBP4.71□□□□□ -1.65
HERC4-204ENST00000395198 BRINP3Q76B58 766 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 ZBTB46Q86UZ6 589 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 GBP7Q8N8V2 638 aaPredicted RBP4.71□□□□□ -1.65
HERC4-204ENST00000395198 PLBD2Q8NHP8 589 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 GIMAP5Q96F15 307 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 CMTM3Q96MX0 182 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 ADPGKQ9BRR6 497 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 LRRC4BQ9NT99 713 aa4.71□□□□□ -1.65
HERC4-204ENST00000395198 PTBP2Q9UKA9 531 aaKnown RBP4.71□□□□□ -1.65
HERC4-204ENST00000395198 GAPVD1Q14C86 1478 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 B4E171 279 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 GSK3AP49840 483 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 DCAF7P61962 342 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 PKDCCQ504Y2 493 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 TTBK2Q6IQ55 1244 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 ARRDC4Q8NCT1 418 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 NPLOC4Q8TAT6 608 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 EPSTI1Q96J88 318 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 UBXN10Q96LJ8 280 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 UQCC2Q9BRT2 126 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 AK5Q9Y6K8 562 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 PNMA6FA0A0J9YX94 578 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 IRAK2O43187 625 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms