RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 NT5C3AQ9H0P0 336 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 PCDHA12Q9UN75 941 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 SSU72P8A0A1W2PR75 194 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 RPS6KA5O75582 802 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 GCFC2P16383 781 aaKnown RBP18.06■□□□□ 0.48
VPS16-203ENST00000380469 ERCC3P19447 782 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 TRERF1Q96PN7 1200 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 NAP1L4Q99733 375 aaKnown RBP18.06■□□□□ 0.48
VPS16-203ENST00000380469 SWAP70Q9UH65 585 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 NHSQ6T4R5 1651 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 SSBP05455 408 aaKnown RBP eCLIP18.05■□□□□ 0.48
VPS16-203ENST00000380469 ADRA2BP18089 450 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 PAFAH1B1P43034 410 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 GTF2IP78347 998 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 MAPK8IP2Q13387 824 aaPredicted RBP18.05■□□□□ 0.48
VPS16-203ENST00000380469 FAM26FQ5R3K3 315 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 GLIS3Q8NEA6 775 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 SPATA4Q8NEY3 305 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 DNAJC19Q96DA6 116 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 GDAP1L1Q96MZ0 367 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 NOX5Q96PH1 765 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 TSPYL1Q9H0U9 437 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 FAM184BQ9ULE4 1060 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 TAF1LQ8IZX4 1826 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 KDM3AQ9Y4C1 1321 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 GNA14O95837 355 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 SERPINB2P05120 415 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 CLK2P49760 499 aaKnown RBP18.05■□□□□ 0.48
VPS16-203ENST00000380469 IRX5P78411 483 aaPredicted RBP18.05■□□□□ 0.48
VPS16-203ENST00000380469 ATP2B2Q01814 1243 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 ECM1Q16610 540 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 SLC9C1Q4G0N8 1177 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 TDRD12Q587J7 1177 aaKnown RBP18.05■□□□□ 0.48
VPS16-203ENST00000380469 GPATCH4Q5T3I0 446 aaKnown RBP18.05■□□□□ 0.48
VPS16-203ENST00000380469 CCDC65Q8IXS2 484 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 GSPT2Q8IYD1 628 aaKnown RBP18.05■□□□□ 0.48
VPS16-203ENST00000380469 RNF10Q8N5U6 811 aaKnown RBP18.05■□□□□ 0.48
VPS16-203ENST00000380469 HAS1Q92839 578 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 PSTPIP2Q9H939 334 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 LUC7LQ9NQ29 371 aaKnown RBP18.05■□□□□ 0.48
VPS16-203ENST00000380469 CEP72Q9P209 647 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 SERPINB13Q9UIV8 391 aa18.05■□□□□ 0.48
VPS16-203ENST00000380469 MYBL2P10244 700 aa18.04■□□□□ 0.48
VPS16-203ENST00000380469 NAP1L1P55209 391 aaKnown RBP18.04■□□□□ 0.48
VPS16-203ENST00000380469 RASSF7Q02833 373 aa18.04■□□□□ 0.48
VPS16-203ENST00000380469 GFPT1Q06210 699 aaPredicted RBP18.04■□□□□ 0.48
VPS16-203ENST00000380469 KCNMA1Q12791 1236 aa18.04■□□□□ 0.48
VPS16-203ENST00000380469 SFMBT2Q5VUG0 894 aa18.04■□□□□ 0.48
VPS16-203ENST00000380469 NFRKBQ6P4R8 1299 aa18.04■□□□□ 0.48
VPS16-203ENST00000380469 CLEC10AQ8IUN9 316 aa18.04■□□□□ 0.48
VPS16-203ENST00000380469 SYN2Q92777 582 aaPredicted RBP18.04■□□□□ 0.48
VPS16-203ENST00000380469 CEP63Q96MT8 703 aa18.04■□□□□ 0.48
VPS16-203ENST00000380469 ZBTB5O15062 677 aa18.04■□□□□ 0.48
VPS16-203ENST00000380469 PPP1R11O60927 126 aaPredicted RBP18.04■□□□□ 0.48
VPS16-203ENST00000380469 GGCXP38435 758 aa18.04■□□□□ 0.48
VPS16-203ENST00000380469 ASTE1Q2TB18 679 aaPredicted RBP18.04■□□□□ 0.48
VPS16-203ENST00000380469 ZCWPW2Q504Y3 356 aa18.04■□□□□ 0.48
VPS16-203ENST00000380469 CCDC155Q8N6L0 562 aa18.04■□□□□ 0.48
VPS16-203ENST00000380469 LRRC1Q9BTT6 524 aa18.04■□□□□ 0.48
VPS16-203ENST00000380469 TSKSQ9UJT2 592 aa18.04■□□□□ 0.48
VPS16-203ENST00000380469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.03■□□□□ 0.48
VPS16-203ENST00000380469 PRPF6O94906 941 aaKnown RBP18.03■□□□□ 0.48
VPS16-203ENST00000380469 SERPING1P05155 500 aa18.03■□□□□ 0.48
VPS16-203ENST00000380469 MATR3P43243 847 aaKnown RBP eCLIP18.03■□□□□ 0.48
VPS16-203ENST00000380469 HYIQ5T013 277 aa18.03■□□□□ 0.48
VPS16-203ENST00000380469 TTBK2Q6IQ55 1244 aa18.03■□□□□ 0.48
VPS16-203ENST00000380469 GPIHBP1Q8IV16 184 aa18.03■□□□□ 0.48
VPS16-203ENST00000380469 AENQ8WTP8 325 aaKnown RBP18.03■□□□□ 0.48
VPS16-203ENST00000380469 NLRC4Q9NPP4 1024 aa18.03■□□□□ 0.48
VPS16-203ENST00000380469 SUGT1Q9Y2Z0 365 aa18.03■□□□□ 0.48
VPS16-203ENST00000380469 ZC3H4Q9UPT8 1303 aaKnown RBP18.03■□□□□ 0.48
VPS16-203ENST00000380469 FOCADQ5VW36 1801 aa18.03■□□□□ 0.48
VPS16-203ENST00000380469 GOLGA6BA6NDN3 693 aa18.03■□□□□ 0.48
VPS16-203ENST00000380469 F8W031 263 aaPredicted RBP18.03■□□□□ 0.48
VPS16-203ENST00000380469 SLC16A2P36021 539 aa18.03■□□□□ 0.48
VPS16-203ENST00000380469 HGSNATQ68CP4 663 aa18.03■□□□□ 0.48
VPS16-203ENST00000380469 ANKRD13CQ8N6S4 541 aa18.03■□□□□ 0.48
VPS16-203ENST00000380469 GLT8D2Q9H1C3 349 aa18.03■□□□□ 0.48
VPS16-203ENST00000380469 MYO3BQ8WXR4 1341 aa18.02■□□□□ 0.48
VPS16-203ENST00000380469 MPHOSPH10O00566 681 aaKnown RBP18.02■□□□□ 0.48
VPS16-203ENST00000380469 CXCR5P32302 372 aa18.02■□□□□ 0.48
VPS16-203ENST00000380469 FAM83BQ5T0W9 1011 aa18.02■□□□□ 0.48
VPS16-203ENST00000380469 GJA10Q969M2 543 aa18.02■□□□□ 0.48
VPS16-203ENST00000380469 PSMB7Q99436 277 aa18.02■□□□□ 0.48
VPS16-203ENST00000380469 LSM14BQ9BX40 385 aaKnown RBP18.02■□□□□ 0.48
VPS16-203ENST00000380469 USP40Q9NVE5 1235 aa18.02■□□□□ 0.48
VPS16-203ENST00000380469 TBC1D7Q9P0N9 293 aa18.02■□□□□ 0.48
VPS16-203ENST00000380469 KIAA1024Q9UPX6 916 aa18.02■□□□□ 0.48
VPS16-203ENST00000380469 USP17L10C9JJH3 530 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 RBAK-RBAKDNI3L0D1 243 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 PLA2G4BP0C869 781 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 SLC1A4P43007 532 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 KCTD1Q719H9 257 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 CRAMP1Q96RY5 1269 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 DDX4Q9NQI0 724 aaKnown RBP18.01■□□□□ 0.47
VPS16-203ENST00000380469 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.01■□□□□ 0.478e-6■■■■□ 20.4
VPS16-203ENST00000380469 LY75O60449 1722 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 MYH10P35580 1976 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 E9PMD0 336 aa18.01■□□□□ 0.47
VPS16-203ENST00000380469 RIMBP2O15034 1052 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms