RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 PRLRP16471 622 aa28.02■■■□□ 2.08
C9orf40-201ENST00000376854 MYOCDQ8IZQ8 938 aa28.02■■■□□ 2.08
C9orf40-201ENST00000376854 ZNF543Q08ER8 600 aa28.02■■■□□ 2.08
C9orf40-201ENST00000376854 PDXDC1Q6P996 788 aa28.02■■■□□ 2.08
C9orf40-201ENST00000376854 CACNA2D4Q7Z3S7 1137 aa28.02■■■□□ 2.08
C9orf40-201ENST00000376854 PROM2Q8N271 834 aa28.02■■■□□ 2.08
C9orf40-201ENST00000376854 MMGT1Q8N4V1 131 aa28.02■■■□□ 2.08
C9orf40-201ENST00000376854 PPP1R11O60927 126 aaPredicted RBP28.01■■■□□ 2.07
C9orf40-201ENST00000376854 TTLL1O95922 423 aa28.01■■■□□ 2.07
C9orf40-201ENST00000376854 IRX5P78411 483 aaPredicted RBP28.01■■■□□ 2.07
C9orf40-201ENST00000376854 COASYQ13057 564 aa28.01■■■□□ 2.07
C9orf40-201ENST00000376854 FOXR2Q6PJQ5 311 aa28.01■■■□□ 2.07
C9orf40-201ENST00000376854 CCDC155Q8N6L0 562 aa28.01■■■□□ 2.07
C9orf40-201ENST00000376854 HAS1Q92839 578 aa28.01■■■□□ 2.07
C9orf40-201ENST00000376854 SELENOOQ9BVL4 669 aa28.01■■■□□ 2.07
C9orf40-201ENST00000376854 MXD3Q9BW11 206 aa28.01■■■□□ 2.07
C9orf40-201ENST00000376854 MARCH6O60337 910 aa28.01■■■□□ 2.07
C9orf40-201ENST00000376854 MAGEA1P43355 309 aa28.01■■■□□ 2.07
C9orf40-201ENST00000376854 ZNF572Q7Z3I7 529 aaPredicted RBP28.01■■■□□ 2.07
C9orf40-201ENST00000376854 GJA10Q969M2 543 aa28.01■■■□□ 2.07
C9orf40-201ENST00000376854 DNAJC19Q96DA6 116 aa28.01■■■□□ 2.07
C9orf40-201ENST00000376854 OSBPL9Q96SU4 736 aa28.01■■■□□ 2.07
C9orf40-201ENST00000376854 ZC3H4Q9UPT8 1303 aaKnown RBP28■■■□□ 2.07
C9orf40-201ENST00000376854 CLK2P49760 499 aaKnown RBP28■■■□□ 2.07
C9orf40-201ENST00000376854 CUL5Q93034 780 aa28■■■□□ 2.07
C9orf40-201ENST00000376854 CRAMP1Q96RY5 1269 aa28■■■□□ 2.07
C9orf40-201ENST00000376854 CRACR2AQ9BSW2 395 aa28■■■□□ 2.07
C9orf40-201ENST00000376854 EDEM3Q9BZQ6 932 aa28■■■□□ 2.07
C9orf40-201ENST00000376854 COL4A3BPQ9Y5P4 624 aa28■■■□□ 2.07
C9orf40-201ENST00000376854 A0A0U1RQG5 324 aaPredicted RBP28■■■□□ 2.07
C9orf40-201ENST00000376854 FKBP3Q00688 224 aaKnown RBP28■■■□□ 2.07
C9orf40-201ENST00000376854 ITIH3Q06033 890 aa28■■■□□ 2.07
C9orf40-201ENST00000376854 NFRKBQ6P4R8 1299 aa28■■■□□ 2.07
C9orf40-201ENST00000376854 GOLGA6L1Q8N7Z2 621 aa28■■■□□ 2.07
C9orf40-201ENST00000376854 KCNMA1Q12791 1236 aa27.99■■■□□ 2.07
C9orf40-201ENST00000376854 SEPT2Q15019 361 aa27.99■■■□□ 2.07
C9orf40-201ENST00000376854 ZCWPW2Q504Y3 356 aa27.99■■■□□ 2.07
C9orf40-201ENST00000376854 TTBK2Q6IQ55 1244 aa27.99■■■□□ 2.07
C9orf40-201ENST00000376854 DDX4Q9NQI0 724 aaKnown RBP27.99■■■□□ 2.07
C9orf40-201ENST00000376854 PANK4Q9NVE7 773 aa27.99■■■□□ 2.07
C9orf40-201ENST00000376854 HYOU1Q9Y4L1 999 aa27.99■■■□□ 2.07
C9orf40-201ENST00000376854 PPEF1O14829 653 aaPredicted RBP27.98■■■□□ 2.07
C9orf40-201ENST00000376854 PJA2O43164 708 aa27.98■■■□□ 2.07
C9orf40-201ENST00000376854 PRPF6O94906 941 aaKnown RBP27.98■■■□□ 2.07
C9orf40-201ENST00000376854 TCP1P17987 556 aaKnown RBP27.98■■■□□ 2.07
C9orf40-201ENST00000376854 GFPT1Q06210 699 aaPredicted RBP27.98■■■□□ 2.07
C9orf40-201ENST00000376854 ASTE1Q2TB18 679 aaPredicted RBP27.98■■■□□ 2.07
C9orf40-201ENST00000376854 CCDC40Q4G0X9 1142 aa27.98■■■□□ 2.07
C9orf40-201ENST00000376854 CERS5Q8N5B7 392 aa27.98■■■□□ 2.07
C9orf40-201ENST00000376854 SPATA4Q8NEY3 305 aa27.98■■■□□ 2.07
C9orf40-201ENST00000376854 TRAF5O00463 557 aa27.98■■■□□ 2.07
C9orf40-201ENST00000376854 MRPL12P52815 198 aaKnown RBP27.98■■■□□ 2.07
C9orf40-201ENST00000376854 FAM26FQ5R3K3 315 aa27.98■■■□□ 2.07
C9orf40-201ENST00000376854 PCDHA12Q9UN75 941 aa27.98■■■□□ 2.07
C9orf40-201ENST00000376854 SSU72P8A0A1W2PR75 194 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 RPS6KA5O75582 802 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 TRIM37O94972 964 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 SSBP05455 408 aaKnown RBP eCLIP27.97■■■□□ 2.07
C9orf40-201ENST00000376854 IVLP07476 585 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 MAPK8IP2Q13387 824 aaPredicted RBP27.97■■■□□ 2.07
C9orf40-201ENST00000376854 ANKRD13CQ8N6S4 541 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 AFAP1L1Q8TED9 768 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 PSMB7Q99436 277 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 HINFPQ9BQA5 517 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 LRRC1Q9BTT6 524 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 SALL4Q9UJQ4 1053 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 LTBP1Q14766 1721 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 SLC16A2P36021 539 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 GGCXP38435 758 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 RASSF7Q02833 373 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 EZH2Q15910 746 aaKnown RBP27.97■■■□□ 2.07
C9orf40-201ENST00000376854 TDRD12Q587J7 1177 aaKnown RBP27.97■■■□□ 2.07
C9orf40-201ENST00000376854 HGSNATQ68CP4 663 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 BMP2KQ9NSY1 1161 aaPredicted RBP27.97■■■□□ 2.07
C9orf40-201ENST00000376854 SERPINB13Q9UIV8 391 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 FAM184BQ9ULE4 1060 aa27.97■■■□□ 2.07
C9orf40-201ENST00000376854 KLRG2A4D1S0 409 aaPredicted RBP27.96■■■□□ 2.07
C9orf40-201ENST00000376854 CXCR5P32302 372 aa27.96■■■□□ 2.07
C9orf40-201ENST00000376854 CCDC181Q5TID7 509 aa27.96■■■□□ 2.07
C9orf40-201ENST00000376854 AENQ8WTP8 325 aaKnown RBP27.96■■■□□ 2.07
C9orf40-201ENST00000376854 HDAC7Q8WUI4 952 aa27.96■■■□□ 2.07
C9orf40-201ENST00000376854 RIN2Q8WYP3 895 aaPredicted RBP27.96■■■□□ 2.07
C9orf40-201ENST00000376854 PSTPIP2Q9H939 334 aa27.96■■■□□ 2.07
C9orf40-201ENST00000376854 NLRC4Q9NPP4 1024 aa27.96■■■□□ 2.07
C9orf40-201ENST00000376854 TRPC5Q9UL62 973 aaPredicted RBP27.96■■■□□ 2.07
C9orf40-201ENST00000376854 GCFC2P16383 781 aaKnown RBP27.96■■■□□ 2.07
C9orf40-201ENST00000376854 SLC1A4P43007 532 aa27.96■■■□□ 2.07
C9orf40-201ENST00000376854 ARHGAP27Q6ZUM4 889 aa27.96■■■□□ 2.07
C9orf40-201ENST00000376854 NT5C3AQ9H0P0 336 aa27.96■■■□□ 2.07
C9orf40-201ENST00000376854 TBC1D7Q9P0N9 293 aa27.96■■■□□ 2.07
C9orf40-201ENST00000376854 CEP72Q9P209 647 aa27.96■■■□□ 2.07
C9orf40-201ENST00000376854 KDM3AQ9Y4C1 1321 aa27.95■■■□□ 2.07
C9orf40-201ENST00000376854 ZBTB5O15062 677 aa27.95■■■□□ 2.07
C9orf40-201ENST00000376854 MATR3P43243 847 aaKnown RBP eCLIP27.95■■■□□ 2.07
C9orf40-201ENST00000376854 NOX5Q96PH1 765 aa27.95■■■□□ 2.07
C9orf40-201ENST00000376854 SWAP70Q9UH65 585 aa27.95■■■□□ 2.07
C9orf40-201ENST00000376854 USP17L10C9JJH3 530 aa27.95■■■□□ 2.06
C9orf40-201ENST00000376854 NCK2O43639 380 aa27.95■■■□□ 2.06
C9orf40-201ENST00000376854 SLURP2P0DP57 97 aa27.95■■■□□ 2.06
C9orf40-201ENST00000376854 SLC27A3Q5K4L6 730 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms